RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 HILS1P60008 231 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 FBXL19-AS1Q494R0 122 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 IGFL2Q6UWQ7 119 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 LINC01548A6NM66 108 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 PLA2G5P39877 138 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 PLXNA3P51805 1871 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 LOXL1Q08397 574 aaPredicted RBP3.18□□□□□ -1.9
SCN3A-201ENST00000283254 DIRC1Q969H9 104 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 TRAV12-1A0A0B4J245 112 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 TRAV26-2A0A0B4J265 109 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 LYRM9A8MSI8 78 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 DEFB136Q30KP8 78 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 WFDC9Q8NEX5 89 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 SETXQ7Z333 2677 aaKnown RBP3.17□□□□□ -1.9
SCN3A-201ENST00000283254 A4D1N5 150 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 ATOX1O00244 68 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 PRR20EP86478 221 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 PRR20CP86479 221 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 PRR20DP86480 221 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 PRR20BP86481 221 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 PRR20AP86496 221 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 C11orf45Q8TAV5 145 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 ZNF706Q9Y5V0 76 aaPredicted RBP3.17□□□□□ -1.9
SCN3A-201ENST00000283254 IGHV7-81A0A0B4J1V7 117 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 NDUFA11Q86Y39 141 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 C1orf147Q96MC9 270 aaPredicted RBP3.17□□□□□ -1.9
SCN3A-201ENST00000283254 FGF23Q9GZV9 251 aaPredicted RBP3.17□□□□□ -1.9
SCN3A-201ENST00000283254 FLG2Q5D862 2391 aaPredicted RBP3.17□□□□□ -1.9
SCN3A-201ENST00000283254 ZSWIM8A7E2V4 1837 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 PTPRDP23468 1912 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 IGLV10-54A0A075B6I4 117 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 A0A0G2JRQ6 117 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 TINCRA0A1B0GVN0 87 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 C2orf70A6NJV1 201 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 CRYBA4P53673 196 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 SLURP1P55000 103 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 UFSP1Q6NVU6 142 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 ATP5EP2Q5VTU8 51 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 NFE4Q86UQ8 179 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 IGLV11-55A0A075B6I3 123 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 CTSGP08311 255 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 BAALC-AS2P0C853 105 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 DEFB125Q8N687 156 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 THSD7BQ9C0I4 1608 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 IGHV3-30P01768 117 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 IGHV3-33P01772 117 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 IGHV3-30-3P0DP02 117 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 IGHV3-30-5P0DP03 117 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 AMTNQ6UX39 209 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 CEND1Q8N111 149 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 HHLA3Q9XRX5 114 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 SIPA1L1O43166 1804 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 WDR86Q86TI4 376 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 MUSTN1Q8IVN3 82 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 DEFB104AQ8WTQ1 72 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 UPK3BQ9BT76 320 aa3.17□□□□□ -1.9
SCN3A-201ENST00000283254 NDUFC2O95298 119 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 IGKV1-17P01599 117 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 C16orf54Q6UWD8 224 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 TPSG1Q9NRR2 321 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 IGHV4-30-2A0A087WSY4 118 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 A0A1W2PPM0 123 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 RNF144BQ7Z419 303 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 PLXNA4Q9HCM2 1894 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.16□□□□□ -1.9
SCN3A-201ENST00000283254 IGKV2-29A2NJV5 120 aaPredicted RBP3.16□□□□□ -1.9
SCN3A-201ENST00000283254 SPRY2O43597 315 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 AJUBAQ96IF1 538 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 NOTCH1P46531 2555 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 NDUFS7O75251 213 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 COX7BP24311 80 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 C5orf38Q86SI9 138 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 ODF3Q96PU9 254 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 H3BT86 120 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 H7C423 109 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 HIGD2BQ4VC39 106 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 C14orf132Q9NPU4 83 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 IGHV1-58A0A0C4DH39 117 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 K7EP13 123 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 IGLV2-23P01705 113 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 TRBV12-3P01733 135 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 C5orf47Q569G3 176 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 ODF3L1Q8IXM7 274 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 C5orf56Q8N8D9 126 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 CYYR1Q96J86 154 aa3.16□□□□□ -1.9
SCN3A-201ENST00000283254 USP17L23D6RBM5 183 aa3.15□□□□□ -1.9
SCN3A-201ENST00000283254 FHL1Q13642 323 aa3.15□□□□□ -1.9
SCN3A-201ENST00000283254 CASC2Q6XLA1 102 aa3.15□□□□□ -1.9
SCN3A-201ENST00000283254 RNF138Q8WVD3 245 aa3.15□□□□□ -1.9
SCN3A-201ENST00000283254 CTSZQ9UBR2 303 aa3.15□□□□□ -1.9
SCN3A-201ENST00000283254 IGHV4-38-2P0DP08 117 aa3.15□□□□□ -1.9
SCN3A-201ENST00000283254 PRB4P10163 310 aaPredicted RBP3.15□□□□□ -1.9
SCN3A-201ENST00000283254 LINC00322Q6ZN03 302 aaPredicted RBP3.15□□□□□ -1.9
SCN3A-201ENST00000283254 DEFB105AQ8NG35 78 aa3.15□□□□□ -1.9
SCN3A-201ENST00000283254 C17orf77Q96MU5 243 aa3.15□□□□□ -1.9
SCN3A-201ENST00000283254 K7EIM0 57 aa3.15□□□□□ -1.9
SCN3A-201ENST00000283254 MLANAQ16655 118 aa3.15□□□□□ -1.9
SCN3A-201ENST00000283254 KLK12Q9UKR0 248 aa3.15□□□□□ -1.9
SCN3A-201ENST00000283254 DSCAML1Q8TD84 2053 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 TRBV10-2A0A0K0K1G8 114 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 903.1 ms