RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 AMTNQ6UX39 209 aa12.51□□□□□ -0.41
CHKA-201ENST00000265689 DEFB125Q8N687 156 aa12.51□□□□□ -0.41
CHKA-201ENST00000265689 ORAOV1Q8WV07 137 aa12.51□□□□□ -0.41
CHKA-201ENST00000265689 RPL39LQ96EH5 51 aaKnown RBP12.51□□□□□ -0.41
CHKA-201ENST00000265689 COX11Q9Y6N1 276 aa12.51□□□□□ -0.41
CHKA-201ENST00000265689 A0A1W2PRX2 142 aa12.5□□□□□ -0.41
CHKA-201ENST00000265689 LGALS9BQ3B8N2 356 aa12.5□□□□□ -0.41
CHKA-201ENST00000265689 LGALS9CQ6DKI2 356 aa12.5□□□□□ -0.41
CHKA-201ENST00000265689 MDFICQ9P1T7 246 aa12.5□□□□□ -0.41
CHKA-201ENST00000265689 MPV17L2Q567V2 206 aa12.5□□□□□ -0.41
CHKA-201ENST00000265689 IGHV3-16A0A0C4DH30 117 aa12.49□□□□□ -0.41
CHKA-201ENST00000265689 CD28P10747 220 aa12.49□□□□□ -0.41
CHKA-201ENST00000265689 LAGE3Q14657 143 aa12.49□□□□□ -0.41
CHKA-201ENST00000265689 Q8N1Y9 231 aa12.49□□□□□ -0.41
CHKA-201ENST00000265689 SMIM2Q9BVW6 85 aa12.49□□□□□ -0.41
CHKA-201ENST00000265689 KIF25-AS1Q9Y6Z4 181 aa12.49□□□□□ -0.41
CHKA-201ENST00000265689 DYNLRB2Q8TF09 96 aa12.48□□□□□ -0.41
CHKA-201ENST00000265689 RAX2Q96IS3 184 aa12.48□□□□□ -0.41
CHKA-201ENST00000265689 LINC00315P59091 139 aa12.48□□□□□ -0.41
CHKA-201ENST00000265689 DKK2Q9UBU2 259 aa12.48□□□□□ -0.41
CHKA-201ENST00000265689 IGHV1OR15-1A0A075B7D0 117 aa12.47□□□□□ -0.41
CHKA-201ENST00000265689 SMIM17P0DL12 118 aa12.47□□□□□ -0.41
CHKA-201ENST00000265689 SUMO2P61956 95 aaKnown RBP12.47□□□□□ -0.41
CHKA-201ENST00000265689 MAST4O15021 2626 aa12.47□□□□□ -0.41
CHKA-201ENST00000265689 A0A087WWL8 130 aa12.47□□□□□ -0.41
CHKA-201ENST00000265689 DEFB114Q30KQ6 69 aa12.47□□□□□ -0.41
CHKA-201ENST00000265689 C9orf85Q96MD7 179 aa12.47□□□□□ -0.41
CHKA-201ENST00000265689 C21orf62-AS1Q17RA5 79 aa12.46□□□□□ -0.41
CHKA-201ENST00000265689 NUDT3O95989 172 aa12.46□□□□□ -0.42
CHKA-201ENST00000265689 RBMY1A1P0DJD3 496 aaKnown RBP12.46□□□□□ -0.42
CHKA-201ENST00000265689 RBMY1CP0DJD4 496 aa12.46□□□□□ -0.42
CHKA-201ENST00000265689 TCTAP57738 103 aa12.46□□□□□ -0.42
CHKA-201ENST00000265689 UBE2V1Q13404 147 aa12.46□□□□□ -0.42
CHKA-201ENST00000265689 RBMY1FQ15415 496 aaKnown RBP12.46□□□□□ -0.42
CHKA-201ENST00000265689 CD300EQ496F6 205 aaPredicted RBP12.46□□□□□ -0.42
CHKA-201ENST00000265689 SLC25A34Q6PIV7 304 aa12.46□□□□□ -0.42
CHKA-201ENST00000265689 RBMY1BA6NDE4 496 aaKnown RBP12.45□□□□□ -0.42
CHKA-201ENST00000265689 RBMY1EA6NEQ0 496 aaKnown RBP12.45□□□□□ -0.42
CHKA-201ENST00000265689 H3BMM0 161 aa12.45□□□□□ -0.42
CHKA-201ENST00000265689 PRSS1P07477 247 aa12.45□□□□□ -0.42
CHKA-201ENST00000265689 RBMY1DP0C7P1 496 aaKnown RBP12.45□□□□□ -0.42
CHKA-201ENST00000265689 ANKRD39Q53RE8 183 aa12.45□□□□□ -0.42
CHKA-201ENST00000265689 POM121L12Q8N7R1 296 aa12.45□□□□□ -0.42
CHKA-201ENST00000265689 RNASE8Q8TDE3 154 aaKnown RBP12.45□□□□□ -0.42
CHKA-201ENST00000265689 C20orf78Q9BR46 151 aa12.45□□□□□ -0.42
CHKA-201ENST00000265689 NOTCH3Q9UM47 2321 aa12.45□□□□□ -0.42
CHKA-201ENST00000265689 FBN1P35555 2871 aaKnown RBP12.45□□□□□ -0.42
CHKA-201ENST00000265689 HLA-DRB4P13762 266 aa12.45□□□□□ -0.42
CHKA-201ENST00000265689 LINC01006Q8NI28 216 aa12.45□□□□□ -0.42
CHKA-201ENST00000265689 CITED2Q99967 270 aaPredicted RBP12.45□□□□□ -0.42
CHKA-201ENST00000265689 HLA-DRB4X5D2U9 266 aa12.45□□□□□ -0.42
CHKA-201ENST00000265689 TRAV2A0A0B4J234 112 aa12.44□□□□□ -0.42
CHKA-201ENST00000265689 RNASE1P07998 156 aaKnown RBP12.44□□□□□ -0.42
CHKA-201ENST00000265689 MAP6D1Q9H9H5 199 aa12.44□□□□□ -0.42
CHKA-201ENST00000265689 CCL24O00175 119 aa12.43□□□□□ -0.42
CHKA-201ENST00000265689 ODF1Q14990 250 aa12.43□□□□□ -0.42
CHKA-201ENST00000265689 HTN1P15515 57 aa12.43□□□□□ -0.42
CHKA-201ENST00000265689 SUMO4Q6EEV6 95 aa12.43□□□□□ -0.42
CHKA-201ENST00000265689 CBY1Q9Y3M2 126 aa12.43□□□□□ -0.42
CHKA-201ENST00000265689 F5H697 171 aa12.42□□□□□ -0.42
CHKA-201ENST00000265689 FHL3Q13643 280 aa12.42□□□□□ -0.42
CHKA-201ENST00000265689 BVES-AS1Q5T3Y7 98 aa12.42□□□□□ -0.42
CHKA-201ENST00000265689 FAM74A4Q5TZK3 123 aa12.42□□□□□ -0.42
CHKA-201ENST00000265689 NEGR1Q7Z3B1 354 aa12.42□□□□□ -0.42
CHKA-201ENST00000265689 CSTL1Q9H114 145 aa12.42□□□□□ -0.42
CHKA-201ENST00000265689 A8MTW9 85 aa12.42□□□□□ -0.42
CHKA-201ENST00000265689 COX8AP10176 69 aa12.42□□□□□ -0.42
CHKA-201ENST00000265689 CBY3A6NI87 242 aa12.41□□□□□ -0.42
CHKA-201ENST00000265689 ATP5LO75964 103 aa12.41□□□□□ -0.42
CHKA-201ENST00000265689 PRM2P04554 102 aa12.41□□□□□ -0.42
CHKA-201ENST00000265689 VAMP3Q15836 100 aa12.41□□□□□ -0.42
CHKA-201ENST00000265689 ZNF256Q9Y2P7 627 aaPredicted RBP12.41□□□□□ -0.42
CHKA-201ENST00000265689 TAX1BP3O14907 124 aa12.41□□□□□ -0.42
CHKA-201ENST00000265689 SYT8Q8NBV8 401 aa12.41□□□□□ -0.42
CHKA-201ENST00000265689 DEFB104AQ8WTQ1 72 aa12.41□□□□□ -0.42
CHKA-201ENST00000265689 C16orf95Q9H693 158 aa12.41□□□□□ -0.42
CHKA-201ENST00000265689 ORMDL2Q53FV1 153 aa12.4□□□□□ -0.42
CHKA-201ENST00000265689 PPP1R17O96001 155 aa12.4□□□□□ -0.42
CHKA-201ENST00000265689 ZMAT4Q9H898 229 aa12.4□□□□□ -0.42
CHKA-201ENST00000265689 TRGV11A0A075B6L2 103 aa12.39□□□□□ -0.43
CHKA-201ENST00000265689 CRYGDP07320 174 aa12.39□□□□□ -0.43
CHKA-201ENST00000265689 OR4C5Q8NGB2 326 aa12.39□□□□□ -0.43
CHKA-201ENST00000265689 SPAG8Q99932 426 aaPredicted RBP12.39□□□□□ -0.43
CHKA-201ENST00000265689 TSSC4Q9Y5U2 329 aaPredicted RBP12.39□□□□□ -0.43
CHKA-201ENST00000265689 ZNF876PQ49A33 203 aa12.39□□□□□ -0.43
CHKA-201ENST00000265689 ZNF418Q8TF45 676 aaPredicted RBP12.39□□□□□ -0.43
CHKA-201ENST00000265689 FGF6P10767 208 aa12.38□□□□□ -0.43
CHKA-201ENST00000265689 HILS1P60008 231 aa12.38□□□□□ -0.43
CHKA-201ENST00000265689 TOMM6Q96B49 74 aa12.38□□□□□ -0.43
CHKA-201ENST00000265689 PCP4P48539 62 aa12.38□□□□□ -0.43
CHKA-201ENST00000265689 IGKCP01834 107 aa12.37□□□□□ -0.43
CHKA-201ENST00000265689 ZNF56Q15929 161 aa12.37□□□□□ -0.43
CHKA-201ENST00000265689 ODF3L2Q3SX64 289 aa12.37□□□□□ -0.43
CHKA-201ENST00000265689 C2orf91Q6ZV80 131 aa12.37□□□□□ -0.43
CHKA-201ENST00000265689 SCGB3A1Q96QR1 104 aa12.37□□□□□ -0.43
CHKA-201ENST00000265689 HHLA3Q9XRX5 114 aa12.37□□□□□ -0.43
CHKA-201ENST00000265689 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.37□□□□□ -0.43
CHKA-201ENST00000265689 RBX1P62877 108 aa12.37□□□□□ -0.43
CHKA-201ENST00000265689 MRPL35Q9NZE8 188 aaKnown RBP12.37□□□□□ -0.43
CHKA-201ENST00000265689 K7EMI3 77 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms