RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 S100A4P26447 101 aaKnown RBP13.05□□□□□ -0.32
SSB-201ENST00000260956 IGHV3-16A0A0C4DH30 117 aa13.04□□□□□ -0.32
SSB-201ENST00000260956 FGF6P10767 208 aa13.04□□□□□ -0.32
SSB-201ENST00000260956 AP1S3Q96PC3 154 aa13.04□□□□□ -0.32
SSB-201ENST00000260956 ZMAT4Q9H898 229 aa13.04□□□□□ -0.32
SSB-201ENST00000260956 ZMAT5Q9UDW3 170 aaKnown RBP13.04□□□□□ -0.32
SSB-201ENST00000260956 GOLT1BQ9Y3E0 138 aa13.04□□□□□ -0.32
SSB-201ENST00000260956 TRAV12-3A0A0B4J271 114 aa13.03□□□□□ -0.32
SSB-201ENST00000260956 ANKRD39Q53RE8 183 aa13.03□□□□□ -0.32
SSB-201ENST00000260956 C14orf178Q8N769 122 aaPredicted RBP13.03□□□□□ -0.32
SSB-201ENST00000260956 STPG4Q8N801 248 aa13.03□□□□□ -0.32
SSB-201ENST00000260956 C20orf78Q9BR46 151 aa13.03□□□□□ -0.32
SSB-201ENST00000260956 ADARB2-AS1A8MUL3 147 aa13.02□□□□□ -0.32
SSB-201ENST00000260956 DUSP14O95147 198 aaKnown RBP13.02□□□□□ -0.32
SSB-201ENST00000260956 ODF1Q14990 250 aa13.02□□□□□ -0.32
SSB-201ENST00000260956 OR9G4Q8NGQ1 327 aa13.02□□□□□ -0.32
SSB-201ENST00000260956 CITED2Q99967 270 aaPredicted RBP13.02□□□□□ -0.32
SSB-201ENST00000260956 COX8AP10176 69 aa13.02□□□□□ -0.33
SSB-201ENST00000260956 FAM159AQ6UWV7 190 aa13.02□□□□□ -0.33
SSB-201ENST00000260956 OR11H1Q8NG94 326 aa13.02□□□□□ -0.33
SSB-201ENST00000260956 OR1N2Q8NGR9 330 aa13.02□□□□□ -0.33
SSB-201ENST00000260956 RPL39LQ96EH5 51 aaKnown RBP13.02□□□□□ -0.33
SSB-201ENST00000260956 HSBP1L1C9JCN9 74 aa13.01□□□□□ -0.33
SSB-201ENST00000260956 CDKN1BP46527 198 aa13.01□□□□□ -0.33
SSB-201ENST00000260956 SUMO2P61956 95 aaKnown RBP13.01□□□□□ -0.33
SSB-201ENST00000260956 FHL3Q13643 280 aa13.01□□□□□ -0.33
SSB-201ENST00000260956 LAGE3Q14657 143 aa13.01□□□□□ -0.33
SSB-201ENST00000260956 SLC25A34Q6PIV7 304 aa13.01□□□□□ -0.33
SSB-201ENST00000260956 TRAV12-2A0A075B6T6 113 aa13□□□□□ -0.33
SSB-201ENST00000260956 RBMY1BA6NDE4 496 aaKnown RBP13□□□□□ -0.33
SSB-201ENST00000260956 RBMY1EA6NEQ0 496 aaKnown RBP13□□□□□ -0.33
SSB-201ENST00000260956 RBMY1DP0C7P1 496 aaKnown RBP13□□□□□ -0.33
SSB-201ENST00000260956 RBMY1A1P0DJD3 496 aaKnown RBP13□□□□□ -0.33
SSB-201ENST00000260956 RBMY1CP0DJD4 496 aa13□□□□□ -0.33
SSB-201ENST00000260956 RPL32P62910 135 aaKnown RBP13□□□□□ -0.33
SSB-201ENST00000260956 RBMY1FQ15415 496 aaKnown RBP13□□□□□ -0.33
SSB-201ENST00000260956 C2orf91Q6ZV80 131 aa13□□□□□ -0.33
SSB-201ENST00000260956 TMEM61Q8N0U2 210 aa13□□□□□ -0.33
SSB-201ENST00000260956 DLX4Q92988 240 aaPredicted RBP13□□□□□ -0.33
SSB-201ENST00000260956 DUX3Q96PT4 197 aa13□□□□□ -0.33
SSB-201ENST00000260956 DKK2Q9UBU2 259 aa13□□□□□ -0.33
SSB-201ENST00000260956 TCAPO15273 167 aa12.99□□□□□ -0.33
SSB-201ENST00000260956 SMIM17P0DL12 118 aa12.99□□□□□ -0.33
SSB-201ENST00000260956 SPINK13Q1W4C9 94 aa12.99□□□□□ -0.33
SSB-201ENST00000260956 C18orf15Q96N68 181 aa12.99□□□□□ -0.33
SSB-201ENST00000260956 FBN3Q75N90 2809 aa12.99□□□□□ -0.33
SSB-201ENST00000260956 CD7P09564 240 aa12.99□□□□□ -0.33
SSB-201ENST00000260956 HLA-DRB4P13762 266 aa12.99□□□□□ -0.33
SSB-201ENST00000260956 COL5A1-AS1Q5SY13 56 aa12.99□□□□□ -0.33
SSB-201ENST00000260956 JPT2Q9H910 190 aa12.99□□□□□ -0.33
SSB-201ENST00000260956 HLA-DRB4X5D2U9 266 aa12.99□□□□□ -0.33
SSB-201ENST00000260956 SORL1Q92673 2214 aa12.99□□□□□ -0.33
SSB-201ENST00000260956 IGHV1OR15-1A0A075B7D0 117 aa12.98□□□□□ -0.33
SSB-201ENST00000260956 K7EMI3 77 aa12.98□□□□□ -0.33
SSB-201ENST00000260956 IGKV3-20P01619 116 aa12.98□□□□□ -0.33
SSB-201ENST00000260956 Q8N1Y9 231 aa12.98□□□□□ -0.33
SSB-201ENST00000260956 KLHL30-AS1Q8NEE0 82 aa12.98□□□□□ -0.33
SSB-201ENST00000260956 MDFICQ9P1T7 246 aa12.98□□□□□ -0.33
SSB-201ENST00000260956 PEMTQ9UBM1 199 aa12.98□□□□□ -0.33
SSB-201ENST00000260956 BATFQ16520 125 aa12.97□□□□□ -0.33
SSB-201ENST00000260956 NOTCH1P46531 2555 aa12.97□□□□□ -0.33
SSB-201ENST00000260956 A0A1W2PRX2 142 aa12.96□□□□□ -0.33
SSB-201ENST00000260956 KNCNA6PVL3 124 aa12.96□□□□□ -0.33
SSB-201ENST00000260956 H3BMM0 161 aa12.96□□□□□ -0.33
SSB-201ENST00000260956 ATP5LO75964 103 aa12.96□□□□□ -0.33
SSB-201ENST00000260956 NSUN5P1Q3KNT7 163 aa12.96□□□□□ -0.33
SSB-201ENST00000260956 RAX2Q96IS3 184 aa12.96□□□□□ -0.33
SSB-201ENST00000260956 HHLA3Q9XRX5 114 aa12.96□□□□□ -0.33
SSB-201ENST00000260956 MGPP08493 103 aa12.96□□□□□ -0.34
SSB-201ENST00000260956 HINT1P49773 126 aaPredicted RBP12.96□□□□□ -0.34
SSB-201ENST00000260956 DEFB131AP59861 70 aa12.96□□□□□ -0.34
SSB-201ENST00000260956 DEFB114Q30KQ6 69 aa12.96□□□□□ -0.34
SSB-201ENST00000260956 NOTCH3Q9UM47 2321 aa12.95□□□□□ -0.34
SSB-201ENST00000260956 SUMO4Q6EEV6 95 aa12.95□□□□□ -0.34
SSB-201ENST00000260956 BOD1L2Q8IYS8 172 aa12.95□□□□□ -0.34
SSB-201ENST00000260956 TOMM6Q96B49 74 aa12.95□□□□□ -0.34
SSB-201ENST00000260956 PPP1R17O96001 155 aa12.94□□□□□ -0.34
SSB-201ENST00000260956 POLR2KP53803 58 aaKnown RBP12.94□□□□□ -0.34
SSB-201ENST00000260956 ORMDL2Q53FV1 153 aa12.94□□□□□ -0.34
SSB-201ENST00000260956 MAP6D1Q9H9H5 199 aa12.94□□□□□ -0.34
SSB-201ENST00000260956 ZNF256Q9Y2P7 627 aaPredicted RBP12.94□□□□□ -0.34
SSB-201ENST00000260956 TRBV6-5A0A0K0K1A5 114 aa12.93□□□□□ -0.34
SSB-201ENST00000260956 DLEU1O43261 78 aa12.93□□□□□ -0.34
SSB-201ENST00000260956 CRYGDP07320 174 aa12.93□□□□□ -0.34
SSB-201ENST00000260956 MORN3Q6PF18 240 aaPredicted RBP12.93□□□□□ -0.34
SSB-201ENST00000260956 NDUFA11Q86Y39 141 aa12.93□□□□□ -0.34
SSB-201ENST00000260956 MEGF8Q7Z7M0 2845 aa12.93□□□□□ -0.34
SSB-201ENST00000260956 ZNF124Q15973 351 aa12.93□□□□□ -0.34
SSB-201ENST00000260956 SPAG8Q99932 426 aaPredicted RBP12.93□□□□□ -0.34
SSB-201ENST00000260956 MPV17L2Q567V2 206 aa12.92□□□□□ -0.34
SSB-201ENST00000260956 KHDC1LQ5JSQ8 128 aa12.92□□□□□ -0.34
SSB-201ENST00000260956 BVES-AS1Q5T3Y7 98 aa12.92□□□□□ -0.34
SSB-201ENST00000260956 TSSC4Q9Y5U2 329 aaPredicted RBP12.92□□□□□ -0.34
SSB-201ENST00000260956 TRAV12-1A0A0B4J245 112 aa12.91□□□□□ -0.34
SSB-201ENST00000260956 CD300EQ496F6 205 aaPredicted RBP12.91□□□□□ -0.34
SSB-201ENST00000260956 CLUHP3Q96NS8 147 aa12.91□□□□□ -0.34
SSB-201ENST00000260956 A0A087WWL8 130 aa12.91□□□□□ -0.34
SSB-201ENST00000260956 A0A087WX48 190 aa12.91□□□□□ -0.34
SSB-201ENST00000260956 NUDT3O95989 172 aa12.91□□□□□ -0.34
SSB-201ENST00000260956 TMEM208Q9BTX3 173 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms