RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZNF493Q6ZR52 646 aa9.79□□□□□ -0.84
SLC6A1-201ENST00000287766 DYNAPQ8N1N2 210 aa9.79□□□□□ -0.84
SLC6A1-201ENST00000287766 A4D1N5 150 aa9.78□□□□□ -0.84
SLC6A1-201ENST00000287766 OOSP1A8MZH6 123 aa9.78□□□□□ -0.84
SLC6A1-201ENST00000287766 IGHV3-16A0A0C4DH30 117 aa9.77□□□□□ -0.85
SLC6A1-201ENST00000287766 TMEM141Q96I45 108 aa9.77□□□□□ -0.85
SLC6A1-201ENST00000287766 CLUHP3Q96NS8 147 aa9.77□□□□□ -0.85
SLC6A1-201ENST00000287766 FRYLO94915 3013 aa9.77□□□□□ -0.85
SLC6A1-201ENST00000287766 IGHV3-38A0A0C4DH36 116 aa9.77□□□□□ -0.85
SLC6A1-201ENST00000287766 MT-ATP8P03928 68 aa9.77□□□□□ -0.85
SLC6A1-201ENST00000287766 UBE2E2Q96LR5 201 aa9.77□□□□□ -0.85
SLC6A1-201ENST00000287766 MSRB2Q9Y3D2 182 aa9.77□□□□□ -0.85
SLC6A1-201ENST00000287766 F6UB75 175 aa9.76□□□□□ -0.85
SLC6A1-201ENST00000287766 NXPH4O95158 308 aa9.76□□□□□ -0.85
SLC6A1-201ENST00000287766 OVOL2Q9BRP0 275 aa9.76□□□□□ -0.85
SLC6A1-201ENST00000287766 COX6B1P14854 86 aa9.76□□□□□ -0.85
SLC6A1-201ENST00000287766 UBE2E1P51965 193 aa9.76□□□□□ -0.85
SLC6A1-201ENST00000287766 TRPT1Q86TN4 253 aaKnown RBP9.76□□□□□ -0.85
SLC6A1-201ENST00000287766 MGAQ8IWI9 3026 aa9.76□□□□□ -0.85
SLC6A1-201ENST00000287766 DEFB1P60022 68 aa9.76□□□□□ -0.85
SLC6A1-201ENST00000287766 SPINK13Q1W4C9 94 aa9.76□□□□□ -0.85
SLC6A1-201ENST00000287766 IGKV3D-7A0A0C4DH55 119 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 C8orf31Q8N9H6 132 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 FAM110DQ8TAY7 271 aaPredicted RBP9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 ZFYVE26Q68DK2 2539 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 BAALC-AS2P0C853 105 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 KLK9Q9UKQ9 250 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 REV3LO60673 3130 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 PRAC2D3DTV9 90 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 IGHG4P01861 327 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 FOXE3Q13461 319 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 TRBV7-1A0A0A6YYK4 115 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 A0A1B0GX51 115 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 LINC01620Q4KN68 170 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 AGPAT4-IT1Q9H0P7 198 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 MYO15AQ9UKN7 3530 aa9.75□□□□□ -0.85
SLC6A1-201ENST00000287766 CTSGP08311 255 aa9.74□□□□□ -0.85
SLC6A1-201ENST00000287766 IGHV7-81A0A0B4J1V7 117 aa9.74□□□□□ -0.85
SLC6A1-201ENST00000287766 RBMY1FQ15415 496 aaKnown RBP9.74□□□□□ -0.85
SLC6A1-201ENST00000287766 TRAV12-2A0A075B6T6 113 aa9.74□□□□□ -0.85
SLC6A1-201ENST00000287766 ZFP36P26651 326 aaKnown RBP9.74□□□□□ -0.85
SLC6A1-201ENST00000287766 CRYGCP07315 174 aa9.73□□□□□ -0.85
SLC6A1-201ENST00000287766 Q6ZUT4 128 aa9.73□□□□□ -0.85
SLC6A1-201ENST00000287766 RBAKDNA6NC62 111 aa9.73□□□□□ -0.85
SLC6A1-201ENST00000287766 HOXD3P31249 432 aaPredicted RBP9.73□□□□□ -0.85
SLC6A1-201ENST00000287766 LOXL1Q08397 574 aaPredicted RBP9.73□□□□□ -0.85
SLC6A1-201ENST00000287766 ZNF415Q09FC8 603 aa9.73□□□□□ -0.85
SLC6A1-201ENST00000287766 TET2Q6N021 2002 aaPredicted RBP9.73□□□□□ -0.85
SLC6A1-201ENST00000287766 I3L3M4 83 aa9.73□□□□□ -0.85
SLC6A1-201ENST00000287766 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
SLC6A1-201ENST00000287766 CFHR4Q92496 578 aa9.73□□□□□ -0.85
SLC6A1-201ENST00000287766 LINC00574Q9H8X3 128 aa9.73□□□□□ -0.85
SLC6A1-201ENST00000287766 IGLV11-55A0A075B6I3 123 aa9.72□□□□□ -0.85
SLC6A1-201ENST00000287766 NBEAQ8NFP9 2946 aa9.72□□□□□ -0.85
SLC6A1-201ENST00000287766 POLQO75417 2590 aa9.72□□□□□ -0.85
SLC6A1-201ENST00000287766 DSPP15924 2871 aaKnown RBP9.72□□□□□ -0.85
SLC6A1-201ENST00000287766 J3KT08 172 aa9.72□□□□□ -0.85
SLC6A1-201ENST00000287766 MUSTN1Q8IVN3 82 aa9.72□□□□□ -0.85
SLC6A1-201ENST00000287766 LINC00310P59036 64 aa9.72□□□□□ -0.85
SLC6A1-201ENST00000287766 RPL39LQ96EH5 51 aaKnown RBP9.72□□□□□ -0.85
SLC6A1-201ENST00000287766 HIGD1BQ9P298 99 aa9.72□□□□□ -0.85
SLC6A1-201ENST00000287766 ADORA2A-AS1P86434 159 aa9.71□□□□□ -0.85
SLC6A1-201ENST00000287766 FANCD2OSQ96PS1 177 aa9.71□□□□□ -0.85
SLC6A1-201ENST00000287766 NBL1P41271 181 aa9.71□□□□□ -0.86
SLC6A1-201ENST00000287766 C19orf71A6NCJ1 209 aa9.71□□□□□ -0.86
SLC6A1-201ENST00000287766 GNRH2O43555 120 aa9.71□□□□□ -0.86
SLC6A1-201ENST00000287766 PEMTQ9UBM1 199 aa9.71□□□□□ -0.86
SLC6A1-201ENST00000287766 IGF2-ASQ6U949 168 aa9.7□□□□□ -0.86
SLC6A1-201ENST00000287766 MBD6Q96DN6 1003 aa9.7□□□□□ -0.86
SLC6A1-201ENST00000287766 A0A0J9YXV3 536 aa9.7□□□□□ -0.86
SLC6A1-201ENST00000287766 LINC01548A6NM66 108 aa9.7□□□□□ -0.86
SLC6A1-201ENST00000287766 PF4P02776 101 aa9.7□□□□□ -0.86
SLC6A1-201ENST00000287766 SPANXDQ9BXN6 97 aa9.7□□□□□ -0.86
SLC6A1-201ENST00000287766 COL4A2P08572 1712 aa9.7□□□□□ -0.86
SLC6A1-201ENST00000287766 CTRLP40313 264 aa9.7□□□□□ -0.86
SLC6A1-201ENST00000287766 PRB2P02812 416 aaPredicted RBP9.7□□□□□ -0.86
SLC6A1-201ENST00000287766 DEFB131AP59861 70 aa9.7□□□□□ -0.86
SLC6A1-201ENST00000287766 SP5Q6BEB4 398 aaPredicted RBP9.7□□□□□ -0.86
SLC6A1-201ENST00000287766 IGHV1-69DA0A0B4J2H0 117 aa9.69□□□□□ -0.86
SLC6A1-201ENST00000287766 IGHV1-69P01742 117 aa9.69□□□□□ -0.86
SLC6A1-201ENST00000287766 ODF1Q14990 250 aa9.69□□□□□ -0.86
SLC6A1-201ENST00000287766 Q8N9W7 124 aa9.69□□□□□ -0.86
SLC6A1-201ENST00000287766 CRLF1O75462 422 aa9.69□□□□□ -0.86
SLC6A1-201ENST00000287766 SUMO4Q6EEV6 95 aa9.69□□□□□ -0.86
SLC6A1-201ENST00000287766 Q71RC1 249 aaPredicted RBP9.69□□□□□ -0.86
SLC6A1-201ENST00000287766 MLST8Q9BVC4 326 aa9.69□□□□□ -0.86
SLC6A1-201ENST00000287766 DAND5Q8N907 189 aa9.69□□□□□ -0.86
SLC6A1-201ENST00000287766 ZNRF2Q8NHG8 242 aa9.69□□□□□ -0.86
SLC6A1-201ENST00000287766 TMEM243Q9BU79 118 aa9.69□□□□□ -0.86
SLC6A1-201ENST00000287766 DAZ1Q9NQZ3 744 aaKnown RBP9.69□□□□□ -0.86
SLC6A1-201ENST00000287766 A0A1B0GXF2 115 aa9.68□□□□□ -0.86
SLC6A1-201ENST00000287766 ZNF80P51504 273 aaPredicted RBP9.68□□□□□ -0.86
SLC6A1-201ENST00000287766 BLCAPP62952 87 aa9.68□□□□□ -0.86
SLC6A1-201ENST00000287766 ZFP2Q6ZN57 461 aa9.68□□□□□ -0.86
SLC6A1-201ENST00000287766 NDUFV3P56181 108 aaKnown RBP9.68□□□□□ -0.86
SLC6A1-201ENST00000287766 Q9H8V8 135 aa9.68□□□□□ -0.86
SLC6A1-201ENST00000287766 TCTEX1D4Q5JR98 221 aa9.68□□□□□ -0.86
SLC6A1-201ENST00000287766 PRSS22Q9GZN4 317 aa9.68□□□□□ -0.86
SLC6A1-201ENST00000287766 SPANXB1Q9NS25 103 aaPredicted RBP9.68□□□□□ -0.86
SLC6A1-201ENST00000287766 FRYQ5TBA9 3013 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms