RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 H0YGX0 51 aa9.82□□□□□ -0.84
PTCD1-201ENST00000292478 CITED2Q99967 270 aaPredicted RBP9.82□□□□□ -0.84
PTCD1-201ENST00000292478 CACNA1HO95180 2353 aa9.82□□□□□ -0.84
PTCD1-201ENST00000292478 EIF4EBP1Q13541 118 aaPredicted RBP9.82□□□□□ -0.84
PTCD1-201ENST00000292478 CDPF1Q6NVV7 123 aa9.82□□□□□ -0.84
PTCD1-201ENST00000292478 LINC00173Q6ZV60 143 aa9.82□□□□□ -0.84
PTCD1-201ENST00000292478 Q71RC1 249 aaPredicted RBP9.82□□□□□ -0.84
PTCD1-201ENST00000292478 H3BQ85 93 aa9.82□□□□□ -0.84
PTCD1-201ENST00000292478 ORMDL1Q9P0S3 153 aa9.82□□□□□ -0.84
PTCD1-201ENST00000292478 A0A0J9YY99 117 aa9.81□□□□□ -0.84
PTCD1-201ENST00000292478 GYPEP15421 78 aa9.81□□□□□ -0.84
PTCD1-201ENST00000292478 TRBV7-3A0A075B6L6 115 aa9.81□□□□□ -0.84
PTCD1-201ENST00000292478 LOXL1Q08397 574 aaPredicted RBP9.81□□□□□ -0.84
PTCD1-201ENST00000292478 A0A0J9YXV3 536 aa9.81□□□□□ -0.84
PTCD1-201ENST00000292478 ODF3Q96PU9 254 aa9.81□□□□□ -0.84
PTCD1-201ENST00000292478 C11orf86A6NJI1 115 aa9.81□□□□□ -0.84
PTCD1-201ENST00000292478 E9PLD3 99 aa9.81□□□□□ -0.84
PTCD1-201ENST00000292478 LRRC75A-AS1Q8N1F1 130 aa9.81□□□□□ -0.84
PTCD1-201ENST00000292478 PIFOQ8TCI5 191 aa9.81□□□□□ -0.84
PTCD1-201ENST00000292478 PRO3102Q9H379 93 aa9.81□□□□□ -0.84
PTCD1-201ENST00000292478 PROP1O75360 226 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 BRWD1-AS2P59051 145 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 NTN5Q8WTR8 489 aaPredicted RBP9.8□□□□□ -0.84
PTCD1-201ENST00000292478 BAALCQ8WXS3 180 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 A0A0J9YX75 114 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 AMTNQ6UX39 209 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 ANKRD29Q8N6D5 301 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 C1orf43Q9BWL3 253 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 SPANXCQ9NY87 97 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 SHANK1Q9Y566 2161 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 SPRY2O43597 315 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 WISP2O76076 250 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 CLPSL2Q6UWE3 100 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 BAALC-AS2P0C853 105 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 Q6ZPA2 131 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 IGKV2D-24A0A075B6R9 120 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 A0A1B0GXF2 115 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 LMO4P61968 165 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 HAMPP81172 84 aa9.8□□□□□ -0.84
PTCD1-201ENST00000292478 COX7A2LO14548 114 aa9.79□□□□□ -0.84
PTCD1-201ENST00000292478 COX7B2Q8TF08 81 aa9.79□□□□□ -0.84
PTCD1-201ENST00000292478 Q6ZQT7 251 aa9.79□□□□□ -0.84
PTCD1-201ENST00000292478 MUSTN1Q8IVN3 82 aa9.79□□□□□ -0.84
PTCD1-201ENST00000292478 INSL3P51460 131 aa9.78□□□□□ -0.84
PTCD1-201ENST00000292478 ZGRF1Q86YA3 2104 aa9.78□□□□□ -0.84
PTCD1-201ENST00000292478 SPATA12Q7Z6I5 190 aa9.78□□□□□ -0.84
PTCD1-201ENST00000292478 C5orf38Q86SI9 138 aa9.78□□□□□ -0.84
PTCD1-201ENST00000292478 PRORYQ9H606 182 aa9.78□□□□□ -0.84
PTCD1-201ENST00000292478 EP400Q96L91 3159 aa9.78□□□□□ -0.84
PTCD1-201ENST00000292478 IGF1P05019 195 aa9.78□□□□□ -0.84
PTCD1-201ENST00000292478 CXCL5P42830 114 aa9.78□□□□□ -0.84
PTCD1-201ENST00000292478 TRAV4A0A0B4J268 109 aa9.78□□□□□ -0.84
PTCD1-201ENST00000292478 TRBV10-1A0A0K0K1A3 114 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 CLPSL1A2RUU4 121 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 CCL25O15444 150 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 CRYGBP07316 175 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 CCDC140Q96MF4 163 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 MED13Q9UHV7 2174 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 EBI3Q14213 229 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 SND1-IT1Q9HBX3 110 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 IGLV2-8P01709 118 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 ZNF295-AS1Q8N0V1 137 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 A4D1N5 150 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 ODF1Q14990 250 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 UNQ9165/PRO28630Q6UXU0 137 aa9.77□□□□□ -0.85
PTCD1-201ENST00000292478 LGALS9O00182 355 aa9.76□□□□□ -0.85
PTCD1-201ENST00000292478 TMEM263Q8WUH6 116 aaKnown RBP9.76□□□□□ -0.85
PTCD1-201ENST00000292478 PRB1P04280 392 aa9.76□□□□□ -0.85
PTCD1-201ENST00000292478 HHLA3Q9XRX5 114 aa9.76□□□□□ -0.85
PTCD1-201ENST00000292478 TDRG1Q3Y452 100 aa9.76□□□□□ -0.85
PTCD1-201ENST00000292478 C15orf53Q8NAA6 179 aa9.76□□□□□ -0.85
PTCD1-201ENST00000292478 MLST8Q9BVC4 326 aa9.75□□□□□ -0.85
PTCD1-201ENST00000292478 RPL39P62891 51 aaKnown RBP9.75□□□□□ -0.85
PTCD1-201ENST00000292478 C20orf203Q8NBC4 194 aa9.75□□□□□ -0.85
PTCD1-201ENST00000292478 VSIG2Q96IQ7 327 aa9.75□□□□□ -0.85
PTCD1-201ENST00000292478 CAMK2N2Q96S95 79 aa9.75□□□□□ -0.85
PTCD1-201ENST00000292478 TNRC6AQ8NDV7 1962 aaKnown RBP9.75□□□□□ -0.85
PTCD1-201ENST00000292478 ADAMTS9Q9P2N4 1935 aa9.75□□□□□ -0.85
PTCD1-201ENST00000292478 CCL18P55774 89 aa9.74□□□□□ -0.85
PTCD1-201ENST00000292478 C10orf142B7Z368 130 aa9.74□□□□□ -0.85
PTCD1-201ENST00000292478 LY6LH3BQJ8 138 aa9.74□□□□□ -0.85
PTCD1-201ENST00000292478 IGLC6P0CF74 106 aa9.74□□□□□ -0.85
PTCD1-201ENST00000292478 NRGNQ92686 78 aa9.74□□□□□ -0.85
PTCD1-201ENST00000292478 PCNX1Q96RV3 2341 aa9.74□□□□□ -0.85
PTCD1-201ENST00000292478 TRBV12-3P01733 135 aa9.74□□□□□ -0.85
PTCD1-201ENST00000292478 MUC22E2RYF6 1773 aaPredicted RBP9.74□□□□□ -0.85
PTCD1-201ENST00000292478 IGHV1-58A0A0C4DH39 117 aa9.73□□□□□ -0.85
PTCD1-201ENST00000292478 TINCRA0A1B0GVN0 87 aa9.73□□□□□ -0.85
PTCD1-201ENST00000292478 TECTAO75443 2155 aa9.73□□□□□ -0.85
PTCD1-201ENST00000292478 FXYD2P54710 66 aa9.73□□□□□ -0.85
PTCD1-201ENST00000292478 HIST2H2BCQ6DN03 193 aa9.73□□□□□ -0.85
PTCD1-201ENST00000292478 TMEM61Q8N0U2 210 aa9.73□□□□□ -0.85
PTCD1-201ENST00000292478 TRACP01848 142 aa9.73□□□□□ -0.85
PTCD1-201ENST00000292478 MAP6D1Q9H9H5 199 aa9.73□□□□□ -0.85
PTCD1-201ENST00000292478 UBE2BP63146 152 aa9.72□□□□□ -0.85
PTCD1-201ENST00000292478 MDFICQ9P1T7 246 aa9.72□□□□□ -0.85
PTCD1-201ENST00000292478 NBASA2RRP1 2371 aa9.72□□□□□ -0.85
PTCD1-201ENST00000292478 LINC01620Q4KN68 170 aa9.72□□□□□ -0.85
PTCD1-201ENST00000292478 OPRPNQ99935 248 aaPredicted RBP9.72□□□□□ -0.85
PTCD1-201ENST00000292478 NUP210LQ5VU65 1888 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms