RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 CAMPP49913 170 aa15.43■□□□□ 0.06
PDLIM3-203ENST00000284771 NANOS2P60321 138 aaKnown RBP15.43■□□□□ 0.06
PDLIM3-203ENST00000284771 DAD1P61803 113 aa15.43■□□□□ 0.06
PDLIM3-203ENST00000284771 RIGQ13278 110 aa15.43■□□□□ 0.06
PDLIM3-203ENST00000284771 UFSP1Q6NVU6 142 aa15.43■□□□□ 0.06
PDLIM3-203ENST00000284771 TRAV9-1A0A075B6T8 112 aa15.42■□□□□ 0.06
PDLIM3-203ENST00000284771 IGHV3-53P01767 116 aa15.42■□□□□ 0.06
PDLIM3-203ENST00000284771 LINC00315P59091 139 aa15.42■□□□□ 0.06
PDLIM3-203ENST00000284771 A8MWV9 139 aa15.41■□□□□ 0.06
PDLIM3-203ENST00000284771 ATP5L2Q7Z4Y8 100 aa15.41■□□□□ 0.06
PDLIM3-203ENST00000284771 TEX48A0A1B0GUV7 120 aa15.41■□□□□ 0.06
PDLIM3-203ENST00000284771 HBBP68871 147 aa15.41■□□□□ 0.06
PDLIM3-203ENST00000284771 Q6ZTC4 211 aa15.41■□□□□ 0.06
PDLIM3-203ENST00000284771 OR4C5Q8NGB2 326 aa15.41■□□□□ 0.06
PDLIM3-203ENST00000284771 TRBV24-1A0A075B6N3 115 aa15.4■□□□□ 0.06
PDLIM3-203ENST00000284771 IGHV3-73A0A0B4J1V6 119 aa15.4■□□□□ 0.06
PDLIM3-203ENST00000284771 TRAV4A0A0B4J268 109 aa15.4■□□□□ 0.06
PDLIM3-203ENST00000284771 FAM74A4Q5TZK3 123 aa15.4■□□□□ 0.06
PDLIM3-203ENST00000284771 AP1S3Q96PC3 154 aa15.4■□□□□ 0.06
PDLIM3-203ENST00000284771 TMEM191AQ9H0A3 160 aa15.39■□□□□ 0.05
PDLIM3-203ENST00000284771 TRGC1P0CF51 173 aa15.38■□□□□ 0.05
PDLIM3-203ENST00000284771 HOXA5P20719 270 aa15.38■□□□□ 0.05
PDLIM3-203ENST00000284771 Q6ZSN1 163 aa15.38■□□□□ 0.05
PDLIM3-203ENST00000284771 GATD1Q8NB37 220 aa15.38■□□□□ 0.05
PDLIM3-203ENST00000284771 A0A1B0GW15 77 aa15.37■□□□□ 0.05
PDLIM3-203ENST00000284771 FHL2Q14192 279 aa15.37■□□□□ 0.05
PDLIM3-203ENST00000284771 COLCA2A8K830 154 aa15.36■□□□□ 0.05
PDLIM3-203ENST00000284771 ZFP2Q6ZN57 461 aa15.36■□□□□ 0.05
PDLIM3-203ENST00000284771 AMN1Q8IY45 258 aa15.36■□□□□ 0.05
PDLIM3-203ENST00000284771 RNF185Q96GF1 192 aa15.36■□□□□ 0.05
PDLIM3-203ENST00000284771 DPH3P1Q9H4G8 78 aa15.36■□□□□ 0.05
PDLIM3-203ENST00000284771 ATP5G1P05496 136 aa15.35■□□□□ 0.05
PDLIM3-203ENST00000284771 RASL11AQ6T310 242 aa15.35■□□□□ 0.05
PDLIM3-203ENST00000284771 TMEM136Q6ZRR5 245 aa15.35■□□□□ 0.05
PDLIM3-203ENST00000284771 FAM210BQ96KR6 192 aa15.35■□□□□ 0.05
PDLIM3-203ENST00000284771 SMIM17P0DL12 118 aa15.34■□□□□ 0.05
PDLIM3-203ENST00000284771 RAB4AP20338 218 aa15.34■□□□□ 0.05
PDLIM3-203ENST00000284771 HTN3P15516 51 aa15.33■□□□□ 0.04
PDLIM3-203ENST00000284771 RAB4BP61018 213 aa15.33■□□□□ 0.04
PDLIM3-203ENST00000284771 FAM104BQ5XKR9 115 aa15.33■□□□□ 0.04
PDLIM3-203ENST00000284771 SMIM15Q7Z3B0 74 aa15.33■□□□□ 0.04
PDLIM3-203ENST00000284771 Q9UF83 564 aa15.33■□□□□ 0.04
PDLIM3-203ENST00000284771 GAS8-AS1O95177 125 aa15.32■□□□□ 0.04
PDLIM3-203ENST00000284771 S100A8P05109 93 aa15.32■□□□□ 0.04
PDLIM3-203ENST00000284771 MGPP08493 103 aa15.32■□□□□ 0.04
PDLIM3-203ENST00000284771 TRAV26-2A0A0B4J265 109 aa15.32■□□□□ 0.04
PDLIM3-203ENST00000284771 RHODO00212 210 aa15.32■□□□□ 0.04
PDLIM3-203ENST00000284771 GATA1P15976 413 aaPredicted RBP15.32■□□□□ 0.04
PDLIM3-203ENST00000284771 SLAQ13239 276 aa15.32■□□□□ 0.04
PDLIM3-203ENST00000284771 ZNF56Q15929 161 aa15.32■□□□□ 0.04
PDLIM3-203ENST00000284771 GNB1LQ9BYB4 327 aa15.32■□□□□ 0.04
PDLIM3-203ENST00000284771 TRGV4A0A0C4DH28 118 aa15.31■□□□□ 0.04
PDLIM3-203ENST00000284771 F5H768 121 aa15.31■□□□□ 0.04
PDLIM3-203ENST00000284771 CIDEAO60543 219 aa15.31■□□□□ 0.04
PDLIM3-203ENST00000284771 SLC25A29Q8N8R3 303 aa15.31■□□□□ 0.04
PDLIM3-203ENST00000284771 F5H697 171 aa15.3■□□□□ 0.04
PDLIM3-203ENST00000284771 MRPL51Q4U2R6 128 aaKnown RBP15.3■□□□□ 0.04
PDLIM3-203ENST00000284771 HHLA3Q9XRX5 114 aa15.3■□□□□ 0.04
PDLIM3-203ENST00000284771 CSMD3Q7Z407 3707 aa15.3■□□□□ 0.04
PDLIM3-203ENST00000284771 DEFB131BA0A096LNP1 70 aa15.29■□□□□ 0.04
PDLIM3-203ENST00000284771 SUMO4Q6EEV6 95 aa15.29■□□□□ 0.04
PDLIM3-203ENST00000284771 P0DMU3 169 aa15.28■□□□□ 0.04
PDLIM3-203ENST00000284771 FAM231AP0DMU4 169 aa15.28■□□□□ 0.04
PDLIM3-203ENST00000284771 FAM231CP0DMU5 169 aa15.28■□□□□ 0.04
PDLIM3-203ENST00000284771 VSIG2Q96IQ7 327 aa15.28■□□□□ 0.04
PDLIM3-203ENST00000284771 DNAH7Q8WXX0 4024 aa15.28■□□□□ 0.04
PDLIM3-203ENST00000284771 M0QY20 66 aa15.28■□□□□ 0.04
PDLIM3-203ENST00000284771 CRYBA4P53673 196 aa15.28■□□□□ 0.04
PDLIM3-203ENST00000284771 TRBV6-4A0A1B0GX49 114 aa15.27■□□□□ 0.03
PDLIM3-203ENST00000284771 SMKR1H3BMG3 65 aa15.27■□□□□ 0.03
PDLIM3-203ENST00000284771 HLA-DQA1P01909 254 aa15.27■□□□□ 0.03
PDLIM3-203ENST00000284771 PHLDA1Q8WV24 401 aaPredicted RBP15.27■□□□□ 0.03
PDLIM3-203ENST00000284771 PRO0255Q9UI72 69 aa15.27■□□□□ 0.03
PDLIM3-203ENST00000284771 TRAV10A0A0B4J240 114 aa15.26■□□□□ 0.03
PDLIM3-203ENST00000284771 COX19Q49B96 90 aa15.26■□□□□ 0.03
PDLIM3-203ENST00000284771 TRAV26-1A0A087WT03 109 aa15.25■□□□□ 0.03
PDLIM3-203ENST00000284771 A0A0J9YY99 117 aa15.25■□□□□ 0.03
PDLIM3-203ENST00000284771 LOC100131303A0A0U1RQF7 123 aa15.25■□□□□ 0.03
PDLIM3-203ENST00000284771 RAB5AP20339 215 aa15.25■□□□□ 0.03
PDLIM3-203ENST00000284771 KIAA1644Q3SXP7 199 aa15.25■□□□□ 0.03
PDLIM3-203ENST00000284771 MRPL18Q9H0U6 180 aaKnown RBP15.25■□□□□ 0.03
PDLIM3-203ENST00000284771 NCR2O95944 276 aa15.25■□□□□ 0.03
PDLIM3-203ENST00000284771 RPS10P46783 165 aaKnown RBP15.25■□□□□ 0.03
PDLIM3-203ENST00000284771 TRAPPC1Q9Y5R8 145 aa15.25■□□□□ 0.03
PDLIM3-203ENST00000284771 K7EQD1 137 aa15.24■□□□□ 0.03
PDLIM3-203ENST00000284771 MT-ND6P03923 174 aa15.24■□□□□ 0.03
PDLIM3-203ENST00000284771 D6R8Y8 96 aa15.23■□□□□ 0.03
PDLIM3-203ENST00000284771 APCSP02743 223 aa15.23■□□□□ 0.03
PDLIM3-203ENST00000284771 FABP9Q0Z7S8 132 aa15.23■□□□□ 0.03
PDLIM3-203ENST00000284771 FRZBQ92765 325 aa15.23■□□□□ 0.03
PDLIM3-203ENST00000284771 RPL39LQ96EH5 51 aaKnown RBP15.23■□□□□ 0.03
PDLIM3-203ENST00000284771 PAX4O43316 350 aa15.22■□□□□ 0.03
PDLIM3-203ENST00000284771 MRAP2Q96G30 205 aa15.22■□□□□ 0.03
PDLIM3-203ENST00000284771 CKS2P33552 79 aa15.22■□□□□ 0.03
PDLIM3-203ENST00000284771 NRACQ8N912 160 aa15.22■□□□□ 0.03
PDLIM3-203ENST00000284771 RHOHQ15669 191 aa15.21■□□□□ 0.03
PDLIM3-203ENST00000284771 NEXN-AS1Q8NBZ9 246 aa15.21■□□□□ 0.03
PDLIM3-203ENST00000284771 PHOX2AO14813 284 aa15.2■□□□□ 0.02
PDLIM3-203ENST00000284771 TRGC2P03986 189 aa15.2■□□□□ 0.02
PDLIM3-203ENST00000284771 STARD9Q9P2P6 4700 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms