RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 SPATA12Q7Z6I5 190 aa8.85□□□□□ -0.99
NIP7-201ENST00000254940 IGHV3OR16-12A0A075B7B8 117 aa8.85□□□□□ -0.99
NIP7-201ENST00000254940 IGHV1-24A0A0C4DH33 117 aa8.85□□□□□ -0.99
NIP7-201ENST00000254940 H3BMM0 161 aa8.85□□□□□ -0.99
NIP7-201ENST00000254940 NPYP01303 97 aa8.85□□□□□ -0.99
NIP7-201ENST00000254940 C3orf79P0CE67 100 aa8.85□□□□□ -0.99
NIP7-201ENST00000254940 DEFB104AQ8WTQ1 72 aa8.85□□□□□ -0.99
NIP7-201ENST00000254940 RETNQ9HD89 108 aa8.85□□□□□ -0.99
NIP7-201ENST00000254940 H0Y8G0 127 aa8.84□□□□□ -0.99
NIP7-201ENST00000254940 RBMY1A1P0DJD3 496 aaKnown RBP8.84□□□□□ -0.99
NIP7-201ENST00000254940 RBMY1CP0DJD4 496 aa8.84□□□□□ -0.99
NIP7-201ENST00000254940 RBMY1FQ15415 496 aaKnown RBP8.84□□□□□ -0.99
NIP7-201ENST00000254940 CKS2P33552 79 aa8.84□□□□□ -0.99
NIP7-201ENST00000254940 SPANXN1Q5VSR9 72 aa8.84□□□□□ -0.99
NIP7-201ENST00000254940 Q8N976 141 aa8.84□□□□□ -0.99
NIP7-201ENST00000254940 JPT2Q9H910 190 aa8.84□□□□□ -0.99
NIP7-201ENST00000254940 COL7A1Q02388 2944 aa8.84□□□□□ -1
NIP7-201ENST00000254940 TRAV21A0A0B4J279 112 aa8.83□□□□□ -1
NIP7-201ENST00000254940 S100A4P26447 101 aaKnown RBP8.83□□□□□ -1
NIP7-201ENST00000254940 RPS20P60866 119 aaKnown RBP8.83□□□□□ -1
NIP7-201ENST00000254940 FOXI2Q6ZQN5 318 aa8.83□□□□□ -1
NIP7-201ENST00000254940 PRELID3AQ96N28 172 aa8.83□□□□□ -1
NIP7-201ENST00000254940 PRKDCP78527 4128 aaKnown RBP8.83□□□□□ -1
NIP7-201ENST00000254940 TGP01266 2768 aa8.83□□□□□ -1
NIP7-201ENST00000254940 TRAV2A0A0B4J234 112 aa8.83□□□□□ -1
NIP7-201ENST00000254940 KLLNB2CW77 178 aa8.83□□□□□ -1
NIP7-201ENST00000254940 RNASE3P12724 160 aaKnown RBP8.83□□□□□ -1
NIP7-201ENST00000254940 HLA-DRB4P13762 266 aa8.83□□□□□ -1
NIP7-201ENST00000254940 FAM110AQ9BQ89 295 aa8.83□□□□□ -1
NIP7-201ENST00000254940 CNFNQ9BYD5 112 aa8.83□□□□□ -1
NIP7-201ENST00000254940 HLA-DRB4X5D2U9 266 aa8.83□□□□□ -1
NIP7-201ENST00000254940 BATFQ16520 125 aa8.82□□□□□ -1
NIP7-201ENST00000254940 TRPT1Q86TN4 253 aaKnown RBP8.82□□□□□ -1
NIP7-201ENST00000254940 ORMDL3Q8N138 153 aa8.82□□□□□ -1
NIP7-201ENST00000254940 C14orf178Q8N769 122 aaPredicted RBP8.82□□□□□ -1
NIP7-201ENST00000254940 GATD1Q8NB37 220 aa8.82□□□□□ -1
NIP7-201ENST00000254940 PRSS3P2Q8NHM4 247 aa8.82□□□□□ -1
NIP7-201ENST00000254940 PMCHL2Q9BQD1 86 aa8.82□□□□□ -1
NIP7-201ENST00000254940 TMEM191AQ9H0A3 160 aa8.82□□□□□ -1
NIP7-201ENST00000254940 MDFICQ9P1T7 246 aa8.82□□□□□ -1
NIP7-201ENST00000254940 PAM16Q9Y3D7 125 aa8.82□□□□□ -1
NIP7-201ENST00000254940 LENEPQ9Y5L5 61 aa8.82□□□□□ -1
NIP7-201ENST00000254940 DEFB135Q30KP9 77 aa8.81□□□□□ -1
NIP7-201ENST00000254940 KPRPQ5T749 579 aaPredicted RBP8.81□□□□□ -1
NIP7-201ENST00000254940 AMTNQ6UX39 209 aa8.81□□□□□ -1
NIP7-201ENST00000254940 A0A096LNJ9 63 aa8.8□□□□□ -1
NIP7-201ENST00000254940 A0A1B0GW15 77 aa8.8□□□□□ -1
NIP7-201ENST00000254940 GIG44P09565 113 aaPredicted RBP8.8□□□□□ -1
NIP7-201ENST00000254940 PHLDA3Q9Y5J5 127 aa8.8□□□□□ -1
NIP7-201ENST00000254940 OR5AL1P0C617 328 aa8.8□□□□□ -1
NIP7-201ENST00000254940 FAM159AQ6UWV7 190 aa8.8□□□□□ -1
NIP7-201ENST00000254940 SBSPONQ8IVN8 264 aa8.8□□□□□ -1
NIP7-201ENST00000254940 AP5S1Q9NUS5 200 aa8.8□□□□□ -1
NIP7-201ENST00000254940 U3KQK5 164 aa8.8□□□□□ -1
NIP7-201ENST00000254940 DEFB4AO15263 64 aa8.79□□□□□ -1
NIP7-201ENST00000254940 SNAI2O43623 268 aa8.79□□□□□ -1
NIP7-201ENST00000254940 ASIPP42127 132 aa8.79□□□□□ -1
NIP7-201ENST00000254940 CDKN1BP46527 198 aa8.79□□□□□ -1
NIP7-201ENST00000254940 SAMD13Q5VXD3 122 aa8.79□□□□□ -1
NIP7-201ENST00000254940 CLUHP3Q96NS8 147 aa8.79□□□□□ -1
NIP7-201ENST00000254940 TP73-AS1Q9UF72 201 aa8.79□□□□□ -1
NIP7-201ENST00000254940 FBN3Q75N90 2809 aa8.79□□□□□ -1
NIP7-201ENST00000254940 A0A087WWL8 130 aa8.79□□□□□ -1
NIP7-201ENST00000254940 C7orf71A4D174 169 aa8.79□□□□□ -1
NIP7-201ENST00000254940 MIEN1Q9BRT3 115 aa8.79□□□□□ -1
NIP7-201ENST00000254940 CRXO43186 299 aaPredicted RBP8.78□□□□□ -1
NIP7-201ENST00000254940 LEPROTL1O95214 131 aa8.78□□□□□ -1
NIP7-201ENST00000254940 TNFRSF6BO95407 300 aa8.78□□□□□ -1
NIP7-201ENST00000254940 MRPL52Q86TS9 123 aaKnown RBP8.78□□□□□ -1
NIP7-201ENST00000254940 RNASE8Q8TDE3 154 aaKnown RBP8.78□□□□□ -1
NIP7-201ENST00000254940 DUSP14O95147 198 aaKnown RBP8.78□□□□□ -1
NIP7-201ENST00000254940 RBX1P62877 108 aa8.78□□□□□ -1
NIP7-201ENST00000254940 FA2HQ7L5A8 372 aa8.78□□□□□ -1
NIP7-201ENST00000254940 CSTL1Q9H114 145 aa8.78□□□□□ -1
NIP7-201ENST00000254940 CHCHD1Q96BP2 118 aaKnown RBP8.77□□□□□ -1.01
NIP7-201ENST00000254940 RPL39LQ96EH5 51 aaKnown RBP8.77□□□□□ -1.01
NIP7-201ENST00000254940 C20orf144Q9BQM9 153 aa8.77□□□□□ -1.01
NIP7-201ENST00000254940 MGPP08493 103 aa8.76□□□□□ -1.01
NIP7-201ENST00000254940 CMC4P56277 68 aaPredicted RBP8.76□□□□□ -1.01
NIP7-201ENST00000254940 EMP1P54849 157 aa8.76□□□□□ -1.01
NIP7-201ENST00000254940 TCTAP57738 103 aa8.76□□□□□ -1.01
NIP7-201ENST00000254940 TEX43Q6ZNM6 134 aa8.76□□□□□ -1.01
NIP7-201ENST00000254940 C18orf15Q96N68 181 aa8.76□□□□□ -1.01
NIP7-201ENST00000254940 SCRT2Q9NQ03 307 aa8.76□□□□□ -1.01
NIP7-201ENST00000254940 CIDEAO60543 219 aa8.75□□□□□ -1.01
NIP7-201ENST00000254940 FAM74A4Q5TZK3 123 aa8.75□□□□□ -1.01
NIP7-201ENST00000254940 NEGR1Q7Z3B1 354 aa8.75□□□□□ -1.01
NIP7-201ENST00000254940 NRACQ8N912 160 aa8.75□□□□□ -1.01
NIP7-201ENST00000254940 IGHV4-4A0A075B6R2 117 aa8.74□□□□□ -1.01
NIP7-201ENST00000254940 COL5A1-AS1Q5SY13 56 aa8.74□□□□□ -1.01
NIP7-201ENST00000254940 C1orf158Q8N1D5 194 aa8.74□□□□□ -1.01
NIP7-201ENST00000254940 LINC01587Q99440 93 aa8.74□□□□□ -1.01
NIP7-201ENST00000254940 STAB2Q8WWQ8 2551 aa8.74□□□□□ -1.01
NIP7-201ENST00000254940 IGHV3-16A0A0C4DH30 117 aa8.74□□□□□ -1.01
NIP7-201ENST00000254940 SYS1-DBNDD2H3BUS1 97 aa8.74□□□□□ -1.01
NIP7-201ENST00000254940 CCL25O15444 150 aa8.74□□□□□ -1.01
NIP7-201ENST00000254940 AZU1P20160 251 aa8.74□□□□□ -1.01
NIP7-201ENST00000254940 LEPP41159 167 aa8.74□□□□□ -1.01
NIP7-201ENST00000254940 TMEM70Q9BUB7 260 aa8.74□□□□□ -1.01
NIP7-201ENST00000254940 TRBV7-9A0A0J9YWB2 115 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms