RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 TSPAN13O95857 204 aa9.9□□□□□ -0.82
SLC28A1-201ENST00000286749 CD7P09564 240 aa9.9□□□□□ -0.82
SLC28A1-201ENST00000286749 RPL32P62910 135 aaKnown RBP9.9□□□□□ -0.82
SLC28A1-201ENST00000286749 LOC107984156A0A0G2JMH3 177 aa9.9□□□□□ -0.82
SLC28A1-201ENST00000286749 APOMO95445 188 aa9.9□□□□□ -0.82
SLC28A1-201ENST00000286749 HERVK_113P61574 105 aa9.9□□□□□ -0.82
SLC28A1-201ENST00000286749 LY6DQ14210 128 aa9.9□□□□□ -0.82
SLC28A1-201ENST00000286749 ARL17AQ8IVW1 177 aa9.9□□□□□ -0.82
SLC28A1-201ENST00000286749 SPATA25Q9BR10 227 aa9.9□□□□□ -0.82
SLC28A1-201ENST00000286749 VPS13CQ709C8 3753 aa9.9□□□□□ -0.83
SLC28A1-201ENST00000286749 A6NDX4 124 aa9.89□□□□□ -0.83
SLC28A1-201ENST00000286749 BRI3O95415 125 aa9.89□□□□□ -0.83
SLC28A1-201ENST00000286749 DLX4Q92988 240 aaPredicted RBP9.89□□□□□ -0.83
SLC28A1-201ENST00000286749 KIR2DL4Q99706 377 aa9.89□□□□□ -0.83
SLC28A1-201ENST00000286749 A0A0J9YY99 117 aa9.89□□□□□ -0.83
SLC28A1-201ENST00000286749 SDHAF1A6NFY7 115 aa9.89□□□□□ -0.83
SLC28A1-201ENST00000286749 VCYO14598 125 aa9.89□□□□□ -0.83
SLC28A1-201ENST00000286749 PSMB2P49721 201 aa9.89□□□□□ -0.83
SLC28A1-201ENST00000286749 TSPEAR-AS2P59090 65 aa9.89□□□□□ -0.83
SLC28A1-201ENST00000286749 PAPPA-AS1Q5QFB9 102 aa9.89□□□□□ -0.83
SLC28A1-201ENST00000286749 FAM74A4Q5TZK3 123 aa9.89□□□□□ -0.83
SLC28A1-201ENST00000286749 MAP1AP78559 2803 aaPredicted RBP9.88□□□□□ -0.83
SLC28A1-201ENST00000286749 NDUFS8O00217 210 aa9.88□□□□□ -0.83
SLC28A1-201ENST00000286749 SMCPP49901 116 aaPredicted RBP9.88□□□□□ -0.83
SLC28A1-201ENST00000286749 TMEM170BQ5T4T1 132 aa9.88□□□□□ -0.83
SLC28A1-201ENST00000286749 CFAP126Q5VTH2 177 aa9.88□□□□□ -0.83
SLC28A1-201ENST00000286749 TMEM141Q96I45 108 aa9.88□□□□□ -0.83
SLC28A1-201ENST00000286749 IGLV1-40P01703 118 aa9.87□□□□□ -0.83
SLC28A1-201ENST00000286749 SCGB1A1P11684 91 aa9.87□□□□□ -0.83
SLC28A1-201ENST00000286749 ID1P41134 155 aa9.87□□□□□ -0.83
SLC28A1-201ENST00000286749 CLEC2AQ6UVW9 174 aa9.87□□□□□ -0.83
SLC28A1-201ENST00000286749 ZNRF2Q8NHG8 242 aa9.87□□□□□ -0.83
SLC28A1-201ENST00000286749 DCANP1Q8TF63 244 aa9.87□□□□□ -0.83
SLC28A1-201ENST00000286749 TIMM17AQ99595 171 aa9.87□□□□□ -0.83
SLC28A1-201ENST00000286749 PIMREGQ9BSJ6 248 aa9.87□□□□□ -0.83
SLC28A1-201ENST00000286749 ZNF256Q9Y2P7 627 aaPredicted RBP9.87□□□□□ -0.83
SLC28A1-201ENST00000286749 PKD1L2Q7Z442 2459 aa9.87□□□□□ -0.83
SLC28A1-201ENST00000286749 IGKV3-20P01619 116 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 TMEM95Q3KNT9 176 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 NDUFA11Q86Y39 141 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 C1QTNF4Q9BXJ3 329 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 UBE2D3P61077 147 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 UBE2D2P62837 147 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 ZNF418Q8TF45 676 aaPredicted RBP9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 USP24Q9UPU5 2620 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 TRAV12-2A0A075B6T6 113 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 TRBV27A0A0K0K1C4 114 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 LGALS9O00182 355 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 ZNF876PQ49A33 203 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 MDFICQ9P1T7 246 aa9.86□□□□□ -0.83
SLC28A1-201ENST00000286749 EPG5Q9HCE0 2579 aa9.85□□□□□ -0.83
SLC28A1-201ENST00000286749 IGHV3-30P01768 117 aa9.85□□□□□ -0.83
SLC28A1-201ENST00000286749 IGHV3-30-5P0DP03 117 aa9.85□□□□□ -0.83
SLC28A1-201ENST00000286749 FOXI1Q12951 378 aa9.85□□□□□ -0.83
SLC28A1-201ENST00000286749 ZNF56Q15929 161 aa9.85□□□□□ -0.83
SLC28A1-201ENST00000286749 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
SLC28A1-201ENST00000286749 IGHV3-16A0A0C4DH30 117 aa9.85□□□□□ -0.83
SLC28A1-201ENST00000286749 COL12A1Q99715 3063 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 TRBV6-5A0A0K0K1A5 114 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 K7EMT4 169 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 CFC1BP0CG36 223 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 CFC1P0CG37 223 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 CFHR3Q02985 330 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 NFE4Q86UQ8 179 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 SLC25A29Q8N8R3 303 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 C9orf85Q96MD7 179 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 AMELXQ99217 191 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 J3QQQ9 107 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 C10orf105Q8TEF2 133 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 PTH2Q96A98 100 aa9.84□□□□□ -0.83
SLC28A1-201ENST00000286749 ATP6V0E2Q8NHE4 81 aa9.83□□□□□ -0.84
SLC28A1-201ENST00000286749 M0QY20 66 aa9.83□□□□□ -0.84
SLC28A1-201ENST00000286749 TCL1BO95988 128 aa9.83□□□□□ -0.84
SLC28A1-201ENST00000286749 TGFAP01135 160 aa9.83□□□□□ -0.84
SLC28A1-201ENST00000286749 LGALS3P17931 250 aaKnown RBP9.83□□□□□ -0.84
SLC28A1-201ENST00000286749 GNLYP22749 145 aa9.83□□□□□ -0.84
SLC28A1-201ENST00000286749 Q8N1Y9 231 aa9.83□□□□□ -0.84
SLC28A1-201ENST00000286749 LYRM7Q5U5X0 104 aa9.82□□□□□ -0.84
SLC28A1-201ENST00000286749 SYT8Q8NBV8 401 aa9.82□□□□□ -0.84
SLC28A1-201ENST00000286749 C10orf99Q6UWK7 81 aa9.82□□□□□ -0.84
SLC28A1-201ENST00000286749 CCL19Q99731 98 aa9.82□□□□□ -0.84
SLC28A1-201ENST00000286749 SPG11Q96JI7 2443 aa9.81□□□□□ -0.84
SLC28A1-201ENST00000286749 IGHV4-30-2A0A087WSY4 118 aa9.81□□□□□ -0.84
SLC28A1-201ENST00000286749 A0A0J9YX75 114 aa9.81□□□□□ -0.84
SLC28A1-201ENST00000286749 SPINK13Q1W4C9 94 aa9.81□□□□□ -0.84
SLC28A1-201ENST00000286749 NSUN5P1Q3KNT7 163 aa9.81□□□□□ -0.84
SLC28A1-201ENST00000286749 SORL1Q92673 2214 aa9.81□□□□□ -0.84
SLC28A1-201ENST00000286749 CSPG4Q6UVK1 2322 aa9.81□□□□□ -0.84
SLC28A1-201ENST00000286749 IGHV3-64A0A075B6Q5 118 aa9.81□□□□□ -0.84
SLC28A1-201ENST00000286749 CIDEAO60543 219 aa9.81□□□□□ -0.84
SLC28A1-201ENST00000286749 C10orf126Q8N4M7 172 aa9.81□□□□□ -0.84
SLC28A1-201ENST00000286749 CRYBG3Q68DQ2 2970 aa9.8□□□□□ -0.84
SLC28A1-201ENST00000286749 AVPP01185 164 aa9.8□□□□□ -0.84
SLC28A1-201ENST00000286749 MSMBP08118 114 aa9.8□□□□□ -0.84
SLC28A1-201ENST00000286749 P0DMU3 169 aa9.8□□□□□ -0.84
SLC28A1-201ENST00000286749 FAM231AP0DMU4 169 aa9.8□□□□□ -0.84
SLC28A1-201ENST00000286749 FAM231CP0DMU5 169 aa9.8□□□□□ -0.84
SLC28A1-201ENST00000286749 TRPT1Q86TN4 253 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms