RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 IGLV1-51P01701 117 aa10.12□□□□□ -0.79
PRPF38A-201ENST00000257181 Q8N976 141 aa10.12□□□□□ -0.79
PRPF38A-201ENST00000257181 TTC28Q96AY4 2481 aa10.12□□□□□ -0.79
PRPF38A-201ENST00000257181 IGLV2-14P01704 120 aa10.12□□□□□ -0.79
PRPF38A-201ENST00000257181 TIMM17AQ99595 171 aa10.12□□□□□ -0.79
PRPF38A-201ENST00000257181 ICE1Q9Y2F5 2266 aa10.11□□□□□ -0.79
PRPF38A-201ENST00000257181 RNF151Q2KHN1 245 aa10.11□□□□□ -0.79
PRPF38A-201ENST00000257181 ZNF664Q8N3J9 261 aa10.11□□□□□ -0.79
PRPF38A-201ENST00000257181 TRBV12-3P01733 135 aa10.11□□□□□ -0.79
PRPF38A-201ENST00000257181 EIF4EBP1Q13541 118 aaPredicted RBP10.11□□□□□ -0.79
PRPF38A-201ENST00000257181 IGHV3-64A0A075B6Q5 118 aa10.11□□□□□ -0.79
PRPF38A-201ENST00000257181 ZNF726P1Q15940 193 aa10.11□□□□□ -0.79
PRPF38A-201ENST00000257181 IGHV4-28A0A0C4DH34 117 aa10.1□□□□□ -0.79
PRPF38A-201ENST00000257181 ZNF706Q9Y5V0 76 aaPredicted RBP10.1□□□□□ -0.79
PRPF38A-201ENST00000257181 RS1O15537 224 aa10.1□□□□□ -0.79
PRPF38A-201ENST00000257181 SNRNP200O75643 2136 aaKnown RBP10.1□□□□□ -0.79
PRPF38A-201ENST00000257181 C17orf77Q96MU5 243 aa10.1□□□□□ -0.79
PRPF38A-201ENST00000257181 ZFAND3Q9H8U3 227 aa10.1□□□□□ -0.79
PRPF38A-201ENST00000257181 TRAV26-1A0A087WT03 109 aa10.1□□□□□ -0.79
PRPF38A-201ENST00000257181 RBMY1FQ15415 496 aaKnown RBP10.1□□□□□ -0.79
PRPF38A-201ENST00000257181 MALRD1Q5VYJ5 2156 aa10.1□□□□□ -0.79
PRPF38A-201ENST00000257181 COX7B2Q8TF08 81 aa10.1□□□□□ -0.79
PRPF38A-201ENST00000257181 KMT2EQ8IZD2 1858 aa10.1□□□□□ -0.79
PRPF38A-201ENST00000257181 SMKR1H3BMG3 65 aa10.09□□□□□ -0.79
PRPF38A-201ENST00000257181 SPATA3Q8NHX4 192 aa10.09□□□□□ -0.79
PRPF38A-201ENST00000257181 ZC2HC1BQ5TFG8 222 aa10.09□□□□□ -0.79
PRPF38A-201ENST00000257181 FAM167A-AS1Q96KT0 104 aa10.09□□□□□ -0.79
PRPF38A-201ENST00000257181 CDSNQ15517 529 aa10.09□□□□□ -0.79
PRPF38A-201ENST00000257181 FGF6P10767 208 aa10.09□□□□□ -0.79
PRPF38A-201ENST00000257181 LELP1Q5T871 98 aa10.08□□□□□ -0.8
PRPF38A-201ENST00000257181 UFSP1Q6NVU6 142 aa10.08□□□□□ -0.8
PRPF38A-201ENST00000257181 IGHV4-30-4P0DP06 118 aa10.08□□□□□ -0.8
PRPF38A-201ENST00000257181 PFN2P35080 140 aa10.08□□□□□ -0.8
PRPF38A-201ENST00000257181 SPAG11BQ08648 103 aa10.08□□□□□ -0.8
PRPF38A-201ENST00000257181 ZNF479Q96JC4 524 aa10.08□□□□□ -0.8
PRPF38A-201ENST00000257181 SCRT2Q9NQ03 307 aa10.07□□□□□ -0.8
PRPF38A-201ENST00000257181 PIEZO1Q92508 2521 aa10.07□□□□□ -0.8
PRPF38A-201ENST00000257181 MPDZO75970 2070 aa10.07□□□□□ -0.8
PRPF38A-201ENST00000257181 LY6G6CO95867 125 aa10.07□□□□□ -0.8
PRPF38A-201ENST00000257181 DOCK10Q96BY6 2186 aa10.07□□□□□ -0.8
PRPF38A-201ENST00000257181 DOCK7Q96N67 2140 aa10.07□□□□□ -0.8
PRPF38A-201ENST00000257181 KLK12Q9UKR0 248 aa10.06□□□□□ -0.8
PRPF38A-201ENST00000257181 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
PRPF38A-201ENST00000257181 ATOH7Q8N100 152 aa10.06□□□□□ -0.8
PRPF38A-201ENST00000257181 DDTP30046 118 aa10.06□□□□□ -0.8
PRPF38A-201ENST00000257181 DSCAMO60469 2012 aa10.06□□□□□ -0.8
PRPF38A-201ENST00000257181 A0A0U1RRA0 63 aa10.06□□□□□ -0.8
PRPF38A-201ENST00000257181 NPYP01303 97 aa10.05□□□□□ -0.8
PRPF38A-201ENST00000257181 C18orf32Q8TCD1 76 aa10.05□□□□□ -0.8
PRPF38A-201ENST00000257181 LINC00467Q9BRT7 94 aa10.05□□□□□ -0.8
PRPF38A-201ENST00000257181 H0YGX0 51 aa10.05□□□□□ -0.8
PRPF38A-201ENST00000257181 J3QQQ9 107 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 HIST1H2BKO60814 126 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 HIST1H2BJP06899 126 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 HIST1H2BOP23527 126 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 HIST1H2BBP33778 126 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 PROK1P58294 105 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 HIST1H2BDP58876 126 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 HIST1H2BCP62807 126 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 HIST2H2BEQ16778 126 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 HIST1H2BHQ93079 126 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 HIST1H2BNQ99877 126 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 HIST1H2BMQ99879 126 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 TRBV20-1A0A075B6N2 111 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 SPCS1Q9Y6A9 102 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 CACNA1DQ01668 2161 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 IGKV2-29A2NJV5 120 aaPredicted RBP10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 FSHBP01225 129 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 FHL3Q13643 280 aa10.04□□□□□ -0.8
PRPF38A-201ENST00000257181 IGKV1D-37A0A075B6S9 117 aa10.03□□□□□ -0.8
PRPF38A-201ENST00000257181 SOCS3O14543 225 aa10.03□□□□□ -0.8
PRPF38A-201ENST00000257181 LYPD6BQ8NI32 183 aa10.03□□□□□ -0.8
PRPF38A-201ENST00000257181 MED12Q93074 2177 aa10.03□□□□□ -0.8
PRPF38A-201ENST00000257181 ARHGAP21Q5T5U3 1957 aa10.03□□□□□ -0.8
PRPF38A-201ENST00000257181 REG3AQ06141 175 aa10.03□□□□□ -0.8
PRPF38A-201ENST00000257181 GAGE2BQ13066 116 aa10.03□□□□□ -0.8
PRPF38A-201ENST00000257181 SAMD5Q5TGI4 173 aa10.03□□□□□ -0.8
PRPF38A-201ENST00000257181 ALPK2Q86TB3 2170 aa10.02□□□□□ -0.8
PRPF38A-201ENST00000257181 TNRC6AQ8NDV7 1962 aaKnown RBP10.02□□□□□ -0.8
PRPF38A-201ENST00000257181 SRSF3P84103 164 aaKnown RBP10.02□□□□□ -0.81
PRPF38A-201ENST00000257181 TRAV26-2A0A0B4J265 109 aa10.02□□□□□ -0.81
PRPF38A-201ENST00000257181 GAGE12HA6NDE8 117 aa10.02□□□□□ -0.81
PRPF38A-201ENST00000257181 CLPSL2Q6UWE3 100 aa10.02□□□□□ -0.81
PRPF38A-201ENST00000257181 SMR3AQ99954 134 aa10.02□□□□□ -0.81
PRPF38A-201ENST00000257181 KPRPQ5T749 579 aaPredicted RBP10.02□□□□□ -0.81
PRPF38A-201ENST00000257181 DSCR8Q96T75 97 aa10.02□□□□□ -0.81
PRPF38A-201ENST00000257181 CYYR1Q96J86 154 aa10.01□□□□□ -0.81
PRPF38A-201ENST00000257181 AVPP01185 164 aa10.01□□□□□ -0.81
PRPF38A-201ENST00000257181 ARID1AO14497 2285 aa10.01□□□□□ -0.81
PRPF38A-201ENST00000257181 NDUFB1O75438 58 aa10.01□□□□□ -0.81
PRPF38A-201ENST00000257181 FRMD6-AS1P0C7T7 363 aa10.01□□□□□ -0.81
PRPF38A-201ENST00000257181 PTPRQQ9UMZ3 2332 aa10□□□□□ -0.81
PRPF38A-201ENST00000257181 FUSP35637 526 aaKnown RBP eCLIP10□□□□□ -0.81
PRPF38A-201ENST00000257181 ASPHD1Q5U4P2 390 aa10□□□□□ -0.81
PRPF38A-201ENST00000257181 CARD19Q96LW7 228 aa10□□□□□ -0.81
PRPF38A-201ENST00000257181 A4D1N5 150 aa10□□□□□ -0.81
PRPF38A-201ENST00000257181 PRAC2D3DTV9 90 aa10□□□□□ -0.81
PRPF38A-201ENST00000257181 PTH2Q96A98 100 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms