RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 A6NJY4 79 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 OR11H12B2RN74 326 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 H3BUT2 72 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 H3BUX3 64 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 DUSP14O95147 198 aaKnown RBP7.6□□□□□ -1.19
CPNE9-201ENST00000273027 IGHV4-31P0DP07 118 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 HERVK_113P61574 105 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 ANXA2RQ3ZCQ2 193 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 TM4SF20Q53R12 229 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 Q6ZVH6 145 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 PCP2Q8IVA1 136 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 SYT8Q8NBV8 401 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 NEXN-AS1Q8NBZ9 246 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 OR11H1Q8NG94 326 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 OR11H2Q8NH07 326 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 RASL10AQ92737 203 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 C20orf173Q96LM9 149 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 CYSLTR1Q9Y271 337 aa7.6□□□□□ -1.19
CPNE9-201ENST00000273027 CHTOPQ9Y3Y2 248 aaKnown RBP7.6□□□□□ -1.19
CPNE9-201ENST00000273027 IGHV3OR16-13A0A075B7E8 117 aa7.59□□□□□ -1.19
CPNE9-201ENST00000273027 IGHV3-74A0A0B4J1X5 117 aa7.59□□□□□ -1.19
CPNE9-201ENST00000273027 IGHV4-61A0A0C4DH41 118 aa7.59□□□□□ -1.19
CPNE9-201ENST00000273027 E9PLD3 99 aa7.59□□□□□ -1.19
CPNE9-201ENST00000273027 LGALS9O00182 355 aa7.59□□□□□ -1.19
CPNE9-201ENST00000273027 VCYO14598 125 aa7.59□□□□□ -1.19
CPNE9-201ENST00000273027 FXYD7P58549 80 aa7.59□□□□□ -1.19
CPNE9-201ENST00000273027 SAMD5Q5TGI4 173 aa7.59□□□□□ -1.19
CPNE9-201ENST00000273027 UNQ9165/PRO28630Q6UXU0 137 aa7.59□□□□□ -1.19
CPNE9-201ENST00000273027 TIMM17AQ99595 171 aa7.59□□□□□ -1.19
CPNE9-201ENST00000273027 KIR2DL4Q99706 377 aa7.59□□□□□ -1.19
CPNE9-201ENST00000273027 MRPL35Q9NZE8 188 aaKnown RBP7.59□□□□□ -1.19
CPNE9-201ENST00000273027 IGHV3-49A0A0A0MS15 119 aa7.58□□□□□ -1.2
CPNE9-201ENST00000273027 RNASE3P12724 160 aaKnown RBP7.58□□□□□ -1.2
CPNE9-201ENST00000273027 GATA1P15976 413 aaPredicted RBP7.58□□□□□ -1.2
CPNE9-201ENST00000273027 GCSHP23434 173 aa7.58□□□□□ -1.2
CPNE9-201ENST00000273027 PCP4P48539 62 aa7.58□□□□□ -1.2
CPNE9-201ENST00000273027 SNRPD3P62318 126 aaKnown RBP7.58□□□□□ -1.2
CPNE9-201ENST00000273027 RPL11P62913 178 aaKnown RBP7.58□□□□□ -1.2
CPNE9-201ENST00000273027 PRR9Q5T870 116 aa7.58□□□□□ -1.2
CPNE9-201ENST00000273027 C2orf66Q6UXQ4 117 aa7.58□□□□□ -1.2
CPNE9-201ENST00000273027 GTSCR1Q86UQ5 136 aa7.58□□□□□ -1.2
CPNE9-201ENST00000273027 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.58□□□□□ -1.2
CPNE9-201ENST00000273027 SPCS1Q9Y6A9 102 aa7.58□□□□□ -1.2
CPNE9-201ENST00000273027 TRAV2A0A0B4J234 112 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 MYMXA0A1B0GTQ4 84 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 A0A1B0GWB2 263 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 F8W1H4 67 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 J3QR89 54 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 GAS8-AS1O95177 125 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 ELANEP08246 267 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 PSMB8P28062 276 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 RNASE4P34096 147 aaKnown RBP7.57□□□□□ -1.2
CPNE9-201ENST00000273027 POLR2KP53803 58 aaKnown RBP7.57□□□□□ -1.2
CPNE9-201ENST00000273027 RHOHQ15669 191 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 PIK3CD-AS1Q5SR53 167 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 LYRM7Q5U5X0 104 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 BRD3OSQ6XYD6 125 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 NEGR1Q7Z3B1 354 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 C3orf56Q8N813 242 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 LINC01356Q8N9X3 169 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 DCANP1Q8TF63 244 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 EDA2RQ9HAV5 297 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 TP73-AS1Q9UF72 201 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 KIF25-AS1Q9Y6Z4 181 aa7.57□□□□□ -1.2
CPNE9-201ENST00000273027 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
CPNE9-201ENST00000273027 IGHV4-38-2P0DP08 117 aa7.56□□□□□ -1.2
CPNE9-201ENST00000273027 CRYBA4P53673 196 aa7.56□□□□□ -1.2
CPNE9-201ENST00000273027 WFDC3Q8IUB2 231 aa7.56□□□□□ -1.2
CPNE9-201ENST00000273027 C14orf178Q8N769 122 aaPredicted RBP7.56□□□□□ -1.2
CPNE9-201ENST00000273027 HIST1H4GQ99525 98 aa7.56□□□□□ -1.2
CPNE9-201ENST00000273027 VPS25Q9BRG1 176 aa7.56□□□□□ -1.2
CPNE9-201ENST00000273027 SVEP1Q4LDE5 3571 aa7.56□□□□□ -1.2
CPNE9-201ENST00000273027 TRGV11A0A075B6L2 103 aa7.55□□□□□ -1.2
CPNE9-201ENST00000273027 TRBV27A0A0K0K1C4 114 aa7.55□□□□□ -1.2
CPNE9-201ENST00000273027 TGFAP01135 160 aa7.55□□□□□ -1.2
CPNE9-201ENST00000273027 MGPP08493 103 aa7.55□□□□□ -1.2
CPNE9-201ENST00000273027 PRB4P10163 310 aaPredicted RBP7.55□□□□□ -1.2
CPNE9-201ENST00000273027 PMVKQ15126 192 aa7.55□□□□□ -1.2
CPNE9-201ENST00000273027 LY6EQ16553 131 aa7.55□□□□□ -1.2
CPNE9-201ENST00000273027 PHLDA1Q8WV24 401 aaPredicted RBP7.55□□□□□ -1.2
CPNE9-201ENST00000273027 BAALCQ8WXS3 180 aa7.55□□□□□ -1.2
CPNE9-201ENST00000273027 C9orf85Q96MD7 179 aa7.55□□□□□ -1.2
CPNE9-201ENST00000273027 CSTL1Q9H114 145 aa7.55□□□□□ -1.2
CPNE9-201ENST00000273027 LINC00527Q9UJ94 153 aa7.55□□□□□ -1.2
CPNE9-201ENST00000273027 NBEAL2Q6ZNJ1 2754 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 TRAV26-2A0A0B4J265 109 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 A0A0J9YX75 114 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 C11orf86A6NJI1 115 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 G3V4G9 280 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 K7EQG2 157 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 TRBV12-3P01733 135 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 FXYD2P54710 66 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 SCGB2A2Q13296 93 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 COTL1Q14019 142 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 FOXI2Q6ZQN5 318 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 TRPT1Q86TN4 253 aaKnown RBP7.54□□□□□ -1.2
CPNE9-201ENST00000273027 TEX29Q8N6K0 151 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 PTH2Q96A98 100 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 JMJD8Q96S16 334 aa7.54□□□□□ -1.2
CPNE9-201ENST00000273027 KLK15Q9H2R5 256 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms