RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 Q6ZSR3 168 aa13.94□□□□□ -0.18
ITGA6-201ENST00000264107 XCL1P47992 114 aa13.94□□□□□ -0.18
ITGA6-201ENST00000264107 NDUFS5O43920 106 aa13.94□□□□□ -0.18
ITGA6-201ENST00000264107 IGHV1-69P01742 117 aa13.94□□□□□ -0.18
ITGA6-201ENST00000264107 IGHV3-33P01772 117 aa13.94□□□□□ -0.18
ITGA6-201ENST00000264107 C5orf38Q86SI9 138 aa13.94□□□□□ -0.18
ITGA6-201ENST00000264107 ATP5EP56381 51 aaPredicted RBP13.93□□□□□ -0.18
ITGA6-201ENST00000264107 TSC2P49815 1807 aa13.93□□□□□ -0.18
ITGA6-201ENST00000264107 GTF3C1Q12789 2109 aa13.93□□□□□ -0.18
ITGA6-201ENST00000264107 ZNF295-AS1Q8N0V1 137 aa13.92□□□□□ -0.18
ITGA6-201ENST00000264107 H3BQ85 93 aa13.92□□□□□ -0.18
ITGA6-201ENST00000264107 I3L2K1 104 aa13.92□□□□□ -0.18
ITGA6-201ENST00000264107 HIST2H2BCQ6DN03 193 aa13.92□□□□□ -0.18
ITGA6-201ENST00000264107 LINC00310P59036 64 aa13.92□□□□□ -0.18
ITGA6-201ENST00000264107 CLPSL2Q6UWE3 100 aa13.92□□□□□ -0.18
ITGA6-201ENST00000264107 TEX22C9J3V5 150 aa13.92□□□□□ -0.18
ITGA6-201ENST00000264107 MLST8Q9BVC4 326 aa13.91□□□□□ -0.18
ITGA6-201ENST00000264107 CHKB-CPT1BH3BT56 60 aa13.91□□□□□ -0.18
ITGA6-201ENST00000264107 SMIM26A0A096LP01 95 aa13.91□□□□□ -0.18
ITGA6-201ENST00000264107 NEXN-AS1Q8NBZ9 246 aa13.91□□□□□ -0.18
ITGA6-201ENST00000264107 PRAC2D3DTV9 90 aa13.9□□□□□ -0.18
ITGA6-201ENST00000264107 COX6B1P14854 86 aa13.9□□□□□ -0.18
ITGA6-201ENST00000264107 HIST2H2BDQ6DRA6 164 aa13.9□□□□□ -0.18
ITGA6-201ENST00000264107 PPDPFQ9H3Y8 114 aa13.89□□□□□ -0.19
ITGA6-201ENST00000264107 MDS2Q8NDY4 140 aa13.89□□□□□ -0.19
ITGA6-201ENST00000264107 SNURFQ9Y675 71 aa13.89□□□□□ -0.19
ITGA6-201ENST00000264107 ELANEP08246 267 aa13.89□□□□□ -0.19
ITGA6-201ENST00000264107 DSCAML1Q8TD84 2053 aa13.89□□□□□ -0.19
ITGA6-201ENST00000264107 IGHV7-4-1A0A0J9YVY3 117 aa13.89□□□□□ -0.19
ITGA6-201ENST00000264107 K7EIM0 57 aa13.89□□□□□ -0.19
ITGA6-201ENST00000264107 NDUFC1O43677 76 aa13.89□□□□□ -0.19
ITGA6-201ENST00000264107 MIR7-3HGQ8N6C7 128 aa13.89□□□□□ -0.19
ITGA6-201ENST00000264107 C11orf53Q8IXP5 236 aa13.88□□□□□ -0.19
ITGA6-201ENST00000264107 LINC00526Q96FQ7 95 aa13.88□□□□□ -0.19
ITGA6-201ENST00000264107 PDE6GP18545 87 aa13.88□□□□□ -0.19
ITGA6-201ENST00000264107 RLFQ13129 1914 aa13.87□□□□□ -0.19
ITGA6-201ENST00000264107 DYSFO75923 2080 aa13.87□□□□□ -0.19
ITGA6-201ENST00000264107 IGLV3-9A0A075B6K5 115 aa13.87□□□□□ -0.19
ITGA6-201ENST00000264107 PROP1O75360 226 aa13.87□□□□□ -0.19
ITGA6-201ENST00000264107 LY6HO94772 140 aa13.87□□□□□ -0.19
ITGA6-201ENST00000264107 HIGD2BQ4VC39 106 aa13.87□□□□□ -0.19
ITGA6-201ENST00000264107 RETNQ9HD89 108 aa13.87□□□□□ -0.19
ITGA6-201ENST00000264107 MRPL36Q9P0J6 103 aaKnown RBP13.87□□□□□ -0.19
ITGA6-201ENST00000264107 LOC107984640A0A0U1RRK4 108 aa13.87□□□□□ -0.19
ITGA6-201ENST00000264107 TNRC6BQ9UPQ9 1833 aaKnown RBP13.86□□□□□ -0.19
ITGA6-201ENST00000264107 MBD3L4A6NDZ8 208 aaPredicted RBP13.86□□□□□ -0.19
ITGA6-201ENST00000264107 MBD3L3A6NE82 208 aaPredicted RBP13.86□□□□□ -0.19
ITGA6-201ENST00000264107 MBD3L5A6NJ08 208 aaPredicted RBP13.86□□□□□ -0.19
ITGA6-201ENST00000264107 ZGRF1Q86YA3 2104 aa13.86□□□□□ -0.19
ITGA6-201ENST00000264107 MBD3L2Q8NHZ7 208 aaPredicted RBP13.86□□□□□ -0.19
ITGA6-201ENST00000264107 SPRY4Q9C004 299 aa13.86□□□□□ -0.19
ITGA6-201ENST00000264107 ANGP03950 147 aaKnown RBP13.86□□□□□ -0.19
ITGA6-201ENST00000264107 NSUN5P1Q3KNT7 163 aa13.85□□□□□ -0.19
ITGA6-201ENST00000264107 C20orf203Q8NBC4 194 aa13.85□□□□□ -0.19
ITGA6-201ENST00000264107 P0C879 139 aa13.85□□□□□ -0.19
ITGA6-201ENST00000264107 NRGNQ92686 78 aa13.85□□□□□ -0.19
ITGA6-201ENST00000264107 PLXNA3P51805 1871 aa13.84□□□□□ -0.19
ITGA6-201ENST00000264107 IGHV3-30P01768 117 aa13.84□□□□□ -0.19
ITGA6-201ENST00000264107 IGHV3-30-5P0DP03 117 aa13.84□□□□□ -0.19
ITGA6-201ENST00000264107 NOTCH3Q9UM47 2321 aa13.84□□□□□ -0.19
ITGA6-201ENST00000264107 Q6ZQT7 251 aa13.84□□□□□ -0.19
ITGA6-201ENST00000264107 PIK3CD-AS1Q5SR53 167 aa13.84□□□□□ -0.19
ITGA6-201ENST00000264107 NCR3O14931 201 aa13.83□□□□□ -0.2
ITGA6-201ENST00000264107 BLCAPP62952 87 aa13.83□□□□□ -0.2
ITGA6-201ENST00000264107 PLXNA4Q9HCM2 1894 aa13.83□□□□□ -0.2
ITGA6-201ENST00000264107 MED14OSP0DP75 135 aa13.83□□□□□ -0.2
ITGA6-201ENST00000264107 KRTAP27-1Q3LI81 207 aa13.83□□□□□ -0.2
ITGA6-201ENST00000264107 MDFICQ9P1T7 246 aa13.83□□□□□ -0.2
ITGA6-201ENST00000264107 SERP1Q9Y6X1 66 aa13.82□□□□□ -0.2
ITGA6-201ENST00000264107 C9orf47Q6ZRZ4 202 aa13.82□□□□□ -0.2
ITGA6-201ENST00000264107 TRBV7-3A0A075B6L6 115 aa13.82□□□□□ -0.2
ITGA6-201ENST00000264107 RITA1Q96K30 269 aa13.82□□□□□ -0.2
ITGA6-201ENST00000264107 OBSL1O75147 1896 aa13.82□□□□□ -0.2
ITGA6-201ENST00000264107 HELZP42694 1942 aaKnown RBP13.82□□□□□ -0.2
ITGA6-201ENST00000264107 NACAE9PAV3 2078 aa13.82□□□□□ -0.2
ITGA6-201ENST00000264107 E7EQL1 145 aa13.81□□□□□ -0.2
ITGA6-201ENST00000264107 U3KQK5 164 aa13.81□□□□□ -0.2
ITGA6-201ENST00000264107 ZNF80P51504 273 aaPredicted RBP13.81□□□□□ -0.2
ITGA6-201ENST00000264107 RIF1Q5UIP0 2472 aaKnown RBP13.81□□□□□ -0.2
ITGA6-201ENST00000264107 RUSC1-AS1Q66K80 236 aa13.8□□□□□ -0.2
ITGA6-201ENST00000264107 KLK5Q9Y337 293 aaPredicted RBP13.8□□□□□ -0.2
ITGA6-201ENST00000264107 NLRC5Q86WI3 1866 aa13.8□□□□□ -0.2
ITGA6-201ENST00000264107 DOCK7Q96N67 2140 aa13.8□□□□□ -0.2
ITGA6-201ENST00000264107 LINC01619G3V211 115 aa13.8□□□□□ -0.2
ITGA6-201ENST00000264107 CTSGP08311 255 aa13.8□□□□□ -0.2
ITGA6-201ENST00000264107 SCXQ7RTU7 201 aa13.8□□□□□ -0.2
ITGA6-201ENST00000264107 A0A096LPF7 62 aa13.8□□□□□ -0.2
ITGA6-201ENST00000264107 TMEM223A0PJW6 202 aa13.79□□□□□ -0.2
ITGA6-201ENST00000264107 BPY2O14599 106 aa13.79□□□□□ -0.2
ITGA6-201ENST00000264107 PKDREJQ9NTG1 2253 aa13.79□□□□□ -0.2
ITGA6-201ENST00000264107 ZNF407Q9C0G0 2248 aa13.79□□□□□ -0.2
ITGA6-201ENST00000264107 A0A0G2JNJ9 132 aa13.79□□□□□ -0.2
ITGA6-201ENST00000264107 E7EUB6 86 aa13.79□□□□□ -0.2
ITGA6-201ENST00000264107 Q9UFV3 132 aa13.79□□□□□ -0.2
ITGA6-201ENST00000264107 LST1O00453 97 aa13.79□□□□□ -0.2
ITGA6-201ENST00000264107 H7C423 109 aa13.79□□□□□ -0.2
ITGA6-201ENST00000264107 CACNA1GO43497 2377 aa13.79□□□□□ -0.2
ITGA6-201ENST00000264107 IGKV1D-37A0A075B6S9 117 aa13.79□□□□□ -0.2
ITGA6-201ENST00000264107 VWA8A3KMH1 1905 aa13.78□□□□□ -0.2
ITGA6-201ENST00000264107 IGLV11-55A0A075B6I3 123 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms