RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 Q9UF83 564 aa6.51□□□□□ -1.37
VPS41-201ENST00000265745 ZFP30Q9Y2G7 519 aa6.51□□□□□ -1.37
VPS41-201ENST00000265745 FAT1Q14517 4588 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 MAP1LC3B2A6NCE7 125 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 EPM2AB3EWF7 344 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 B4DEV8 164 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 KRBOX1C9JBD0 128 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 ARPC5O15511 151 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 PSCAO43653 123 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 TRIAP1O43715 76 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 IGHV3-30P01768 117 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 IGHV3-33P01772 117 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 LINC00694P0DN24 101 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 IGHV3-30-3P0DP02 117 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 IGHV3-30-5P0DP03 117 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 DNLZQ5SXM8 178 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 SYT8Q8NBV8 401 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 ZC2HC1AQ96GY0 325 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 MAP1LC3BQ9GZQ8 125 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 JPT2Q9H910 190 aa6.5□□□□□ -1.37
VPS41-201ENST00000265745 GAGE12JA6NER3 117 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 M0R036 132 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 ARMS2P0C7Q2 107 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 FHITP49789 147 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 GAGE1Q13065 139 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 GAGE4Q13068 117 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 GAGE5Q13069 117 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 ZNF674Q2M3X9 581 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 RGS21Q2M5E4 152 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 FAM162BQ5T6X4 162 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 DGAT2L7PQ6IED9 249 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 TCEAL7Q9BRU2 100 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 Q9HAA7 133 aa6.49□□□□□ -1.37
VPS41-201ENST00000265745 TRBV6-1A0A0K0K1D8 114 aa6.48□□□□□ -1.37
VPS41-201ENST00000265745 GRIFINA4D1Z8 144 aa6.48□□□□□ -1.37
VPS41-201ENST00000265745 H3BVH4 76 aa6.48□□□□□ -1.37
VPS41-201ENST00000265745 SH2D1AO60880 128 aa6.48□□□□□ -1.37
VPS41-201ENST00000265745 LTAP01374 205 aa6.48□□□□□ -1.37
VPS41-201ENST00000265745 LAGE3Q14657 143 aa6.48□□□□□ -1.37
VPS41-201ENST00000265745 CST9LP1Q5W188 147 aa6.48□□□□□ -1.37
VPS41-201ENST00000265745 Q8N3U1 123 aa6.48□□□□□ -1.37
VPS41-201ENST00000265745 C14orf178Q8N769 122 aaPredicted RBP6.48□□□□□ -1.37
VPS41-201ENST00000265745 STOML3Q8TAV4 291 aa6.48□□□□□ -1.37
VPS41-201ENST00000265745 NTN5Q8WTR8 489 aaPredicted RBP6.48□□□□□ -1.37
VPS41-201ENST00000265745 FMC1Q96HJ9 113 aa6.48□□□□□ -1.37
VPS41-201ENST00000265745 A0A087WWC5 75 aa6.47□□□□□ -1.37
VPS41-201ENST00000265745 IGLV5-52A0A0A0MRZ9 124 aa6.47□□□□□ -1.37
VPS41-201ENST00000265745 SMLR1H3BR10 107 aa6.47□□□□□ -1.37
VPS41-201ENST00000265745 RHODO00212 210 aa6.47□□□□□ -1.37
VPS41-201ENST00000265745 UBE2G1P62253 170 aa6.47□□□□□ -1.37
VPS41-201ENST00000265745 KCNRGQ8N5I3 272 aa6.47□□□□□ -1.37
VPS41-201ENST00000265745 Q8N814 137 aa6.47□□□□□ -1.37
VPS41-201ENST00000265745 OR11H4Q8NGC9 324 aa6.47□□□□□ -1.37
VPS41-201ENST00000265745 MBD3L1Q8WWY6 194 aa6.47□□□□□ -1.37
VPS41-201ENST00000265745 PAGE4O60829 102 aa6.46□□□□□ -1.38
VPS41-201ENST00000265745 SEC11BP0C7V7 166 aa6.46□□□□□ -1.38
VPS41-201ENST00000265745 ZNF345Q14585 488 aa6.46□□□□□ -1.38
VPS41-201ENST00000265745 DAZ4Q86SG3 579 aaKnown RBP6.46□□□□□ -1.38
VPS41-201ENST00000265745 SFRP2Q96HF1 295 aa6.46□□□□□ -1.38
VPS41-201ENST00000265745 TM2D2Q9BX73 214 aa6.46□□□□□ -1.38
VPS41-201ENST00000265745 DAZ3Q9NR90 486 aaKnown RBP6.46□□□□□ -1.38
VPS41-201ENST00000265745 PHLDA3Q9Y5J5 127 aa6.46□□□□□ -1.38
VPS41-201ENST00000265745 TMSB15BA0A087X1C1 80 aa6.45□□□□□ -1.38
VPS41-201ENST00000265745 TRAV8-3A0A0A6YYJ7 113 aa6.45□□□□□ -1.38
VPS41-201ENST00000265745 HMSDA8MTL9 139 aa6.45□□□□□ -1.38
VPS41-201ENST00000265745 UMAD1C9J7I0 102 aa6.45□□□□□ -1.38
VPS41-201ENST00000265745 M0R381 172 aa6.45□□□□□ -1.38
VPS41-201ENST00000265745 SMR3BP02814 79 aaPredicted RBP6.45□□□□□ -1.38
VPS41-201ENST00000265745 TPT1P13693 172 aaKnown RBP6.45□□□□□ -1.38
VPS41-201ENST00000265745 AKR1C3P42330 323 aa6.45□□□□□ -1.38
VPS41-201ENST00000265745 FAM74A4Q5TZK3 123 aa6.45□□□□□ -1.38
VPS41-201ENST00000265745 Q5VSD8 79 aa6.45□□□□□ -1.38
VPS41-201ENST00000265745 SFT2D1Q8WV19 159 aa6.45□□□□□ -1.38
VPS41-201ENST00000265745 FRZBQ92765 325 aa6.45□□□□□ -1.38
VPS41-201ENST00000265745 TMEM70Q9BUB7 260 aa6.45□□□□□ -1.38
VPS41-201ENST00000265745 S100A9P06702 114 aaKnown RBP6.44□□□□□ -1.38
VPS41-201ENST00000265745 INAFM2P0DMQ5 153 aa6.44□□□□□ -1.38
VPS41-201ENST00000265745 WFDC2Q14508 124 aa6.44□□□□□ -1.38
VPS41-201ENST00000265745 NIT1Q86X76 327 aa6.44□□□□□ -1.38
VPS41-201ENST00000265745 ZFP82Q8N141 532 aa6.44□□□□□ -1.38
VPS41-201ENST00000265745 FAM213BQ8TBF2 198 aa6.44□□□□□ -1.38
VPS41-201ENST00000265745 MLST8Q9BVC4 326 aa6.44□□□□□ -1.38
VPS41-201ENST00000265745 A0A0D9SG52 128 aa6.43□□□□□ -1.38
VPS41-201ENST00000265745 TRBV10-1A0A0K0K1A3 114 aa6.43□□□□□ -1.38
VPS41-201ENST00000265745 HAMPP81172 84 aa6.43□□□□□ -1.38
VPS41-201ENST00000265745 BAGE2Q86Y30 109 aa6.43□□□□□ -1.38
VPS41-201ENST00000265745 ZNF471Q9BX82 626 aaPredicted RBP6.43□□□□□ -1.38
VPS41-201ENST00000265745 TRBV7-3A0A075B6L6 115 aa6.42□□□□□ -1.38
VPS41-201ENST00000265745 A0A1B0GV50 99 aa6.42□□□□□ -1.38
VPS41-201ENST00000265745 LECT2O14960 151 aa6.42□□□□□ -1.38
VPS41-201ENST00000265745 BCL2L11O43521 198 aa6.42□□□□□ -1.38
VPS41-201ENST00000265745 C1QBP02746 253 aa6.42□□□□□ -1.38
VPS41-201ENST00000265745 UBE2D3P61077 147 aa6.42□□□□□ -1.38
VPS41-201ENST00000265745 UBE2D2P62837 147 aa6.42□□□□□ -1.38
VPS41-201ENST00000265745 RPL36AP83881 106 aaKnown RBP6.42□□□□□ -1.38
VPS41-201ENST00000265745 RPL19P84098 196 aaKnown RBP6.42□□□□□ -1.38
VPS41-201ENST00000265745 TMUB2Q71RG4 321 aa6.42□□□□□ -1.38
VPS41-201ENST00000265745 OR10G8Q8NGN5 311 aa6.42□□□□□ -1.38
VPS41-201ENST00000265745 RPL36ALQ969Q0 106 aaKnown RBP6.42□□□□□ -1.38
VPS41-201ENST00000265745 COX11Q9Y6N1 276 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms