RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 ZNF56Q15929 161 aa6.93□□□□□ -1.3
HMGCLL1-201ENST00000274901 CEMP1Q6PRD7 247 aaPredicted RBP6.93□□□□□ -1.3
HMGCLL1-201ENST00000274901 UBE2WQ96B02 151 aa6.93□□□□□ -1.3
HMGCLL1-201ENST00000274901 DUX3Q96PT4 197 aa6.93□□□□□ -1.3
HMGCLL1-201ENST00000274901 IGHV3-64A0A075B6Q5 118 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 TRBV10-2A0A0K0K1G8 114 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 RBAKDNA6NC62 111 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 J3QQQ9 107 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 NBR2O15453 112 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 LINC00694P0DN24 101 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 ATXN8Q156A1 80 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 CLPSL1A2RUU4 121 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 LYNX1G3V0Z9 82 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 H7C423 109 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 LYNX1P0DP58 116 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 ZNF22P17026 224 aaPredicted RBP6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 DEFB1P60022 68 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 Q6ZSV7 163 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 LINC01600Q96MT4 127 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 OPRPNQ99935 248 aaPredicted RBP6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 LRBAP50851 2863 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 ZFHX3Q15911 3703 aa6.92□□□□□ -1.3
HMGCLL1-201ENST00000274901 A0A0B4J2C4 111 aa6.91□□□□□ -1.3
HMGCLL1-201ENST00000274901 BUB3O43684 328 aa6.91□□□□□ -1.3
HMGCLL1-201ENST00000274901 HERVK_113P61574 105 aa6.91□□□□□ -1.3
HMGCLL1-201ENST00000274901 Q1RN00 199 aa6.91□□□□□ -1.3
HMGCLL1-201ENST00000274901 NUP37Q8NFH4 326 aa6.91□□□□□ -1.3
HMGCLL1-201ENST00000274901 KAAG1Q9UBP8 84 aa6.91□□□□□ -1.3
HMGCLL1-201ENST00000274901 CSDC2Q9Y534 153 aaKnown RBP6.91□□□□□ -1.3
HMGCLL1-201ENST00000274901 PMVKQ15126 192 aa6.91□□□□□ -1.3
HMGCLL1-201ENST00000274901 ZFAND3Q9H8U3 227 aa6.91□□□□□ -1.3
HMGCLL1-201ENST00000274901 KLK5Q9Y337 293 aaPredicted RBP6.91□□□□□ -1.3
HMGCLL1-201ENST00000274901 OOSP1A8MZH6 123 aa6.9□□□□□ -1.3
HMGCLL1-201ENST00000274901 BSPH1Q075Z2 132 aa6.9□□□□□ -1.3
HMGCLL1-201ENST00000274901 C2orf82Q6UX34 121 aa6.9□□□□□ -1.3
HMGCLL1-201ENST00000274901 DPH3P1Q9H4G8 78 aa6.9□□□□□ -1.3
HMGCLL1-201ENST00000274901 EBI3Q14213 229 aa6.9□□□□□ -1.31
HMGCLL1-201ENST00000274901 POM121L12Q8N7R1 296 aa6.9□□□□□ -1.31
HMGCLL1-201ENST00000274901 CLEC2BQ92478 149 aa6.9□□□□□ -1.31
HMGCLL1-201ENST00000274901 C20orf173Q96LM9 149 aa6.9□□□□□ -1.31
HMGCLL1-201ENST00000274901 ADARB2-AS1A8MUL3 147 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 LGALS3P17931 250 aaKnown RBP6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 ZNF876PQ49A33 203 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 NRGNQ92686 78 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 RNF5Q99942 180 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 JPT2Q9H910 190 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 ITPR1Q14643 2758 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 TRBV7-7A0A0K0K1E9 115 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 FAM236AA0A1B0GUQ0 79 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 FAM236BA0A1B0GV22 79 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 LINC00315P59091 139 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 C9orf47Q6ZRZ4 202 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 NPBQ8NG41 125 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 TMEM126AQ9H061 195 aa6.89□□□□□ -1.31
HMGCLL1-201ENST00000274901 TMEM223A0PJW6 202 aa6.88□□□□□ -1.31
HMGCLL1-201ENST00000274901 GNRH2O43555 120 aa6.88□□□□□ -1.31
HMGCLL1-201ENST00000274901 UBE2E1P51965 193 aa6.88□□□□□ -1.31
HMGCLL1-201ENST00000274901 UCNP55089 124 aa6.88□□□□□ -1.31
HMGCLL1-201ENST00000274901 HES1Q14469 280 aa6.88□□□□□ -1.31
HMGCLL1-201ENST00000274901 TRGV11A0A075B6L2 103 aa6.88□□□□□ -1.31
HMGCLL1-201ENST00000274901 TRBV30A0A0K0K1B3 111 aa6.88□□□□□ -1.31
HMGCLL1-201ENST00000274901 M0R2P5 195 aa6.88□□□□□ -1.31
HMGCLL1-201ENST00000274901 ZFAND2AQ8N6M9 145 aa6.88□□□□□ -1.31
HMGCLL1-201ENST00000274901 SMCR5Q8TEV8 140 aa6.88□□□□□ -1.31
HMGCLL1-201ENST00000274901 RNASE6Q93091 150 aaKnown RBP6.88□□□□□ -1.31
HMGCLL1-201ENST00000274901 LY6DQ14210 128 aa6.87□□□□□ -1.31
HMGCLL1-201ENST00000274901 MRPL23Q16540 153 aaKnown RBP6.87□□□□□ -1.31
HMGCLL1-201ENST00000274901 LITAFQ99732 161 aa6.87□□□□□ -1.31
HMGCLL1-201ENST00000274901 PHLDA3Q9Y5J5 127 aa6.87□□□□□ -1.31
HMGCLL1-201ENST00000274901 ASH1LQ9NR48 2969 aaKnown RBP6.87□□□□□ -1.31
HMGCLL1-201ENST00000274901 RNASE3P12724 160 aaKnown RBP6.87□□□□□ -1.31
HMGCLL1-201ENST00000274901 PAPPA-AS1Q5QFB9 102 aa6.87□□□□□ -1.31
HMGCLL1-201ENST00000274901 ICOSQ9Y6W8 199 aa6.87□□□□□ -1.31
HMGCLL1-201ENST00000274901 KIF25-AS1Q9Y6Z4 181 aa6.87□□□□□ -1.31
HMGCLL1-201ENST00000274901 MED13LQ71F56 2210 aa6.87□□□□□ -1.31
HMGCLL1-201ENST00000274901 IGHV1-69DA0A0B4J2H0 117 aa6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 LEPROTO15243 131 aa6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 CD3EP07766 207 aa6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 S100A4P26447 101 aaKnown RBP6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 POLR2KP53803 58 aaKnown RBP6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 C15orf32Q32M92 178 aa6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 OXLD1Q5BKU9 147 aa6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 ADAMTSL4-AS1Q5T5F5 129 aa6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 EEF1AKMT3Q96AZ1 226 aa6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 DNAJC30Q96LL9 226 aa6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 SPTBN1Q01082 2364 aaKnown RBP6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 A0A0J9YXY3 114 aa6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 GRNP28799 593 aaKnown RBP6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 KLRB1Q12918 225 aa6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 DEFB121Q5J5C9 76 aa6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 METTL26Q96S19 204 aa6.86□□□□□ -1.31
HMGCLL1-201ENST00000274901 PKD1L2Q7Z442 2459 aa6.85□□□□□ -1.31
HMGCLL1-201ENST00000274901 PRRC2AP48634 2157 aaKnown RBP6.85□□□□□ -1.31
HMGCLL1-201ENST00000274901 CCL21O00585 134 aa6.85□□□□□ -1.31
HMGCLL1-201ENST00000274901 NDUFA7O95182 113 aa6.85□□□□□ -1.31
HMGCLL1-201ENST00000274901 NPC2P61916 151 aa6.85□□□□□ -1.31
HMGCLL1-201ENST00000274901 SUMO4Q6EEV6 95 aa6.85□□□□□ -1.31
HMGCLL1-201ENST00000274901 LINC01560Q8TB33 94 aa6.85□□□□□ -1.31
HMGCLL1-201ENST00000274901 CCDC140Q96MF4 163 aa6.85□□□□□ -1.31
HMGCLL1-201ENST00000274901 TIMM17AQ99595 171 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms