RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 BAHCC1Q9P281 2608 aa5.7□□□□□ -1.5
GPNMB-201ENST00000258733 MIFP14174 115 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 ZNF491Q8N8L2 437 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 NKAPP1Q8N9T2 125 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 CEP192Q8TEP8 1941 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 IGKV1-27A0A075B6S5 117 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 I3L3M4 83 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 M0R3E3 92 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 COX7A2LO14548 114 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 PSPNO60542 156 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 IGLV3-1P01715 115 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 FOXL2NBQ6ZUU3 175 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 VMO1Q7Z5L0 202 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 TOMM6Q96B49 74 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 COX14Q96I36 57 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 LINC00846Q9NV44 126 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 LINC00313P59037 77 aa5.69□□□□□ -1.5
GPNMB-201ENST00000258733 DSCAMO60469 2012 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 A8MU10 97 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 LINC00271P0C7V0 271 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 HOXA4Q00056 320 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-201ENST00000258733 DCTN5Q9BTE1 182 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 UNC80Q8N2C7 3258 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 ZNF407Q9C0G0 2248 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 TRAV12-3A0A0B4J271 114 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 BUB1B-PAK6H3BSN5 160 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 PSPHP1O15172 72 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 LYZL1Q6UWQ5 148 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 CLEC19AQ6UXS0 136 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 ZNF826PQ6ZT77 177 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 PHLDA3Q9Y5J5 127 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 ZFHX3Q15911 3703 aa5.68□□□□□ -1.5
GPNMB-201ENST00000258733 A6NN06 94 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 M0R1W7 72 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 TRBV12-3P01733 135 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 BAALC-AS2P0C853 105 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 SYCNQ0VAF6 134 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 DAZAP2Q15038 168 aaPredicted RBP5.67□□□□□ -1.5
GPNMB-201ENST00000258733 Q6ZRP5 223 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 HS3ST6Q96QI5 342 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 CCL13Q99616 98 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 SVILO95425 2214 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 PRNTQ86SH4 94 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 Q86TA4 180 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 IMMP1LQ96LU5 166 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 ARFGEF3Q5TH69 2177 aa5.67□□□□□ -1.5
GPNMB-201ENST00000258733 IGLV2-18A0A075B6J9 118 aa5.66□□□□□ -1.5
GPNMB-201ENST00000258733 IGHV1OR21-1A0A087WYE8 117 aa5.66□□□□□ -1.5
GPNMB-201ENST00000258733 C5orf67F2Z3F1 127 aa5.66□□□□□ -1.5
GPNMB-201ENST00000258733 IGHV4-34P06331 123 aa5.66□□□□□ -1.5
GPNMB-201ENST00000258733 ATP5EP2Q5VTU8 51 aa5.66□□□□□ -1.5
GPNMB-201ENST00000258733 GPHB5Q86YW7 130 aa5.66□□□□□ -1.5
GPNMB-201ENST00000258733 ITLN2Q8WWU7 325 aaPredicted RBP5.66□□□□□ -1.5
GPNMB-201ENST00000258733 CACNA1IQ9P0X4 2223 aa5.66□□□□□ -1.5
GPNMB-201ENST00000258733 DYNLRB2Q8TF09 96 aa5.66□□□□□ -1.5
GPNMB-201ENST00000258733 FSTL3O95633 263 aa5.65□□□□□ -1.5
GPNMB-201ENST00000258733 RNASE4P34096 147 aaKnown RBP5.65□□□□□ -1.5
GPNMB-201ENST00000258733 TSPEAR-AS2P59090 65 aa5.65□□□□□ -1.5
GPNMB-201ENST00000258733 TFF2Q03403 129 aa5.65□□□□□ -1.5
GPNMB-201ENST00000258733 Q0VFX4 171 aa5.65□□□□□ -1.5
GPNMB-201ENST00000258733 ATP11AUNQ6ZP68 121 aa5.65□□□□□ -1.5
GPNMB-201ENST00000258733 LINC00269Q8N2A0 174 aa5.65□□□□□ -1.5
GPNMB-201ENST00000258733 LINC00337Q8N6G1 96 aa5.65□□□□□ -1.5
GPNMB-201ENST00000258733 SPTSSBQ8NFR3 76 aa5.65□□□□□ -1.5
GPNMB-201ENST00000258733 GAS8-AS1O95177 125 aa5.65□□□□□ -1.5
GPNMB-201ENST00000258733 MED14OSP0DP75 135 aa5.65□□□□□ -1.5
GPNMB-201ENST00000258733 UBE2AP49459 152 aa5.65□□□□□ -1.5
GPNMB-201ENST00000258733 AMELXQ99217 191 aa5.65□□□□□ -1.5
GPNMB-201ENST00000258733 TRBV6-6A0A0A6YYG2 114 aa5.65□□□□□ -1.51
GPNMB-201ENST00000258733 Q8N6K4 173 aa5.65□□□□□ -1.51
GPNMB-201ENST00000258733 UBALD1Q8TB05 177 aa5.65□□□□□ -1.51
GPNMB-201ENST00000258733 C10orf142B7Z368 130 aa5.64□□□□□ -1.51
GPNMB-201ENST00000258733 RNF185Q96GF1 192 aa5.64□□□□□ -1.51
GPNMB-201ENST00000258733 SCGB3A1Q96QR1 104 aa5.64□□□□□ -1.51
GPNMB-201ENST00000258733 C22orf24Q9Y442 160 aa5.64□□□□□ -1.51
GPNMB-201ENST00000258733 NCOR1O75376 2440 aa5.64□□□□□ -1.51
GPNMB-201ENST00000258733 CADP27708 2225 aa5.64□□□□□ -1.51
GPNMB-201ENST00000258733 TRAV22A0A0B4J277 110 aa5.64□□□□□ -1.51
GPNMB-201ENST00000258733 C17orf98A8MV24 154 aa5.64□□□□□ -1.51
GPNMB-201ENST00000258733 C16orf90A8MZG2 172 aa5.64□□□□□ -1.51
GPNMB-201ENST00000258733 MP68P56378 58 aa5.64□□□□□ -1.51
GPNMB-201ENST00000258733 LINC01554Q52M75 96 aa5.64□□□□□ -1.51
GPNMB-201ENST00000258733 IGKV1-8A0A0C4DH67 115 aa5.63□□□□□ -1.51
GPNMB-201ENST00000258733 IGKV1-16P04430 117 aa5.63□□□□□ -1.51
GPNMB-201ENST00000258733 WFDC9Q8NEX5 89 aa5.63□□□□□ -1.51
GPNMB-201ENST00000258733 ESM1Q9NQ30 184 aa5.63□□□□□ -1.51
GPNMB-201ENST00000258733 CNTRLQ7Z7A1 2325 aa5.63□□□□□ -1.51
GPNMB-201ENST00000258733 IGKV1OR2-108A0A075B7D4 117 aa5.63□□□□□ -1.51
GPNMB-201ENST00000258733 COX7A2P2O60397 106 aa5.63□□□□□ -1.51
GPNMB-201ENST00000258733 C15orf32Q32M92 178 aa5.63□□□□□ -1.51
GPNMB-201ENST00000258733 KLF14Q8TD94 323 aaPredicted RBP5.63□□□□□ -1.51
GPNMB-201ENST00000258733 CCL26Q9Y258 94 aa5.63□□□□□ -1.51
GPNMB-201ENST00000258733 TRBV10-3A0A0K0K1G6 114 aa5.62□□□□□ -1.51
GPNMB-201ENST00000258733 NTN3O00634 580 aaPredicted RBP5.62□□□□□ -1.51
GPNMB-201ENST00000258733 LHBP01229 141 aa5.62□□□□□ -1.51
GPNMB-201ENST00000258733 CD28P10747 220 aa5.62□□□□□ -1.51
GPNMB-201ENST00000258733 PLCE1Q9P212 2302 aa5.62□□□□□ -1.51
GPNMB-201ENST00000258733 C11orf86A6NJI1 115 aa5.62□□□□□ -1.51
GPNMB-201ENST00000258733 KLLNB2CW77 178 aa5.62□□□□□ -1.51
GPNMB-201ENST00000258733 BRWD1-AS2P59051 145 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms