RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 SS18L2Q9UHA2 77 aa11.02□□□□□ -0.64
TRAFD1-201ENST00000257604 TRBV6-1A0A0K0K1D8 114 aa11.02□□□□□ -0.65
TRAFD1-201ENST00000257604 F5H697 171 aa11.02□□□□□ -0.65
TRAFD1-201ENST00000257604 SHISA2Q6UWI4 295 aa11.02□□□□□ -0.65
TRAFD1-201ENST00000257604 Q6YL49 198 aa11.02□□□□□ -0.65
TRAFD1-201ENST00000257604 NEGR1Q7Z3B1 354 aa11.02□□□□□ -0.65
TRAFD1-201ENST00000257604 GATD1Q8NB37 220 aa11.02□□□□□ -0.65
TRAFD1-201ENST00000257604 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.65
TRAFD1-201ENST00000257604 MAP1LC3AQ9H492 121 aa11.02□□□□□ -0.65
TRAFD1-201ENST00000257604 JPT2Q9H910 190 aa11.02□□□□□ -0.65
TRAFD1-201ENST00000257604 ZNF702PQ9H963 129 aa11.02□□□□□ -0.65
TRAFD1-201ENST00000257604 CD7P09564 240 aa11.01□□□□□ -0.65
TRAFD1-201ENST00000257604 ETDBQ3ZM63 59 aa11.01□□□□□ -0.65
TRAFD1-201ENST00000257604 MAPKAPK5-AS1Q8N8E1 139 aa11.01□□□□□ -0.65
TRAFD1-201ENST00000257604 KLHL30-AS1Q8NEE0 82 aa11.01□□□□□ -0.65
TRAFD1-201ENST00000257604 LINC00477Q96M19 166 aa11.01□□□□□ -0.65
TRAFD1-201ENST00000257604 NBEAL2Q6ZNJ1 2754 aa11.01□□□□□ -0.65
TRAFD1-201ENST00000257604 TCTEX1D4Q5JR98 221 aa11.01□□□□□ -0.65
TRAFD1-201ENST00000257604 ZNF575Q86XF7 245 aa11.01□□□□□ -0.65
TRAFD1-201ENST00000257604 RNF185Q96GF1 192 aa11.01□□□□□ -0.65
TRAFD1-201ENST00000257604 ATRQ13535 2644 aa11.01□□□□□ -0.65
TRAFD1-201ENST00000257604 A0A087WWL8 130 aa11□□□□□ -0.65
TRAFD1-201ENST00000257604 KNCNA6PVL3 124 aa11□□□□□ -0.65
TRAFD1-201ENST00000257604 J3QLI3 93 aa11□□□□□ -0.65
TRAFD1-201ENST00000257604 TNFRSF6BO95407 300 aa11□□□□□ -0.65
TRAFD1-201ENST00000257604 IGLC6P0CF74 106 aa11□□□□□ -0.65
TRAFD1-201ENST00000257604 INSL3P51460 131 aa11□□□□□ -0.65
TRAFD1-201ENST00000257604 ODF1Q14990 250 aa11□□□□□ -0.65
TRAFD1-201ENST00000257604 HHLA3Q9XRX5 114 aa11□□□□□ -0.65
TRAFD1-201ENST00000257604 TRBV25-1A0A075B6N4 114 aa11□□□□□ -0.65
TRAFD1-201ENST00000257604 J3QKU1 62 aa11□□□□□ -0.65
TRAFD1-201ENST00000257604 EMP1P54849 157 aa11□□□□□ -0.65
TRAFD1-201ENST00000257604 TSSC4Q9Y5U2 329 aaPredicted RBP11□□□□□ -0.65
TRAFD1-201ENST00000257604 C9orf47Q6ZRZ4 202 aa11□□□□□ -0.65
TRAFD1-201ENST00000257604 MRPL35Q9NZE8 188 aaKnown RBP11□□□□□ -0.65
TRAFD1-201ENST00000257604 ID1P41134 155 aa10.99□□□□□ -0.65
TRAFD1-201ENST00000257604 ZFAND2AQ8N6M9 145 aa10.99□□□□□ -0.65
TRAFD1-201ENST00000257604 FAM159AQ6UWV7 190 aa10.99□□□□□ -0.65
TRAFD1-201ENST00000257604 IGHV3OR16-12A0A075B7B8 117 aa10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 TRAV21A0A0B4J279 112 aa10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 OVOL1O14753 267 aa10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 IGKCP01834 107 aa10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 CRIP2P52943 208 aaPredicted RBP10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 CFHR3Q02985 330 aa10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 ATP6V0BQ99437 205 aa10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 ASIPP42127 132 aa10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 LINC01559Q495D7 138 aa10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 H3BUA1 57 aa10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 SIVA1O15304 175 aa10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 SNRPD3P62318 126 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 OR5A1Q8NGJ0 315 aa10.98□□□□□ -0.65
TRAFD1-201ENST00000257604 DEFB131AP59861 70 aa10.97□□□□□ -0.65
TRAFD1-201ENST00000257604 PDZD2O15018 2839 aa10.97□□□□□ -0.65
TRAFD1-201ENST00000257604 IGHV3-73A0A0B4J1V6 119 aa10.97□□□□□ -0.65
TRAFD1-201ENST00000257604 RBAKDNA6NC62 111 aa10.97□□□□□ -0.65
TRAFD1-201ENST00000257604 APRG1Q8IVJ8 170 aa10.97□□□□□ -0.65
TRAFD1-201ENST00000257604 RPL39LQ96EH5 51 aaKnown RBP10.97□□□□□ -0.65
TRAFD1-201ENST00000257604 HIST1H4GQ99525 98 aa10.97□□□□□ -0.65
TRAFD1-201ENST00000257604 OTOGQ6ZRI0 2925 aa10.96□□□□□ -0.65
TRAFD1-201ENST00000257604 DYNLRB2Q8TF09 96 aa10.96□□□□□ -0.65
TRAFD1-201ENST00000257604 SIGMAR1Q99720 223 aa10.96□□□□□ -0.65
TRAFD1-201ENST00000257604 LGALS1P09382 135 aaKnown RBP10.96□□□□□ -0.66
TRAFD1-201ENST00000257604 SMIM17P0DL12 118 aa10.96□□□□□ -0.66
TRAFD1-201ENST00000257604 CYSLTR1Q9Y271 337 aa10.96□□□□□ -0.66
TRAFD1-201ENST00000257604 SOCS3O14543 225 aa10.96□□□□□ -0.66
TRAFD1-201ENST00000257604 PLA2G2AP14555 144 aa10.95□□□□□ -0.66
TRAFD1-201ENST00000257604 KRTAP1-3Q8IUG1 177 aa10.95□□□□□ -0.66
TRAFD1-201ENST00000257604 DCANP1Q8TF63 244 aa10.95□□□□□ -0.66
TRAFD1-201ENST00000257604 DLX4Q92988 240 aaPredicted RBP10.94□□□□□ -0.66
TRAFD1-201ENST00000257604 DNAJC9-AS1A6NH13 148 aa10.94□□□□□ -0.66
TRAFD1-201ENST00000257604 DPM2O94777 84 aa10.94□□□□□ -0.66
TRAFD1-201ENST00000257604 CEND1Q8N111 149 aa10.94□□□□□ -0.66
TRAFD1-201ENST00000257604 ZNF479Q96JC4 524 aa10.93□□□□□ -0.66
TRAFD1-201ENST00000257604 MDFICQ9P1T7 246 aa10.93□□□□□ -0.66
TRAFD1-201ENST00000257604 MUC4Q99102 2169 aa10.93□□□□□ -0.66
TRAFD1-201ENST00000257604 PHLDA1Q8WV24 401 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-201ENST00000257604 ESM1Q9NQ30 184 aa10.93□□□□□ -0.66
TRAFD1-201ENST00000257604 TMEM61Q8N0U2 210 aa10.93□□□□□ -0.66
TRAFD1-201ENST00000257604 ELANEP08246 267 aa10.92□□□□□ -0.66
TRAFD1-201ENST00000257604 Q6ZSV7 163 aa10.92□□□□□ -0.66
TRAFD1-201ENST00000257604 GEMIN7Q9H840 131 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-201ENST00000257604 NXT2Q9NPJ8 142 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-201ENST00000257604 UBE2E2Q96LR5 201 aa10.92□□□□□ -0.66
TRAFD1-201ENST00000257604 IGLL5B9A064 214 aa10.91□□□□□ -0.66
TRAFD1-201ENST00000257604 NSUN5P1Q3KNT7 163 aa10.91□□□□□ -0.66
TRAFD1-201ENST00000257604 ZNF418Q8TF45 676 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-201ENST00000257604 KLK9Q2XQG4 91 aa10.91□□□□□ -0.66
TRAFD1-201ENST00000257604 MYOZ3Q8TDC0 251 aa10.91□□□□□ -0.66
TRAFD1-201ENST00000257604 PTH2Q96A98 100 aa10.91□□□□□ -0.66
TRAFD1-201ENST00000257604 ZMAT4Q9H898 229 aa10.91□□□□□ -0.66
TRAFD1-201ENST00000257604 LOC107984156A0A0G2JMH3 177 aa10.91□□□□□ -0.66
TRAFD1-201ENST00000257604 HERV-K104P63124 156 aa10.91□□□□□ -0.66
TRAFD1-201ENST00000257604 ARL17AQ8IVW1 177 aa10.91□□□□□ -0.66
TRAFD1-201ENST00000257604 MRPL53Q96EL3 112 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-201ENST00000257604 ZNF256Q9Y2P7 627 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-201ENST00000257604 CD28P10747 220 aa10.9□□□□□ -0.66
TRAFD1-201ENST00000257604 C12orf74Q32Q52 190 aa10.9□□□□□ -0.66
TRAFD1-201ENST00000257604 KMT2BQ9UMN6 2715 aaPredicted RBP10.9□□□□□ -0.67
TRAFD1-201ENST00000257604 A0A1B0GWB2 263 aa10.89□□□□□ -0.67
TRAFD1-201ENST00000257604 LINC01619G3V211 115 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms