RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 CAMK2N2Q96S95 79 aa8.86□□□□□ -0.99
USP53-201ENST00000274030 HIVEP3Q5T1R4 2406 aa8.86□□□□□ -0.99
USP53-201ENST00000274030 ZFP2Q6ZN57 461 aa8.86□□□□□ -0.99
USP53-201ENST00000274030 TECTAO75443 2155 aa8.86□□□□□ -0.99
USP53-201ENST00000274030 ANKRD39Q53RE8 183 aa8.86□□□□□ -0.99
USP53-201ENST00000274030 HIST2H2BCQ6DN03 193 aa8.86□□□□□ -0.99
USP53-201ENST00000274030 GAGE12HA6NDE8 117 aa8.86□□□□□ -0.99
USP53-201ENST00000274030 ABCA2Q9BZC7 2435 aa8.86□□□□□ -0.99
USP53-201ENST00000274030 CCDC168Q8NDH2 2452 aa8.86□□□□□ -0.99
USP53-201ENST00000274030 K7EQD1 137 aa8.86□□□□□ -0.99
USP53-201ENST00000274030 GTSF1Q8WW33 167 aa8.86□□□□□ -0.99
USP53-201ENST00000274030 FAM167A-AS1Q96KT0 104 aa8.85□□□□□ -0.99
USP53-201ENST00000274030 C2orf70A6NJV1 201 aa8.85□□□□□ -0.99
USP53-201ENST00000274030 TEX22C9J3V5 150 aa8.85□□□□□ -0.99
USP53-201ENST00000274030 TRBV12-3P01733 135 aa8.85□□□□□ -0.99
USP53-201ENST00000274030 ATP5G1P05496 136 aa8.85□□□□□ -0.99
USP53-201ENST00000274030 SPART-AS1P0CW21 52 aa8.85□□□□□ -0.99
USP53-201ENST00000274030 DEFB135Q30KP9 77 aa8.85□□□□□ -0.99
USP53-201ENST00000274030 NCKAP5O14513 1909 aa8.85□□□□□ -0.99
USP53-201ENST00000274030 FRMD6-AS1P0C7T7 363 aa8.84□□□□□ -0.99
USP53-201ENST00000274030 IFITM1P13164 125 aa8.84□□□□□ -0.99
USP53-201ENST00000274030 PLA2G5P39877 138 aa8.84□□□□□ -0.99
USP53-201ENST00000274030 SH2D6Q7Z4S9 175 aa8.84□□□□□ -0.99
USP53-201ENST00000274030 C16orf74Q96GX8 76 aa8.84□□□□□ -0.99
USP53-201ENST00000274030 SIVA1O15304 175 aa8.84□□□□□ -0.99
USP53-201ENST00000274030 PROP1O75360 226 aa8.84□□□□□ -0.99
USP53-201ENST00000274030 MRPL23Q16540 153 aaKnown RBP8.84□□□□□ -0.99
USP53-201ENST00000274030 ANKRD29Q8N6D5 301 aa8.84□□□□□ -0.99
USP53-201ENST00000274030 SPANXA1Q9NS26 97 aa8.84□□□□□ -0.99
USP53-201ENST00000274030 MUSTN1Q8IVN3 82 aa8.84□□□□□ -0.99
USP53-201ENST00000274030 UNQ9165/PRO28630Q6UXU0 137 aa8.84□□□□□ -0.99
USP53-201ENST00000274030 IGLV1-47P01700 117 aa8.83□□□□□ -1
USP53-201ENST00000274030 LYPD6Q86Y78 171 aa8.83□□□□□ -1
USP53-201ENST00000274030 ODF3L1Q8IXM7 274 aa8.83□□□□□ -1
USP53-201ENST00000274030 ICOSQ9Y6W8 199 aa8.83□□□□□ -1
USP53-201ENST00000274030 TANC1Q9C0D5 1861 aa8.83□□□□□ -1
USP53-201ENST00000274030 SND1-IT1Q9HBX3 110 aa8.83□□□□□ -1
USP53-201ENST00000274030 ETDCA0A1B0GVM5 59 aa8.83□□□□□ -1
USP53-201ENST00000274030 IGLV2-14P01704 120 aa8.83□□□□□ -1
USP53-201ENST00000274030 COX7A2LO14548 114 aa8.83□□□□□ -1
USP53-201ENST00000274030 ORMDL1Q9P0S3 153 aa8.83□□□□□ -1
USP53-201ENST00000274030 A4D1N5 150 aa8.82□□□□□ -1
USP53-201ENST00000274030 TRACP01848 142 aa8.82□□□□□ -1
USP53-201ENST00000274030 PRB2P02812 416 aaPredicted RBP8.82□□□□□ -1
USP53-201ENST00000274030 TIMM17AQ99595 171 aa8.82□□□□□ -1
USP53-201ENST00000274030 CCL18P55774 89 aa8.82□□□□□ -1
USP53-201ENST00000274030 WI2-2373I1.2A0A1W2PRP0 233 aa8.82□□□□□ -1
USP53-201ENST00000274030 HHLA3Q9XRX5 114 aa8.82□□□□□ -1
USP53-201ENST00000274030 KIF26AQ9ULI4 1882 aaPredicted RBP8.81□□□□□ -1
USP53-201ENST00000274030 C2CD3Q4AC94 2353 aa8.81□□□□□ -1
USP53-201ENST00000274030 Q6ZSR3 168 aa8.81□□□□□ -1
USP53-201ENST00000274030 COX7B2Q8TF08 81 aa8.81□□□□□ -1
USP53-201ENST00000274030 F8W735 103 aaPredicted RBP8.81□□□□□ -1
USP53-201ENST00000274030 MDFICQ9P1T7 246 aa8.81□□□□□ -1
USP53-201ENST00000274030 HERV-K104P63124 156 aa8.81□□□□□ -1
USP53-201ENST00000274030 ZNF503Q96F45 646 aa8.81□□□□□ -1
USP53-201ENST00000274030 DAZ2Q13117 558 aaKnown RBP8.8□□□□□ -1
USP53-201ENST00000274030 IGF2-ASQ6U949 168 aa8.8□□□□□ -1
USP53-201ENST00000274030 DAZ4Q86SG3 579 aaKnown RBP8.8□□□□□ -1
USP53-201ENST00000274030 TMEM61Q8N0U2 210 aa8.8□□□□□ -1
USP53-201ENST00000274030 DAZ3Q9NR90 486 aaKnown RBP8.8□□□□□ -1
USP53-201ENST00000274030 WFDC11Q8NEX6 87 aa8.8□□□□□ -1
USP53-201ENST00000274030 Q8NA96 180 aa8.8□□□□□ -1
USP53-201ENST00000274030 SPRY4Q9C004 299 aa8.8□□□□□ -1
USP53-201ENST00000274030 TRBV7-3A0A075B6L6 115 aa8.79□□□□□ -1
USP53-201ENST00000274030 LINC01548A6NM66 108 aa8.79□□□□□ -1
USP53-201ENST00000274030 IGLL5B9A064 214 aa8.79□□□□□ -1
USP53-201ENST00000274030 NCR3O14931 201 aa8.79□□□□□ -1
USP53-201ENST00000274030 OPRPNQ99935 248 aaPredicted RBP8.79□□□□□ -1
USP53-201ENST00000274030 NCOA6Q14686 2063 aaPredicted RBP8.79□□□□□ -1
USP53-201ENST00000274030 TIRAPP58753 221 aa8.79□□□□□ -1
USP53-201ENST00000274030 DEFB125Q8N687 156 aa8.79□□□□□ -1
USP53-201ENST00000274030 PLXNB1O43157 2135 aa8.79□□□□□ -1
USP53-201ENST00000274030 C9orf47Q6ZRZ4 202 aa8.79□□□□□ -1
USP53-201ENST00000274030 KLK12Q9UKR0 248 aa8.79□□□□□ -1
USP53-201ENST00000274030 ADAMTS9Q9P2N4 1935 aa8.79□□□□□ -1
USP53-201ENST00000274030 PRSS47A8MTI9 375 aa8.79□□□□□ -1
USP53-201ENST00000274030 FXYD2P54710 66 aa8.79□□□□□ -1
USP53-201ENST00000274030 LINC01545Q5VT33 79 aa8.79□□□□□ -1
USP53-201ENST00000274030 IGHG2P01859 326 aa8.78□□□□□ -1
USP53-201ENST00000274030 CEMP1Q6PRD7 247 aaPredicted RBP8.78□□□□□ -1
USP53-201ENST00000274030 RNF152Q8N8N0 203 aa8.78□□□□□ -1
USP53-201ENST00000274030 BAALCQ8WXS3 180 aa8.78□□□□□ -1
USP53-201ENST00000274030 VSIG2Q96IQ7 327 aa8.78□□□□□ -1
USP53-201ENST00000274030 FANCD2OSQ96PS1 177 aa8.78□□□□□ -1
USP53-201ENST00000274030 SIRPDQ9H106 197 aa8.78□□□□□ -1
USP53-201ENST00000274030 TEX48A0A1B0GUV7 120 aa8.78□□□□□ -1
USP53-201ENST00000274030 KIR2DL5BA0A0G2JN68 375 aa8.78□□□□□ -1
USP53-201ENST00000274030 KIR2DL5BA0A0G2JPC4 375 aa8.78□□□□□ -1
USP53-201ENST00000274030 KIR2DL5AQ8N109 375 aa8.78□□□□□ -1
USP53-201ENST00000274030 DAZAP2Q15038 168 aaPredicted RBP8.77□□□□□ -1
USP53-201ENST00000274030 NUP210Q8TEM1 1887 aaPredicted RBP8.77□□□□□ -1.01
USP53-201ENST00000274030 IGKV3D-7A0A0C4DH55 119 aa8.77□□□□□ -1.01
USP53-201ENST00000274030 GPHB5Q86YW7 130 aa8.77□□□□□ -1.01
USP53-201ENST00000274030 COA6Q5JTJ3 125 aaKnown RBP8.77□□□□□ -1.01
USP53-201ENST00000274030 PIEZO2Q9H5I5 2752 aa8.76□□□□□ -1.01
USP53-201ENST00000274030 K7EMT4 169 aa8.76□□□□□ -1.01
USP53-201ENST00000274030 RBM3P98179 157 aaKnown RBP8.76□□□□□ -1.01
USP53-201ENST00000274030 C11orf86A6NJI1 115 aa8.76□□□□□ -1.01
USP53-201ENST00000274030 P0DMU3 169 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms