RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 ARL17AQ8IVW1 177 aa14.47□□□□□ -0.09
SCARB1-201ENST00000261693 KLLNB2CW77 178 aa14.47□□□□□ -0.09
SCARB1-201ENST00000261693 J3QR89 54 aa14.47□□□□□ -0.09
SCARB1-201ENST00000261693 TMEM95Q3KNT9 176 aa14.47□□□□□ -0.09
SCARB1-201ENST00000261693 CSMD2Q7Z408 3487 aa14.47□□□□□ -0.09
SCARB1-201ENST00000261693 NXPH4O95158 308 aa14.46□□□□□ -0.09
SCARB1-201ENST00000261693 POM121L12Q8N7R1 296 aa14.46□□□□□ -0.09
SCARB1-201ENST00000261693 POLR2KP53803 58 aaKnown RBP14.46□□□□□ -0.09
SCARB1-201ENST00000261693 TRAV12-2A0A075B6T6 113 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 IGHV4OR15-8A0A075B7B6 117 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 A0A087WW49 117 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 SDHAF1A6NFY7 115 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 PMVKQ15126 192 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 TMEM170BQ5T4T1 132 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 KIR2DL4Q99706 377 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 ZNF256Q9Y2P7 627 aaPredicted RBP14.45□□□□□ -0.1
SCARB1-201ENST00000261693 CREBBPQ92793 2442 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 TMEM238LA0A1B0GVL6 79 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 A6NDX4 124 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 A6NJY4 79 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 TSPAN13O95857 204 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 PSMB2P49721 201 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 TSPEAR-AS2P59090 65 aa14.45□□□□□ -0.1
SCARB1-201ENST00000261693 H3BUA1 57 aa14.44□□□□□ -0.1
SCARB1-201ENST00000261693 VCYO14598 125 aa14.44□□□□□ -0.1
SCARB1-201ENST00000261693 CLEC2AQ6UVW9 174 aa14.44□□□□□ -0.1
SCARB1-201ENST00000261693 PIMREGQ9BSJ6 248 aa14.44□□□□□ -0.1
SCARB1-201ENST00000261693 UBE2D1P51668 147 aa14.44□□□□□ -0.1
SCARB1-201ENST00000261693 ZNRF2Q8NHG8 242 aa14.44□□□□□ -0.1
SCARB1-201ENST00000261693 DCANP1Q8TF63 244 aa14.44□□□□□ -0.1
SCARB1-201ENST00000261693 TRBV7-9A0A0J9YWB2 115 aa14.43□□□□□ -0.1
SCARB1-201ENST00000261693 A0A0J9YY99 117 aa14.43□□□□□ -0.1
SCARB1-201ENST00000261693 ZNF688P0C7X2 276 aa14.43□□□□□ -0.1
SCARB1-201ENST00000261693 HERVK_113P61574 105 aa14.43□□□□□ -0.1
SCARB1-201ENST00000261693 OPRPNQ99935 248 aaPredicted RBP14.43□□□□□ -0.1
SCARB1-201ENST00000261693 MDFICQ9P1T7 246 aa14.43□□□□□ -0.1
SCARB1-201ENST00000261693 IGLV1-40P01703 118 aa14.43□□□□□ -0.1
SCARB1-201ENST00000261693 GNLYP22749 145 aa14.43□□□□□ -0.1
SCARB1-201ENST00000261693 UTP20O75691 2785 aaKnown RBP14.42□□□□□ -0.1
SCARB1-201ENST00000261693 ID1P41134 155 aa14.42□□□□□ -0.1
SCARB1-201ENST00000261693 ZNF418Q8TF45 676 aaPredicted RBP14.42□□□□□ -0.1
SCARB1-201ENST00000261693 DLX4Q92988 240 aaPredicted RBP14.42□□□□□ -0.1
SCARB1-201ENST00000261693 FLNCQ14315 2725 aa14.42□□□□□ -0.1
SCARB1-201ENST00000261693 SMCPP49901 116 aaPredicted RBP14.42□□□□□ -0.1
SCARB1-201ENST00000261693 NDUFS8O00217 210 aa14.41□□□□□ -0.1
SCARB1-201ENST00000261693 ZNF56Q15929 161 aa14.41□□□□□ -0.1
SCARB1-201ENST00000261693 C10orf99Q6UWK7 81 aa14.41□□□□□ -0.1
SCARB1-201ENST00000261693 CFAP126Q5VTH2 177 aa14.4□□□□□ -0.1
SCARB1-201ENST00000261693 SPATA25Q9BR10 227 aa14.4□□□□□ -0.1
SCARB1-201ENST00000261693 BRI3O95415 125 aa14.4□□□□□ -0.1
SCARB1-201ENST00000261693 RPL32P62910 135 aaKnown RBP14.4□□□□□ -0.1
SCARB1-201ENST00000261693 PAPPA-AS1Q5QFB9 102 aa14.4□□□□□ -0.1
SCARB1-201ENST00000261693 TMEM141Q96I45 108 aa14.4□□□□□ -0.1
SCARB1-201ENST00000261693 TGFAP01135 160 aa14.39□□□□□ -0.11
SCARB1-201ENST00000261693 NDUFA11Q86Y39 141 aa14.39□□□□□ -0.11
SCARB1-201ENST00000261693 ZANQ9Y493 2812 aa14.39□□□□□ -0.11
SCARB1-201ENST00000261693 IGHV4-30-2A0A087WSY4 118 aa14.39□□□□□ -0.11
SCARB1-201ENST00000261693 C10orf105Q8TEF2 133 aa14.39□□□□□ -0.11
SCARB1-201ENST00000261693 PTH2Q96A98 100 aa14.39□□□□□ -0.11
SCARB1-201ENST00000261693 TIMM17AQ99595 171 aa14.39□□□□□ -0.11
SCARB1-201ENST00000261693 CCL19Q99731 98 aa14.39□□□□□ -0.11
SCARB1-201ENST00000261693 TRBV27A0A0K0K1C4 114 aa14.38□□□□□ -0.11
SCARB1-201ENST00000261693 ZNF876PQ49A33 203 aa14.38□□□□□ -0.11
SCARB1-201ENST00000261693 IGHV3-16A0A0C4DH30 117 aa14.38□□□□□ -0.11
SCARB1-201ENST00000261693 AVPP01185 164 aa14.38□□□□□ -0.11
SCARB1-201ENST00000261693 Q8N1Y9 231 aa14.38□□□□□ -0.11
SCARB1-201ENST00000261693 CFAP46Q8IYW2 2715 aa14.37□□□□□ -0.11
SCARB1-201ENST00000261693 IGHV3-64A0A075B6Q5 118 aa14.37□□□□□ -0.11
SCARB1-201ENST00000261693 LGALS9O00182 355 aa14.37□□□□□ -0.11
SCARB1-201ENST00000261693 NFE4Q86UQ8 179 aa14.37□□□□□ -0.11
SCARB1-201ENST00000261693 USP9YO00507 2555 aaPredicted RBP14.37□□□□□ -0.11
SCARB1-201ENST00000261693 IGHV3-30P01768 117 aa14.37□□□□□ -0.11
SCARB1-201ENST00000261693 CFC1BP0CG36 223 aa14.37□□□□□ -0.11
SCARB1-201ENST00000261693 CFC1P0CG37 223 aa14.37□□□□□ -0.11
SCARB1-201ENST00000261693 IGHV3-30-5P0DP03 117 aa14.37□□□□□ -0.11
SCARB1-201ENST00000261693 FOXI1Q12951 378 aa14.37□□□□□ -0.11
SCARB1-201ENST00000261693 CFHR3Q02985 330 aa14.36□□□□□ -0.11
SCARB1-201ENST00000261693 SPINK13Q1W4C9 94 aa14.36□□□□□ -0.11
SCARB1-201ENST00000261693 C1QTNF4Q9BXJ3 329 aa14.36□□□□□ -0.11
SCARB1-201ENST00000261693 J3QQQ9 107 aa14.36□□□□□ -0.11
SCARB1-201ENST00000261693 M0QY20 66 aa14.36□□□□□ -0.11
SCARB1-201ENST00000261693 UBE2D3P61077 147 aa14.36□□□□□ -0.11
SCARB1-201ENST00000261693 UBE2D2P62837 147 aa14.36□□□□□ -0.11
SCARB1-201ENST00000261693 K7EMT4 169 aa14.35□□□□□ -0.11
SCARB1-201ENST00000261693 ATP5J2P56134 94 aa14.35□□□□□ -0.11
SCARB1-201ENST00000261693 SLC25A29Q8N8R3 303 aa14.35□□□□□ -0.11
SCARB1-201ENST00000261693 C9orf85Q96MD7 179 aa14.35□□□□□ -0.11
SCARB1-201ENST00000261693 LGALS3P17931 250 aaKnown RBP14.35□□□□□ -0.11
SCARB1-201ENST00000261693 AMELXQ99217 191 aa14.35□□□□□ -0.11
SCARB1-201ENST00000261693 TCL1BO95988 128 aa14.34□□□□□ -0.11
SCARB1-201ENST00000261693 MSMBP08118 114 aa14.34□□□□□ -0.11
SCARB1-201ENST00000261693 SYT8Q8NBV8 401 aa14.34□□□□□ -0.11
SCARB1-201ENST00000261693 A0A0J9YX75 114 aa14.33□□□□□ -0.11
SCARB1-201ENST00000261693 TRBV6-5A0A0K0K1A5 114 aa14.33□□□□□ -0.11
SCARB1-201ENST00000261693 SCGB1A1P11684 91 aa14.33□□□□□ -0.11
SCARB1-201ENST00000261693 P0DMU3 169 aa14.33□□□□□ -0.12
SCARB1-201ENST00000261693 FAM231AP0DMU4 169 aa14.33□□□□□ -0.12
SCARB1-201ENST00000261693 FAM231CP0DMU5 169 aa14.33□□□□□ -0.12
SCARB1-201ENST00000261693 DUX5Q96PT3 197 aa14.33□□□□□ -0.12
SCARB1-201ENST00000261693 CENPEQ02224 2701 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms