RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 ZNF883P0CG24 379 aa5.48□□□□□ -1.53
CSDE1-201ENST00000261443 LINC01600Q96MT4 127 aa5.48□□□□□ -1.53
CSDE1-201ENST00000261443 PHLDA3Q9Y5J5 127 aa5.48□□□□□ -1.53
CSDE1-201ENST00000261443 IGF2RP11717 2491 aa5.48□□□□□ -1.53
CSDE1-201ENST00000261443 IGIPA6NJ69 53 aa5.48□□□□□ -1.53
CSDE1-201ENST00000261443 LY6LH3BQJ8 138 aa5.48□□□□□ -1.53
CSDE1-201ENST00000261443 BUB3O43684 328 aa5.48□□□□□ -1.53
CSDE1-201ENST00000261443 ZNRF2Q8NHG8 242 aa5.48□□□□□ -1.53
CSDE1-201ENST00000261443 TRIAP1O43715 76 aa5.48□□□□□ -1.53
CSDE1-201ENST00000261443 PPP1R17O96001 155 aa5.48□□□□□ -1.53
CSDE1-201ENST00000261443 RPL39P62891 51 aaKnown RBP5.48□□□□□ -1.53
CSDE1-201ENST00000261443 DUX3Q96PT4 197 aa5.48□□□□□ -1.53
CSDE1-201ENST00000261443 TRBV30A0A0K0K1B3 111 aa5.47□□□□□ -1.53
CSDE1-201ENST00000261443 C9orf47Q6ZRZ4 202 aa5.47□□□□□ -1.53
CSDE1-201ENST00000261443 NPBQ8NG41 125 aa5.47□□□□□ -1.53
CSDE1-201ENST00000261443 TMEM141Q96I45 108 aa5.47□□□□□ -1.53
CSDE1-201ENST00000261443 DYNLRB1Q9NP97 96 aa5.47□□□□□ -1.53
CSDE1-201ENST00000261443 VPS13CQ709C8 3753 aa5.47□□□□□ -1.53
CSDE1-201ENST00000261443 H7C423 109 aa5.47□□□□□ -1.53
CSDE1-201ENST00000261443 PRR9Q5T870 116 aa5.47□□□□□ -1.53
CSDE1-201ENST00000261443 GPHB5Q86YW7 130 aa5.47□□□□□ -1.53
CSDE1-201ENST00000261443 NRGNQ92686 78 aa5.47□□□□□ -1.53
CSDE1-201ENST00000261443 FAM215AQ9Y5M1 114 aa5.47□□□□□ -1.53
CSDE1-201ENST00000261443 SPG11Q96JI7 2443 aa5.46□□□□□ -1.53
CSDE1-201ENST00000261443 IGHV3-64A0A075B6Q5 118 aa5.46□□□□□ -1.53
CSDE1-201ENST00000261443 IGHV3-49A0A0A0MS15 119 aa5.46□□□□□ -1.53
CSDE1-201ENST00000261443 M0R2P5 195 aa5.46□□□□□ -1.53
CSDE1-201ENST00000261443 LINC00694P0DN24 101 aa5.46□□□□□ -1.53
CSDE1-201ENST00000261443 NDPQ00604 133 aa5.46□□□□□ -1.53
CSDE1-201ENST00000261443 DEFB123Q8N688 67 aa5.46□□□□□ -1.53
CSDE1-201ENST00000261443 TMEM101Q96IK0 257 aa5.46□□□□□ -1.53
CSDE1-201ENST00000261443 ARHGAP32A7KAX9 2087 aa5.46□□□□□ -1.53
CSDE1-201ENST00000261443 TRBV7-7A0A0K0K1E9 115 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 FAM236AA0A1B0GUQ0 79 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 FAM236BA0A1B0GV22 79 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 FAM240AA0A1B0GVK7 77 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 LEPROTO15243 131 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 BSPH1Q075Z2 132 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 ZNF876PQ49A33 203 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 RNASE6Q93091 150 aaKnown RBP5.46□□□□□ -1.54
CSDE1-201ENST00000261443 SPTBN4Q9H254 2564 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 OTOGLQ3ZCN5 2332 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 H3BT86 120 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 IGF1P05019 195 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 C9orf153Q5TBE3 101 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 MRPL53Q96EL3 112 aaKnown RBP5.46□□□□□ -1.54
CSDE1-201ENST00000261443 TIMM17AQ99595 171 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 DPM3Q9P2X0 92 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 CSDC2Q9Y534 153 aaKnown RBP5.46□□□□□ -1.54
CSDE1-201ENST00000261443 CENPEQ02224 2701 aa5.46□□□□□ -1.54
CSDE1-201ENST00000261443 TRGV11A0A075B6L2 103 aa5.45□□□□□ -1.54
CSDE1-201ENST00000261443 COX6CP09669 75 aa5.45□□□□□ -1.54
CSDE1-201ENST00000261443 DNAJC30Q96LL9 226 aa5.45□□□□□ -1.54
CSDE1-201ENST00000261443 ZFAND3Q9H8U3 227 aa5.45□□□□□ -1.54
CSDE1-201ENST00000261443 CSMD2Q7Z408 3487 aa5.45□□□□□ -1.54
CSDE1-201ENST00000261443 ATP5J2P56134 94 aa5.45□□□□□ -1.54
CSDE1-201ENST00000261443 ICOSQ9Y6W8 199 aa5.45□□□□□ -1.54
CSDE1-201ENST00000261443 TRAV21A0A0B4J279 112 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 TMEM223A0PJW6 202 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 PRSS2P07478 247 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 CD3EP07766 207 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 LY6DQ14210 128 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 C15orf32Q32M92 178 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 IGFL2Q6UWQ7 119 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 C16orf92Q96LL3 132 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 LYNX1G3V0Z9 82 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 VCYO14598 125 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 LYNX1P0DP58 116 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 ZNF22P17026 224 aaPredicted RBP5.44□□□□□ -1.54
CSDE1-201ENST00000261443 UBE2E1P51965 193 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 EBI3Q14213 229 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 C5orf47Q569G3 176 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 LOC107984640A0A0U1RRK4 108 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 CLPSL1A2RUU4 121 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 OOSP1A8MZH6 123 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 NDUFA7O95182 113 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 C3orf22Q8N5N4 141 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 CLEC2BQ92478 149 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 METTL26Q96S19 204 aa5.44□□□□□ -1.54
CSDE1-201ENST00000261443 MUC6Q6W4X9 2439 aa5.43□□□□□ -1.54
CSDE1-201ENST00000261443 GNRH2O43555 120 aa5.43□□□□□ -1.54
CSDE1-201ENST00000261443 POLR2KP53803 58 aaKnown RBP5.43□□□□□ -1.54
CSDE1-201ENST00000261443 DEFB121Q5J5C9 76 aa5.43□□□□□ -1.54
CSDE1-201ENST00000261443 CEMP1Q6PRD7 247 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-201ENST00000261443 LENEPQ9Y5L5 61 aa5.43□□□□□ -1.54
CSDE1-201ENST00000261443 A0A0J9YXY3 114 aa5.43□□□□□ -1.54
CSDE1-201ENST00000261443 SDHAF1A6NFY7 115 aa5.43□□□□□ -1.54
CSDE1-201ENST00000261443 F5H697 171 aa5.43□□□□□ -1.54
CSDE1-201ENST00000261443 NPFFO15130 113 aa5.43□□□□□ -1.54
CSDE1-201ENST00000261443 CLEC19AQ6UXS0 136 aa5.43□□□□□ -1.54
CSDE1-201ENST00000261443 POM121L12Q8N7R1 296 aa5.43□□□□□ -1.54
CSDE1-201ENST00000261443 OPRPNQ99935 248 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-201ENST00000261443 IMUPQ9GZP8 106 aa5.43□□□□□ -1.54
CSDE1-201ENST00000261443 ZNF256Q9Y2P7 627 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-201ENST00000261443 IGHV4OR15-8A0A075B7B6 117 aa5.42□□□□□ -1.54
CSDE1-201ENST00000261443 A0A087WW49 117 aa5.42□□□□□ -1.54
CSDE1-201ENST00000261443 RNASE4P34096 147 aaKnown RBP5.42□□□□□ -1.54
CSDE1-201ENST00000261443 ZFAND2AQ8N6M9 145 aa5.42□□□□□ -1.54
CSDE1-201ENST00000261443 ADARB2-AS1A8MUL3 147 aa5.42□□□□□ -1.54
CSDE1-201ENST00000261443 UQCRQO14949 82 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms