RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 FAM223AQ8IWN6 122 aa11.59□□□□□ -0.55
CASC3-201ENST00000264645 PIMREGQ9BSJ6 248 aa11.59□□□□□ -0.55
CASC3-201ENST00000264645 JPT2Q9H910 190 aa11.59□□□□□ -0.55
CASC3-201ENST00000264645 LAMA2P24043 3122 aaKnown RBP11.59□□□□□ -0.55
CASC3-201ENST00000264645 IGHV1OR15-1A0A075B7D0 117 aa11.59□□□□□ -0.55
CASC3-201ENST00000264645 LENEPQ9Y5L5 61 aa11.59□□□□□ -0.55
CASC3-201ENST00000264645 SOCS3O14543 225 aa11.59□□□□□ -0.55
CASC3-201ENST00000264645 TMEM86BQ8N661 226 aa11.59□□□□□ -0.55
CASC3-201ENST00000264645 TECTAO75443 2155 aa11.59□□□□□ -0.55
CASC3-201ENST00000264645 IGHV7-81A0A0B4J1V7 117 aa11.58□□□□□ -0.55
CASC3-201ENST00000264645 NEXN-AS1Q8NBZ9 246 aa11.58□□□□□ -0.56
CASC3-201ENST00000264645 LINC00574Q9H8X3 128 aa11.58□□□□□ -0.56
CASC3-201ENST00000264645 TRGV1A0A0A0MS02 117 aa11.58□□□□□ -0.56
CASC3-201ENST00000264645 RPL36AP83881 106 aaKnown RBP11.58□□□□□ -0.56
CASC3-201ENST00000264645 RPL36ALQ969Q0 106 aaKnown RBP11.58□□□□□ -0.56
CASC3-201ENST00000264645 USMG5Q96IX5 58 aa11.58□□□□□ -0.56
CASC3-201ENST00000264645 HOXD3P31249 432 aaPredicted RBP11.58□□□□□ -0.56
CASC3-201ENST00000264645 TRBV7-3A0A075B6L6 115 aa11.57□□□□□ -0.56
CASC3-201ENST00000264645 PFN2P35080 140 aa11.57□□□□□ -0.56
CASC3-201ENST00000264645 SEM1Q6ZVN7 128 aa11.57□□□□□ -0.56
CASC3-201ENST00000264645 Q9H8V8 135 aa11.57□□□□□ -0.56
CASC3-201ENST00000264645 IGKV3D-7A0A0C4DH55 119 aa11.57□□□□□ -0.56
CASC3-201ENST00000264645 H3BT86 120 aa11.57□□□□□ -0.56
CASC3-201ENST00000264645 SLC25A29Q8N8R3 303 aa11.57□□□□□ -0.56
CASC3-201ENST00000264645 ACYP1P07311 99 aa11.56□□□□□ -0.56
CASC3-201ENST00000264645 UBE2E1P51965 193 aa11.56□□□□□ -0.56
CASC3-201ENST00000264645 ZNF415Q09FC8 603 aa11.56□□□□□ -0.56
CASC3-201ENST00000264645 MRPL53Q96EL3 112 aaKnown RBP11.56□□□□□ -0.56
CASC3-201ENST00000264645 DSCAMO60469 2012 aa11.56□□□□□ -0.56
CASC3-201ENST00000264645 RPL32P62910 135 aaKnown RBP11.56□□□□□ -0.56
CASC3-201ENST00000264645 RHOHQ15669 191 aa11.56□□□□□ -0.56
CASC3-201ENST00000264645 TET2Q6N021 2002 aaPredicted RBP11.56□□□□□ -0.56
CASC3-201ENST00000264645 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.55□□□□□ -0.56
CASC3-201ENST00000264645 IGKV2-29A2NJV5 120 aaPredicted RBP11.55□□□□□ -0.56
CASC3-201ENST00000264645 S100A7L2Q5SY68 101 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 TIMM17AQ99595 171 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 LAMTOR3Q9UHA4 124 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 MYO18BQ8IUG5 2567 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 SPANXDQ9BXN6 97 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 LTBP2Q14767 1821 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 PTPRSQ13332 1948 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 A0A1B0GX51 115 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 J3KT08 172 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 LGALS9O00182 355 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 NDUFA4O00483 81 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 C6orf226Q5I0X4 101 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 BPESC1Q9GZL8 116 aa11.55□□□□□ -0.56
CASC3-201ENST00000264645 TNRC6BQ9UPQ9 1833 aaKnown RBP11.55□□□□□ -0.56
CASC3-201ENST00000264645 A0A1W2PNU3 283 aaPredicted RBP11.54□□□□□ -0.56
CASC3-201ENST00000264645 DEFB131AP59861 70 aa11.54□□□□□ -0.56
CASC3-201ENST00000264645 C9orf47Q6ZRZ4 202 aa11.54□□□□□ -0.56
CASC3-201ENST00000264645 PRR30Q53SZ7 412 aaPredicted RBP11.54□□□□□ -0.56
CASC3-201ENST00000264645 OVOL2Q9BRP0 275 aa11.54□□□□□ -0.56
CASC3-201ENST00000264645 UBE2E2Q96LR5 201 aa11.54□□□□□ -0.56
CASC3-201ENST00000264645 SONP18583 2426 aaKnown RBP11.54□□□□□ -0.56
CASC3-201ENST00000264645 NPBQ8NG41 125 aa11.54□□□□□ -0.56
CASC3-201ENST00000264645 TRGV4A0A0C4DH28 118 aa11.53□□□□□ -0.56
CASC3-201ENST00000264645 RHODO00212 210 aa11.53□□□□□ -0.56
CASC3-201ENST00000264645 NOTCH2Q04721 2471 aa11.53□□□□□ -0.56
CASC3-201ENST00000264645 IGHV3-33P01772 117 aa11.53□□□□□ -0.56
CASC3-201ENST00000264645 IGF1P05019 195 aa11.53□□□□□ -0.56
CASC3-201ENST00000264645 C22orf34Q6ZV56 151 aa11.52□□□□□ -0.56
CASC3-201ENST00000264645 STHQ8IWL8 128 aa11.52□□□□□ -0.56
CASC3-201ENST00000264645 SVIPQ8NHG7 77 aa11.52□□□□□ -0.56
CASC3-201ENST00000264645 ZNRF2Q8NHG8 242 aa11.52□□□□□ -0.56
CASC3-201ENST00000264645 PEMTQ9UBM1 199 aa11.52□□□□□ -0.56
CASC3-201ENST00000264645 MRPS12O15235 138 aaKnown RBP11.52□□□□□ -0.57
CASC3-201ENST00000264645 IGHV3-30-3P0DP02 117 aa11.52□□□□□ -0.57
CASC3-201ENST00000264645 SRSF2Q01130 221 aaKnown RBP11.52□□□□□ -0.57
CASC3-201ENST00000264645 DNAJC30Q96LL9 226 aa11.52□□□□□ -0.57
CASC3-201ENST00000264645 NFE4Q86UQ8 179 aa11.52□□□□□ -0.57
CASC3-201ENST00000264645 SETD2Q9BYW2 2564 aaPredicted RBP11.52□□□□□ -0.57
CASC3-201ENST00000264645 Q6ZS46 218 aa11.51□□□□□ -0.57
CASC3-201ENST00000264645 SPRY4Q9C004 299 aa11.51□□□□□ -0.57
CASC3-201ENST00000264645 A0A0B4J2C4 111 aa11.51□□□□□ -0.57
CASC3-201ENST00000264645 GATA3P23771 443 aa11.5□□□□□ -0.57
CASC3-201ENST00000264645 PIP4P2Q8N4L2 257 aa11.5□□□□□ -0.57
CASC3-201ENST00000264645 NRACQ8N912 160 aa11.5□□□□□ -0.57
CASC3-201ENST00000264645 HAMPP81172 84 aa11.5□□□□□ -0.57
CASC3-201ENST00000264645 OTOGLQ3ZCN5 2332 aa11.5□□□□□ -0.57
CASC3-201ENST00000264645 IGHV7-4-1A0A0J9YVY3 117 aa11.5□□□□□ -0.57
CASC3-201ENST00000264645 ATOX1O00244 68 aa11.5□□□□□ -0.57
CASC3-201ENST00000264645 TRIAP1O43715 76 aa11.5□□□□□ -0.57
CASC3-201ENST00000264645 CEMP1Q6PRD7 247 aaPredicted RBP11.5□□□□□ -0.57
CASC3-201ENST00000264645 Q8N9W7 124 aa11.5□□□□□ -0.57
CASC3-201ENST00000264645 C11orf21Q9P2W6 132 aa11.49□□□□□ -0.57
CASC3-201ENST00000264645 A0A0J9YXY3 114 aa11.49□□□□□ -0.57
CASC3-201ENST00000264645 C11orf44Q8N8P7 122 aa11.49□□□□□ -0.57
CASC3-201ENST00000264645 UBL5Q9BZL1 73 aa11.48□□□□□ -0.57
CASC3-201ENST00000264645 IGHV3-30P01768 117 aa11.48□□□□□ -0.57
CASC3-201ENST00000264645 IGHV3-30-5P0DP03 117 aa11.48□□□□□ -0.57
CASC3-201ENST00000264645 SMAD5-AS1Q9Y6J3 95 aa11.48□□□□□ -0.57
CASC3-201ENST00000264645 A0A1W2PRX2 142 aa11.48□□□□□ -0.57
CASC3-201ENST00000264645 LINC00643Q86TS7 51 aa11.48□□□□□ -0.57
CASC3-201ENST00000264645 XCL2Q9UBD3 114 aa11.48□□□□□ -0.57
CASC3-201ENST00000264645 TRAV13-2A0A0B4J235 113 aa11.47□□□□□ -0.57
CASC3-201ENST00000264645 NXPH4O95158 308 aa11.47□□□□□ -0.57
CASC3-201ENST00000264645 MALP21145 153 aa11.47□□□□□ -0.57
CASC3-201ENST00000264645 CCL19Q99731 98 aa11.47□□□□□ -0.57
CASC3-201ENST00000264645 LRP4O75096 1905 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms