RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 UBTD1Q9HAC8 227 aa9.79□□□□□ -0.84
HERC6-202ENST00000273960 ZNF580Q9UK33 172 aa9.79□□□□□ -0.84
HERC6-202ENST00000273960 SETD2Q9BYW2 2564 aaPredicted RBP9.78□□□□□ -0.84
HERC6-202ENST00000273960 NBR2O15453 112 aa9.78□□□□□ -0.84
HERC6-202ENST00000273960 PRR9Q5T870 116 aa9.78□□□□□ -0.84
HERC6-202ENST00000273960 CLEC19AQ6UXS0 136 aa9.78□□□□□ -0.84
HERC6-202ENST00000273960 IGHV7-4-1A0A0J9YVY3 117 aa9.77□□□□□ -0.84
HERC6-202ENST00000273960 GNRH2O43555 120 aa9.77□□□□□ -0.84
HERC6-202ENST00000273960 ORMDL2Q53FV1 153 aa9.77□□□□□ -0.84
HERC6-202ENST00000273960 TIMD4Q96H15 378 aa9.77□□□□□ -0.84
HERC6-202ENST00000273960 TRAV12-3A0A0B4J271 114 aa9.77□□□□□ -0.85
HERC6-202ENST00000273960 CTSGP08311 255 aa9.77□□□□□ -0.85
HERC6-202ENST00000273960 LINC00311Q8N616 119 aa9.77□□□□□ -0.85
HERC6-202ENST00000273960 CELSR1Q9NYQ6 3014 aa9.77□□□□□ -0.85
HERC6-202ENST00000273960 F6UB75 175 aa9.77□□□□□ -0.85
HERC6-202ENST00000273960 LINC01559Q495D7 138 aa9.77□□□□□ -0.85
HERC6-202ENST00000273960 MUSTN1Q8IVN3 82 aa9.77□□□□□ -0.85
HERC6-202ENST00000273960 RAB1BQ9H0U4 201 aa9.77□□□□□ -0.85
HERC6-202ENST00000273960 MSRB2Q9Y3D2 182 aa9.77□□□□□ -0.85
HERC6-202ENST00000273960 USP9XQ93008 2570 aaPredicted RBP9.76□□□□□ -0.85
HERC6-202ENST00000273960 F8W735 103 aaPredicted RBP9.76□□□□□ -0.85
HERC6-202ENST00000273960 RS1O15537 224 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 C2orf82Q6UX34 121 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 IGHV3-30P01768 117 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 IGHV3-30-5P0DP03 117 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 RNASE4P34096 147 aaKnown RBP9.76□□□□□ -0.85
HERC6-202ENST00000273960 CLEC2BQ92478 149 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 TOMM6Q96B49 74 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 IGLV1-47P01700 117 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 KLRB1Q12918 225 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 TMEM95Q3KNT9 176 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 NUP37Q8NFH4 326 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 C16orf92Q96LL3 132 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 FAM110AQ9BQ89 295 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 VCX2Q9H322 139 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 ABCA12Q86UK0 2595 aa9.76□□□□□ -0.85
HERC6-202ENST00000273960 A0A0U1RRA0 63 aa9.75□□□□□ -0.85
HERC6-202ENST00000273960 LOC107984640A0A0U1RRK4 108 aa9.75□□□□□ -0.85
HERC6-202ENST00000273960 SRD5A1P18405 259 aa9.75□□□□□ -0.85
HERC6-202ENST00000273960 C15orf32Q32M92 178 aa9.75□□□□□ -0.85
HERC6-202ENST00000273960 M0QXV9 152 aa9.75□□□□□ -0.85
HERC6-202ENST00000273960 RNASE13Q5GAN3 156 aaKnown RBP9.75□□□□□ -0.85
HERC6-202ENST00000273960 RBAKDNA6NC62 111 aa9.75□□□□□ -0.85
HERC6-202ENST00000273960 B9A039 149 aa9.75□□□□□ -0.85
HERC6-202ENST00000273960 ZNF672Q499Z4 452 aaPredicted RBP9.75□□□□□ -0.85
HERC6-202ENST00000273960 ODF3Q96PU9 254 aa9.75□□□□□ -0.85
HERC6-202ENST00000273960 KLK5Q9Y337 293 aaPredicted RBP9.75□□□□□ -0.85
HERC6-202ENST00000273960 TRAV12-1A0A0B4J245 112 aa9.74□□□□□ -0.85
HERC6-202ENST00000273960 J3QQQ9 107 aa9.74□□□□□ -0.85
HERC6-202ENST00000273960 LINC01620Q4KN68 170 aa9.74□□□□□ -0.85
HERC6-202ENST00000273960 IGHV3OR16-10A0A075B7F0 116 aa9.74□□□□□ -0.85
HERC6-202ENST00000273960 CRYGDP07320 174 aa9.74□□□□□ -0.85
HERC6-202ENST00000273960 COX6B1P14854 86 aa9.74□□□□□ -0.85
HERC6-202ENST00000273960 CNFNQ9BYD5 112 aa9.74□□□□□ -0.85
HERC6-202ENST00000273960 SONP18583 2426 aaKnown RBP9.74□□□□□ -0.85
HERC6-202ENST00000273960 EIF4EBP3O60516 100 aaPredicted RBP9.73□□□□□ -0.85
HERC6-202ENST00000273960 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.73□□□□□ -0.85
HERC6-202ENST00000273960 H3BMM0 161 aa9.73□□□□□ -0.85
HERC6-202ENST00000273960 ZNF22P17026 224 aaPredicted RBP9.73□□□□□ -0.85
HERC6-202ENST00000273960 ATP5J2P56134 94 aa9.73□□□□□ -0.85
HERC6-202ENST00000273960 ZNRF2Q8NHG8 242 aa9.73□□□□□ -0.85
HERC6-202ENST00000273960 EEF1AKMT3Q96AZ1 226 aa9.73□□□□□ -0.85
HERC6-202ENST00000273960 UBE2WQ96B02 151 aa9.73□□□□□ -0.85
HERC6-202ENST00000273960 LINC00477Q96M19 166 aa9.73□□□□□ -0.85
HERC6-202ENST00000273960 TRAV8-3A0A0A6YYJ7 113 aa9.73□□□□□ -0.85
HERC6-202ENST00000273960 IGLV11-55A0A075B6I3 123 aa9.72□□□□□ -0.85
HERC6-202ENST00000273960 G3V318 75 aa9.72□□□□□ -0.85
HERC6-202ENST00000273960 IGKV3-20P01619 116 aa9.72□□□□□ -0.85
HERC6-202ENST00000273960 IGHV3-33P01772 117 aa9.72□□□□□ -0.85
HERC6-202ENST00000273960 SPXQ9BT56 116 aa9.72□□□□□ -0.85
HERC6-202ENST00000273960 ZNF462Q96JM2 2506 aa9.72□□□□□ -0.85
HERC6-202ENST00000273960 LINC01546A6NGU7 62 aa9.72□□□□□ -0.85
HERC6-202ENST00000273960 TSHBP01222 138 aa9.72□□□□□ -0.85
HERC6-202ENST00000273960 DAND5Q8N907 189 aa9.72□□□□□ -0.85
HERC6-202ENST00000273960 IGLV4-69A0A075B6H9 119 aa9.71□□□□□ -0.85
HERC6-202ENST00000273960 FAM236AA0A1B0GUQ0 79 aa9.71□□□□□ -0.85
HERC6-202ENST00000273960 FAM236BA0A1B0GV22 79 aa9.71□□□□□ -0.85
HERC6-202ENST00000273960 A8MZ25 164 aa9.71□□□□□ -0.85
HERC6-202ENST00000273960 SLC50A1Q9BRV3 221 aa9.71□□□□□ -0.85
HERC6-202ENST00000273960 YAE1D1Q9NRH1 226 aa9.71□□□□□ -0.85
HERC6-202ENST00000273960 UCNP55089 124 aa9.71□□□□□ -0.86
HERC6-202ENST00000273960 CEMP1Q6PRD7 247 aaPredicted RBP9.71□□□□□ -0.86
HERC6-202ENST00000273960 SLC25A29Q8N8R3 303 aa9.71□□□□□ -0.86
HERC6-202ENST00000273960 MYO9AB2RTY4 2548 aa9.71□□□□□ -0.86
HERC6-202ENST00000273960 OOSP1A8MZH6 123 aa9.7□□□□□ -0.86
HERC6-202ENST00000273960 TRIAP1O43715 76 aa9.7□□□□□ -0.86
HERC6-202ENST00000273960 ATXN8Q156A1 80 aa9.7□□□□□ -0.86
HERC6-202ENST00000273960 DPH3P1Q9H4G8 78 aa9.7□□□□□ -0.86
HERC6-202ENST00000273960 PRRC2AP48634 2157 aaKnown RBP9.7□□□□□ -0.86
HERC6-202ENST00000273960 DPM3Q9P2X0 92 aa9.7□□□□□ -0.86
HERC6-202ENST00000273960 VPREB3Q9UKI3 123 aa9.7□□□□□ -0.86
HERC6-202ENST00000273960 FLNCQ14315 2725 aa9.7□□□□□ -0.86
HERC6-202ENST00000273960 TRGV11A0A075B6L2 103 aa9.69□□□□□ -0.86
HERC6-202ENST00000273960 BUB3O43684 328 aa9.69□□□□□ -0.86
HERC6-202ENST00000273960 LINC00694P0DN24 101 aa9.69□□□□□ -0.86
HERC6-202ENST00000273960 ASIPP42127 132 aa9.69□□□□□ -0.86
HERC6-202ENST00000273960 PMVKQ15126 192 aa9.69□□□□□ -0.86
HERC6-202ENST00000273960 DUX5Q96PT3 197 aa9.69□□□□□ -0.86
HERC6-202ENST00000273960 NAV2Q8IVL1 2488 aa9.69□□□□□ -0.86
HERC6-202ENST00000273960 HTN1P15515 57 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms