RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 COX7A1P24310 79 aa5.15□□□□□ -1.58
PDGFRA-201ENST00000257290 FHL1Q13642 323 aa5.15□□□□□ -1.58
PDGFRA-201ENST00000257290 C20orf204Q6ZNR8 217 aa5.15□□□□□ -1.58
PDGFRA-201ENST00000257290 KIF26BQ2KJY2 2108 aa5.15□□□□□ -1.59
PDGFRA-201ENST00000257290 IGKV1-6A0A0C4DH72 117 aa5.15□□□□□ -1.59
PDGFRA-201ENST00000257290 IGKV3OR2-268A0A0C4DH90 116 aa5.15□□□□□ -1.59
PDGFRA-201ENST00000257290 ODF3L1Q8IXM7 274 aa5.15□□□□□ -1.59
PDGFRA-201ENST00000257290 IGKV1-27A0A075B6S5 117 aa5.15□□□□□ -1.59
PDGFRA-201ENST00000257290 GAFA1Q96PS6 74 aa5.15□□□□□ -1.59
PDGFRA-201ENST00000257290 CCL13Q99616 98 aa5.15□□□□□ -1.59
PDGFRA-201ENST00000257290 K7ENP7 123 aa5.14□□□□□ -1.59
PDGFRA-201ENST00000257290 RNASE4P34096 147 aaKnown RBP5.14□□□□□ -1.59
PDGFRA-201ENST00000257290 SCXQ7RTU7 201 aa5.14□□□□□ -1.59
PDGFRA-201ENST00000257290 OBSL1O75147 1896 aa5.14□□□□□ -1.59
PDGFRA-201ENST00000257290 A0A0J9YXY3 114 aa5.14□□□□□ -1.59
PDGFRA-201ENST00000257290 RALGAPA1Q6GYQ0 2036 aa5.14□□□□□ -1.59
PDGFRA-201ENST00000257290 FHL2Q14192 279 aa5.14□□□□□ -1.59
PDGFRA-201ENST00000257290 MED12Q93074 2177 aa5.14□□□□□ -1.59
PDGFRA-201ENST00000257290 CLPSL1A2RUU4 121 aa5.14□□□□□ -1.59
PDGFRA-201ENST00000257290 TMEM254Q8TBM7 123 aa5.14□□□□□ -1.59
PDGFRA-201ENST00000257290 CELA1Q9UNI1 258 aa5.14□□□□□ -1.59
PDGFRA-201ENST00000257290 PLXNB3Q9ULL4 1909 aa5.14□□□□□ -1.59
PDGFRA-201ENST00000257290 TRBV10-3A0A0K0K1G6 114 aa5.13□□□□□ -1.59
PDGFRA-201ENST00000257290 U3KQK5 164 aa5.13□□□□□ -1.59
PDGFRA-201ENST00000257290 LINC00473A8K010 186 aa5.13□□□□□ -1.59
PDGFRA-201ENST00000257290 POM121L12Q8N7R1 296 aa5.13□□□□□ -1.59
PDGFRA-201ENST00000257290 Q9H8V8 135 aa5.13□□□□□ -1.59
PDGFRA-201ENST00000257290 COX6B1P14854 86 aa5.13□□□□□ -1.59
PDGFRA-201ENST00000257290 PRM2P04554 102 aa5.13□□□□□ -1.59
PDGFRA-201ENST00000257290 MED12LQ86YW9 2145 aa5.13□□□□□ -1.59
PDGFRA-201ENST00000257290 POLEQ07864 2286 aa5.13□□□□□ -1.59
PDGFRA-201ENST00000257290 FAM19A1Q7Z5A9 133 aa5.13□□□□□ -1.59
PDGFRA-201ENST00000257290 DEFB104AQ8WTQ1 72 aa5.13□□□□□ -1.59
PDGFRA-201ENST00000257290 TRBV6-1A0A0K0K1D8 114 aa5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 DCANP1Q8TF63 244 aa5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 LINC00474Q9P2X8 69 aa5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 A0A087WWL8 130 aa5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 SAA2P0DJI9 122 aaPredicted RBP5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 RNASE6Q93091 150 aaKnown RBP5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 KIAA1549LQ6ZVL6 1849 aa5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 RUSC1-AS1Q66K80 236 aa5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 ATP11AUNQ6ZP68 121 aa5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 MUC22E2RYF6 1773 aaPredicted RBP5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 HEATR5BQ9P2D3 2071 aa5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 BSPH1Q075Z2 132 aa5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 IGHV1-18A0A0C4DH31 117 aa5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 HCG22E2RYF7 251 aa5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 OPRPNQ99935 248 aaPredicted RBP5.12□□□□□ -1.59
PDGFRA-201ENST00000257290 CCL24O00175 119 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 COL8A2P25067 703 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 C11orf53Q8IXP5 236 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 PRSS33Q8NF86 280 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 SND1-IT1Q9HBX3 110 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 IGKV3-7A0A075B6H7 116 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 NCR3O14931 201 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 INSP01308 110 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 KNL1Q8NG31 2342 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 THADAQ6YHU6 1953 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 A0A0J9YXV3 536 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 BPY2O14599 106 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 SP5Q6BEB4 398 aaPredicted RBP5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 IGFL3Q6UXB1 125 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 PROK2Q9HC23 129 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 TMEM14BQ9NUH8 114 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 EIF4EBP1Q13541 118 aaPredicted RBP5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 MLANAQ16655 118 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 LINC01560Q8TB33 94 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 C2orf16Q68DN1 1984 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 ASCC3Q8N3C0 2202 aaKnown RBP5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 C15orf32Q32M92 178 aa5.11□□□□□ -1.59
PDGFRA-201ENST00000257290 ZNRF1Q8ND25 227 aa5.1□□□□□ -1.59
PDGFRA-201ENST00000257290 ZNF134P52741 427 aa5.1□□□□□ -1.59
PDGFRA-201ENST00000257290 RETNLBQ9BQ08 111 aa5.1□□□□□ -1.59
PDGFRA-201ENST00000257290 ZGRF1Q86YA3 2104 aa5.1□□□□□ -1.59
PDGFRA-201ENST00000257290 IGHV1-69P01742 117 aa5.1□□□□□ -1.59
PDGFRA-201ENST00000257290 HILS1P60008 231 aa5.1□□□□□ -1.59
PDGFRA-201ENST00000257290 IGHV3-30-3P0DP02 117 aa5.1□□□□□ -1.59
PDGFRA-201ENST00000257290 COX7B2Q8TF08 81 aa5.1□□□□□ -1.59
PDGFRA-201ENST00000257290 LRRK1Q38SD2 2015 aa5.1□□□□□ -1.59
PDGFRA-201ENST00000257290 IGHV3-72A0A0B4J1Y9 119 aa5.09□□□□□ -1.59
PDGFRA-201ENST00000257290 KIAA1549Q9HCM3 1950 aa5.09□□□□□ -1.59
PDGFRA-201ENST00000257290 C1orf158Q8N1D5 194 aa5.09□□□□□ -1.59
PDGFRA-201ENST00000257290 FAM167A-AS1Q96KT0 104 aa5.09□□□□□ -1.59
PDGFRA-201ENST00000257290 CCL19Q99731 98 aa5.09□□□□□ -1.59
PDGFRA-201ENST00000257290 ALPK2Q86TB3 2170 aa5.09□□□□□ -1.59
PDGFRA-201ENST00000257290 C8orf87E5RJ46 101 aa5.09□□□□□ -1.59
PDGFRA-201ENST00000257290 PRR4Q16378 134 aa5.09□□□□□ -1.59
PDGFRA-201ENST00000257290 TMEM167AQ8TBQ9 72 aa5.09□□□□□ -1.59
PDGFRA-201ENST00000257290 HCFC1P51610 2035 aa5.09□□□□□ -1.6
PDGFRA-201ENST00000257290 MSRB1Q9NZV6 116 aa5.09□□□□□ -1.6
PDGFRA-201ENST00000257290 ADORA2A-AS1P86434 159 aa5.08□□□□□ -1.6
PDGFRA-201ENST00000257290 DEFB121Q5J5C9 76 aa5.08□□□□□ -1.6
PDGFRA-201ENST00000257290 C11orf45Q8TAV5 145 aa5.08□□□□□ -1.6
PDGFRA-201ENST00000257290 NOTCH4Q99466 2003 aa5.08□□□□□ -1.6
PDGFRA-201ENST00000257290 Q6ZSR3 168 aa5.08□□□□□ -1.6
PDGFRA-201ENST00000257290 DENND4CQ5VZ89 1909 aa5.08□□□□□ -1.6
PDGFRA-201ENST00000257290 KIF26AQ9ULI4 1882 aaPredicted RBP5.08□□□□□ -1.6
PDGFRA-201ENST00000257290 WFDC10AQ9H1F0 79 aa5.08□□□□□ -1.6
PDGFRA-201ENST00000257290 SPAG11BQ08648 103 aa5.08□□□□□ -1.6
PDGFRA-201ENST00000257290 IGHV1-3A0A0C4DH29 117 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms