RNA–Protein interactions for RNA: ENST00000261692.6

CDK2AP1-201, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK2AP1, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-201ENST00000261692 ZNF575Q86XF7 245 aa17.21■□□□□ 0.35
CDK2AP1-201ENST00000261692 SPXQ9BT56 116 aa17.21■□□□□ 0.35
CDK2AP1-201ENST00000261692 APCSP02743 223 aa17.21■□□□□ 0.35
CDK2AP1-201ENST00000261692 MED14OSP0DP75 135 aa17.21■□□□□ 0.35
CDK2AP1-201ENST00000261692 IL17DQ8TAD2 202 aa17.21■□□□□ 0.35
CDK2AP1-201ENST00000261692 TEX48A0A1B0GUV7 120 aa17.2■□□□□ 0.34
CDK2AP1-201ENST00000261692 DEFB4AO15263 64 aa17.2■□□□□ 0.34
CDK2AP1-201ENST00000261692 RNASE3P12724 160 aaKnown RBP17.2■□□□□ 0.34
CDK2AP1-201ENST00000261692 U3KQK5 164 aa17.2■□□□□ 0.34
CDK2AP1-201ENST00000261692 A0A0J9YWU9 116 aa17.19■□□□□ 0.34
CDK2AP1-201ENST00000261692 C9orf85Q96MD7 179 aa17.19■□□□□ 0.34
CDK2AP1-201ENST00000261692 NOP10Q9NPE3 64 aaKnown RBP17.19■□□□□ 0.34
CDK2AP1-201ENST00000261692 LYRM9A8MSI8 78 aa17.18■□□□□ 0.34
CDK2AP1-201ENST00000261692 H3BVH4 76 aa17.18■□□□□ 0.34
CDK2AP1-201ENST00000261692 ARMS2P0C7Q2 107 aa17.18■□□□□ 0.34
CDK2AP1-201ENST00000261692 AMTP48728 403 aa17.18■□□□□ 0.34
CDK2AP1-201ENST00000261692 TSKUQ8WUA8 353 aa17.18■□□□□ 0.34
CDK2AP1-201ENST00000261692 FAM231BA6NCW3 169 aa17.18■□□□□ 0.34
CDK2AP1-201ENST00000261692 FER1L6-AS1Q8NA97 138 aa17.18■□□□□ 0.34
CDK2AP1-201ENST00000261692 GFRA4Q9GZZ7 299 aa17.18■□□□□ 0.34
CDK2AP1-201ENST00000261692 COL7A1Q02388 2944 aa17.17■□□□□ 0.34
CDK2AP1-201ENST00000261692 OR5AL1P0C617 328 aa17.17■□□□□ 0.34
CDK2AP1-201ENST00000261692 SPART-AS1P0CW21 52 aa17.17■□□□□ 0.34
CDK2AP1-201ENST00000261692 LGALS9BQ3B8N2 356 aa17.17■□□□□ 0.34
CDK2AP1-201ENST00000261692 SSBP4Q9BWG4 385 aaPredicted RBP17.17■□□□□ 0.34
CDK2AP1-201ENST00000261692 DKK2Q9UBU2 259 aa17.17■□□□□ 0.34
CDK2AP1-201ENST00000261692 TENM3Q9P273 2699 aa17.17■□□□□ 0.34
CDK2AP1-201ENST00000261692 M0R2P5 195 aa17.16■□□□□ 0.34
CDK2AP1-201ENST00000261692 SNAI2O43623 268 aa17.16■□□□□ 0.34
CDK2AP1-201ENST00000261692 IGLC6P0CF74 106 aa17.16■□□□□ 0.34
CDK2AP1-201ENST00000261692 SRIP30626 198 aa17.16■□□□□ 0.34
CDK2AP1-201ENST00000261692 SCRT2Q9NQ03 307 aa17.16■□□□□ 0.34
CDK2AP1-201ENST00000261692 PHLDA3Q9Y5J5 127 aa17.16■□□□□ 0.34
CDK2AP1-201ENST00000261692 F2Z2F3 143 aa17.15■□□□□ 0.34
CDK2AP1-201ENST00000261692 SPINK4O60575 86 aa17.15■□□□□ 0.34
CDK2AP1-201ENST00000261692 PMCHL1Q16048 86 aa17.15■□□□□ 0.34
CDK2AP1-201ENST00000261692 FAM222AQ5U5X8 452 aa17.15■□□□□ 0.34
CDK2AP1-201ENST00000261692 MRPL54Q6P161 138 aaKnown RBP17.15■□□□□ 0.34
CDK2AP1-201ENST00000261692 BORCS7Q96B45 105 aa17.15■□□□□ 0.34
CDK2AP1-201ENST00000261692 DMRTA1Q5VZB9 504 aa17.14■□□□□ 0.33
CDK2AP1-201ENST00000261692 TPPP3Q9BW30 176 aa17.14■□□□□ 0.33
CDK2AP1-201ENST00000261692 C20orf202A1L168 122 aa17.14■□□□□ 0.33
CDK2AP1-201ENST00000261692 FOXA3P55318 350 aaPredicted RBP17.14■□□□□ 0.33
CDK2AP1-201ENST00000261692 KRTDAPP60985 99 aa17.14■□□□□ 0.33
CDK2AP1-201ENST00000261692 SYT8Q8NBV8 401 aa17.14■□□□□ 0.33
CDK2AP1-201ENST00000261692 PTH2Q96A98 100 aa17.14■□□□□ 0.33
CDK2AP1-201ENST00000261692 TRGV1A0A0A0MS02 117 aa17.13■□□□□ 0.33
CDK2AP1-201ENST00000261692 PIK3CD-AS1Q5SR53 167 aa17.13■□□□□ 0.33
CDK2AP1-201ENST00000261692 GTSF1Q8WW33 167 aa17.13■□□□□ 0.33
CDK2AP1-201ENST00000261692 RASL10AQ92737 203 aa17.13■□□□□ 0.33
CDK2AP1-201ENST00000261692 GAGE1Q13065 139 aa17.12■□□□□ 0.33
CDK2AP1-201ENST00000261692 UQCR10Q9UDW1 63 aa17.12■□□□□ 0.33
CDK2AP1-201ENST00000261692 PAM16Q9Y3D7 125 aa17.12■□□□□ 0.33
CDK2AP1-201ENST00000261692 HIGD1CA8MV81 97 aa17.11■□□□□ 0.33
CDK2AP1-201ENST00000261692 CTRLP40313 264 aa17.11■□□□□ 0.33
CDK2AP1-201ENST00000261692 ZNF876PQ49A33 203 aa17.11■□□□□ 0.33
CDK2AP1-201ENST00000261692 CELA1Q9UNI1 258 aa17.11■□□□□ 0.33
CDK2AP1-201ENST00000261692 SPANXN1Q5VSR9 72 aa17.1■□□□□ 0.33
CDK2AP1-201ENST00000261692 LYZL1Q6UWQ5 148 aa17.1■□□□□ 0.33
CDK2AP1-201ENST00000261692 Q6ZTI0 123 aa17.1■□□□□ 0.33
CDK2AP1-201ENST00000261692 Q8N976 141 aa17.1■□□□□ 0.33
CDK2AP1-201ENST00000261692 C11orf45Q8TAV5 145 aa17.1■□□□□ 0.33
CDK2AP1-201ENST00000261692 C18orf32Q8TCD1 76 aa17.1■□□□□ 0.33
CDK2AP1-201ENST00000261692 MRPL16Q9NX20 251 aaKnown RBP17.1■□□□□ 0.33
CDK2AP1-201ENST00000261692 PMCHP20382 165 aa17.1■□□□□ 0.33
CDK2AP1-201ENST00000261692 CACNG7P62955 275 aa17.1■□□□□ 0.33
CDK2AP1-201ENST00000261692 LINC00612Q8N6U2 182 aa17.1■□□□□ 0.33
CDK2AP1-201ENST00000261692 NUP35Q8NFH5 326 aa17.1■□□□□ 0.33
CDK2AP1-201ENST00000261692 EDA2RQ9HAV5 297 aa17.1■□□□□ 0.33
CDK2AP1-201ENST00000261692 M0R381 172 aa17.09■□□□□ 0.33
CDK2AP1-201ENST00000261692 DEFB130BP0DP73 79 aa17.09■□□□□ 0.33
CDK2AP1-201ENST00000261692 DEFB130AP0DP74 79 aa17.09■□□□□ 0.33
CDK2AP1-201ENST00000261692 DAD1P61803 113 aa17.09■□□□□ 0.33
CDK2AP1-201ENST00000261692 OR10AG1Q8NH19 301 aa17.09■□□□□ 0.33
CDK2AP1-201ENST00000261692 CNFNQ9BYD5 112 aa17.09■□□□□ 0.33
CDK2AP1-201ENST00000261692 GAGE12BA1L429 117 aa17.08■□□□□ 0.32
CDK2AP1-201ENST00000261692 GAGE7O76087 117 aa17.08■□□□□ 0.32
CDK2AP1-201ENST00000261692 GAGE12FP0CL80 117 aa17.08■□□□□ 0.32
CDK2AP1-201ENST00000261692 GAGE12GP0CL81 117 aa17.08■□□□□ 0.32
CDK2AP1-201ENST00000261692 GAGE12IP0CL82 117 aa17.08■□□□□ 0.32
CDK2AP1-201ENST00000261692 KIAA1644Q3SXP7 199 aa17.08■□□□□ 0.32
CDK2AP1-201ENST00000261692 NIT1Q86X76 327 aa17.08■□□□□ 0.32
CDK2AP1-201ENST00000261692 C18orf15Q96N68 181 aa17.08■□□□□ 0.32
CDK2AP1-201ENST00000261692 TRGV2A0A075B6R0 118 aa17.07■□□□□ 0.32
CDK2AP1-201ENST00000261692 HSBP1O75506 76 aa17.07■□□□□ 0.32
CDK2AP1-201ENST00000261692 NXPH4O95158 308 aa17.07■□□□□ 0.32
CDK2AP1-201ENST00000261692 SPATA45Q537H7 98 aa17.07■□□□□ 0.32
CDK2AP1-201ENST00000261692 COL5A1-AS1Q5SY13 56 aa17.07■□□□□ 0.32
CDK2AP1-201ENST00000261692 PGLYRP4Q96LB8 373 aa17.07■□□□□ 0.32
CDK2AP1-201ENST00000261692 A0A1B0GXF2 115 aa17.07■□□□□ 0.32
CDK2AP1-201ENST00000261692 C3orf79P0CE67 100 aa17.07■□□□□ 0.32
CDK2AP1-201ENST00000261692 STAB2Q8WWQ8 2551 aa17.06■□□□□ 0.32
CDK2AP1-201ENST00000261692 IGHV4-4A0A075B6R2 117 aa17.06■□□□□ 0.32
CDK2AP1-201ENST00000261692 HBBP68871 147 aa17.06■□□□□ 0.32
CDK2AP1-201ENST00000261692 SLAQ13239 276 aa17.06■□□□□ 0.32
CDK2AP1-201ENST00000261692 ALKBH7Q9BT30 221 aaPredicted RBP17.05■□□□□ 0.32
CDK2AP1-201ENST00000261692 MUC21A0A0G2JKD1 596 aa17.04■□□□□ 0.32
CDK2AP1-201ENST00000261692 MUC21A0A140T8X8 626 aa17.04■□□□□ 0.32
CDK2AP1-201ENST00000261692 A0A1B0GUT8 65 aa17.04■□□□□ 0.32
CDK2AP1-201ENST00000261692 A8MWV9 139 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms