RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 C14orf144Q96I85 54 aa11.26□□□□□ -0.61
CCDC90B-201ENST00000260054 NAT8BQ9UHF3 227 aa11.26□□□□□ -0.61
CCDC90B-201ENST00000260054 GAGE12BA1L429 117 aa11.25□□□□□ -0.61
CCDC90B-201ENST00000260054 F2Z2F3 143 aa11.25□□□□□ -0.61
CCDC90B-201ENST00000260054 M0R381 172 aa11.25□□□□□ -0.61
CCDC90B-201ENST00000260054 GAGE7O76087 117 aa11.25□□□□□ -0.61
CCDC90B-201ENST00000260054 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
CCDC90B-201ENST00000260054 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
CCDC90B-201ENST00000260054 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
CCDC90B-201ENST00000260054 LBHQ53QV2 105 aaPredicted RBP11.25□□□□□ -0.61
CCDC90B-201ENST00000260054 LINC00612Q8N6U2 182 aa11.25□□□□□ -0.61
CCDC90B-201ENST00000260054 CNFNQ9BYD5 112 aa11.25□□□□□ -0.61
CCDC90B-201ENST00000260054 NXPH4O95158 308 aa11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 DEFB130BP0DP73 79 aa11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 DEFB130AP0DP74 79 aa11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 FAM3BP58499 235 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 SPANXN1Q5VSR9 72 aa11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 CDPF1Q6NVV7 123 aa11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 PTH2Q96A98 100 aa11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 PACRGQ96M98 296 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 EDA2RQ9HAV5 297 aa11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 FABP4P15090 132 aa11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 DDTP30046 118 aa11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 COA6Q5JTJ3 125 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 MSRB1Q9NZV6 116 aa11.24□□□□□ -0.61
CCDC90B-201ENST00000260054 IGHV4-4A0A075B6R2 117 aa11.23□□□□□ -0.61
CCDC90B-201ENST00000260054 TEX48A0A1B0GUV7 120 aa11.23□□□□□ -0.61
CCDC90B-201ENST00000260054 NTF3P20783 257 aa11.23□□□□□ -0.61
CCDC90B-201ENST00000260054 JOSD1Q15040 202 aaPredicted RBP11.23□□□□□ -0.61
CCDC90B-201ENST00000260054 SYT8Q8NBV8 401 aa11.23□□□□□ -0.61
CCDC90B-201ENST00000260054 IMMP2LQ96T52 175 aa11.23□□□□□ -0.61
CCDC90B-201ENST00000260054 HIST1H2BLQ99880 126 aa11.23□□□□□ -0.61
CCDC90B-201ENST00000260054 JPT2Q9H910 190 aa11.23□□□□□ -0.61
CCDC90B-201ENST00000260054 CACNG7P62955 275 aa11.22□□□□□ -0.61
CCDC90B-201ENST00000260054 C12orf74Q32Q52 190 aa11.22□□□□□ -0.61
CCDC90B-201ENST00000260054 PIK3CD-AS1Q5SR53 167 aa11.22□□□□□ -0.61
CCDC90B-201ENST00000260054 WDR73Q6P4I2 378 aa11.22□□□□□ -0.61
CCDC90B-201ENST00000260054 C11orf45Q8TAV5 145 aa11.22□□□□□ -0.61
CCDC90B-201ENST00000260054 TGP01266 2768 aa11.21□□□□□ -0.61
CCDC90B-201ENST00000260054 TRGV2A0A075B6R0 118 aa11.21□□□□□ -0.61
CCDC90B-201ENST00000260054 A0A1B0GUT8 65 aa11.21□□□□□ -0.61
CCDC90B-201ENST00000260054 DAD1P61803 113 aa11.21□□□□□ -0.61
CCDC90B-201ENST00000260054 PDZD11Q5EBL8 140 aa11.21□□□□□ -0.61
CCDC90B-201ENST00000260054 POM121L12Q8N7R1 296 aa11.21□□□□□ -0.61
CCDC90B-201ENST00000260054 NANOS2P60321 138 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-201ENST00000260054 TWIST1Q15672 202 aa11.2□□□□□ -0.62
CCDC90B-201ENST00000260054 BORCS7Q96B45 105 aa11.2□□□□□ -0.62
CCDC90B-201ENST00000260054 C18orf15Q96N68 181 aa11.2□□□□□ -0.62
CCDC90B-201ENST00000260054 NDUFAF3Q9BU61 184 aa11.2□□□□□ -0.62
CCDC90B-201ENST00000260054 KCNIP4Q6PIL6 250 aa11.2□□□□□ -0.62
CCDC90B-201ENST00000260054 C2orf88Q9BSF0 95 aa11.2□□□□□ -0.62
CCDC90B-201ENST00000260054 SAMD10Q9BYL1 202 aa11.2□□□□□ -0.62
CCDC90B-201ENST00000260054 CFAP126Q5VTH2 177 aa11.19□□□□□ -0.62
CCDC90B-201ENST00000260054 MRPL54Q6P161 138 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-201ENST00000260054 Q6ZTC4 211 aa11.19□□□□□ -0.62
CCDC90B-201ENST00000260054 A8MWV9 139 aa11.18□□□□□ -0.62
CCDC90B-201ENST00000260054 RS1O15537 224 aa11.18□□□□□ -0.62
CCDC90B-201ENST00000260054 IGHV3-53P01767 116 aa11.18□□□□□ -0.62
CCDC90B-201ENST00000260054 ZNF479Q96JC4 524 aa11.18□□□□□ -0.62
CCDC90B-201ENST00000260054 BTF3L4Q96K17 158 aa11.18□□□□□ -0.62
CCDC90B-201ENST00000260054 A0A087WWL8 130 aa11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 TRAV4A0A0B4J268 109 aa11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 A0A1B0GXF2 115 aa11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 CRYGDP07320 174 aa11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 EVI2AP22794 236 aa11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 RAB4BP61018 213 aa11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 RIGQ13278 110 aa11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 OR4C5Q8NGB2 326 aa11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 AP1S3Q96PC3 154 aa11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 NACAE9PAV3 2078 aa11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 UFSP1Q6NVU6 142 aa11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 C14orf178Q8N769 122 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 KIF25-AS1Q9Y6Z4 181 aa11.17□□□□□ -0.62
CCDC90B-201ENST00000260054 TRAV9-1A0A075B6T8 112 aa11.16□□□□□ -0.62
CCDC90B-201ENST00000260054 IGHV3-73A0A0B4J1V6 119 aa11.16□□□□□ -0.62
CCDC90B-201ENST00000260054 A0A1B0GV90 55 aa11.16□□□□□ -0.62
CCDC90B-201ENST00000260054 ATP5G1P05496 136 aa11.16□□□□□ -0.62
CCDC90B-201ENST00000260054 CAMPP49913 170 aa11.16□□□□□ -0.62
CCDC90B-201ENST00000260054 HBBP68871 147 aa11.16□□□□□ -0.62
CCDC90B-201ENST00000260054 FAM74A4Q5TZK3 123 aa11.16□□□□□ -0.62
CCDC90B-201ENST00000260054 ATP5L2Q7Z4Y8 100 aa11.16□□□□□ -0.62
CCDC90B-201ENST00000260054 PRO1933Q9H354 126 aa11.16□□□□□ -0.62
CCDC90B-201ENST00000260054 HTN3P15516 51 aa11.14□□□□□ -0.63
CCDC90B-201ENST00000260054 LINC00315P59091 139 aa11.14□□□□□ -0.63
CCDC90B-201ENST00000260054 TMEM18Q96B42 140 aa11.14□□□□□ -0.63
CCDC90B-201ENST00000260054 A0A1B0GW15 77 aa11.14□□□□□ -0.63
CCDC90B-201ENST00000260054 FHL2Q14192 279 aa11.14□□□□□ -0.63
CCDC90B-201ENST00000260054 ZFP2Q6ZN57 461 aa11.14□□□□□ -0.63
CCDC90B-201ENST00000260054 TMEM191AQ9H0A3 160 aa11.14□□□□□ -0.63
CCDC90B-201ENST00000260054 DPH3P1Q9H4G8 78 aa11.14□□□□□ -0.63
CCDC90B-201ENST00000260054 RHODO00212 210 aa11.13□□□□□ -0.63
CCDC90B-201ENST00000260054 SMIM17P0DL12 118 aa11.13□□□□□ -0.63
CCDC90B-201ENST00000260054 Q6ZSN1 163 aa11.12□□□□□ -0.63
CCDC90B-201ENST00000260054 SMIM15Q7Z3B0 74 aa11.12□□□□□ -0.63
CCDC90B-201ENST00000260054 GATD1Q8NB37 220 aa11.12□□□□□ -0.63
CCDC90B-201ENST00000260054 DEFB131BA0A096LNP1 70 aa11.11□□□□□ -0.63
CCDC90B-201ENST00000260054 TRGV4A0A0C4DH28 118 aa11.11□□□□□ -0.63
CCDC90B-201ENST00000260054 F5H768 121 aa11.11□□□□□ -0.63
CCDC90B-201ENST00000260054 CIDEAO60543 219 aa11.11□□□□□ -0.63
CCDC90B-201ENST00000260054 MGPP08493 103 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms