RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 BUB3O43684 328 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 C14orf178Q8N769 122 aaPredicted RBP7.03□□□□□ -1.28
RPA1-201ENST00000254719 VGLL1Q99990 258 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 CHAC1Q9BUX1 264 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 TMEM89A2RUT3 159 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 NPYP01303 97 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 ODF1Q14990 250 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 IGFL4Q6B9Z1 124 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 RNF182Q8N6D2 247 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 USP9YO00507 2555 aaPredicted RBP7.03□□□□□ -1.28
RPA1-201ENST00000254719 ZNF688P0C7X2 276 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 Q6ZS46 218 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 STHQ8IWL8 128 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 CCDC140Q96MF4 163 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 AGPAT4-IT1Q9H0P7 198 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 TSSC4Q9Y5U2 329 aaPredicted RBP7.03□□□□□ -1.28
RPA1-201ENST00000254719 TENM1Q9UKZ4 2725 aa7.02□□□□□ -1.28
RPA1-201ENST00000254719 F8VRH5 84 aa7.02□□□□□ -1.29
RPA1-201ENST00000254719 WFDC2Q14508 124 aa7.02□□□□□ -1.29
RPA1-201ENST00000254719 C2orf91Q6ZV80 131 aa7.02□□□□□ -1.29
RPA1-201ENST00000254719 ITLN2Q8WWU7 325 aaPredicted RBP7.02□□□□□ -1.29
RPA1-201ENST00000254719 C11orf21Q9P2W6 132 aa7.02□□□□□ -1.29
RPA1-201ENST00000254719 C9orf118A6NHY6 69 aa7.02□□□□□ -1.29
RPA1-201ENST00000254719 TMEM262E9PQX1 116 aa7.02□□□□□ -1.29
RPA1-201ENST00000254719 PRORYQ9H606 182 aa7.02□□□□□ -1.29
RPA1-201ENST00000254719 ETDBQ3ZM63 59 aa7.02□□□□□ -1.29
RPA1-201ENST00000254719 C2orf66Q6UXQ4 117 aa7.02□□□□□ -1.29
RPA1-201ENST00000254719 CD28P10747 220 aa7.01□□□□□ -1.29
RPA1-201ENST00000254719 MEIG1Q5JSS6 88 aa7.01□□□□□ -1.29
RPA1-201ENST00000254719 PRAC2D3DTV9 90 aa7.01□□□□□ -1.29
RPA1-201ENST00000254719 K7EMT4 169 aa7.01□□□□□ -1.29
RPA1-201ENST00000254719 SPRY2O43597 315 aa7.01□□□□□ -1.29
RPA1-201ENST00000254719 HLA-DRB4P13762 266 aa7.01□□□□□ -1.29
RPA1-201ENST00000254719 GAGE13Q4V321 117 aa7.01□□□□□ -1.29
RPA1-201ENST00000254719 C9orf47Q6ZRZ4 202 aa7.01□□□□□ -1.29
RPA1-201ENST00000254719 HLA-DRB4X5D2U9 266 aa7.01□□□□□ -1.29
RPA1-201ENST00000254719 TRAV8-2A0A0B4J237 113 aa7.01□□□□□ -1.29
RPA1-201ENST00000254719 APOMO95445 188 aa7.01□□□□□ -1.29
RPA1-201ENST00000254719 EDN2P20800 178 aa7.01□□□□□ -1.29
RPA1-201ENST00000254719 TRAV12-3A0A0B4J271 114 aa7□□□□□ -1.29
RPA1-201ENST00000254719 PMVKQ15126 192 aa7□□□□□ -1.29
RPA1-201ENST00000254719 A8MWV9 139 aa7□□□□□ -1.29
RPA1-201ENST00000254719 INSP01308 110 aa7□□□□□ -1.29
RPA1-201ENST00000254719 ITPR3Q14573 2671 aa7□□□□□ -1.29
RPA1-201ENST00000254719 ANKRD17O75179 2603 aaKnown RBP7□□□□□ -1.29
RPA1-201ENST00000254719 IGHV3OR16-12A0A075B7B8 117 aa7□□□□□ -1.29
RPA1-201ENST00000254719 IGHV1OR15-1A0A075B7D0 117 aa7□□□□□ -1.29
RPA1-201ENST00000254719 TRAV26-1A0A087WT03 109 aa7□□□□□ -1.29
RPA1-201ENST00000254719 A0A087WX48 190 aa7□□□□□ -1.29
RPA1-201ENST00000254719 A0A096LNT2 108 aa7□□□□□ -1.29
RPA1-201ENST00000254719 C1QTNF4Q9BXJ3 329 aa7□□□□□ -1.29
RPA1-201ENST00000254719 SCRT2Q9NQ03 307 aa7□□□□□ -1.29
RPA1-201ENST00000254719 DKK2Q9UBU2 259 aa7□□□□□ -1.29
RPA1-201ENST00000254719 CD300EQ496F6 205 aaPredicted RBP7□□□□□ -1.29
RPA1-201ENST00000254719 ZNF876PQ49A33 203 aa7□□□□□ -1.29
RPA1-201ENST00000254719 C5orf56Q8N8D9 126 aa7□□□□□ -1.29
RPA1-201ENST00000254719 MORN3Q6PF18 240 aaPredicted RBP6.99□□□□□ -1.29
RPA1-201ENST00000254719 NEGR1Q7Z3B1 354 aa6.99□□□□□ -1.29
RPA1-201ENST00000254719 H3BMG7 143 aa6.99□□□□□ -1.29
RPA1-201ENST00000254719 RPL36AP83881 106 aaKnown RBP6.99□□□□□ -1.29
RPA1-201ENST00000254719 RHOHQ15669 191 aa6.99□□□□□ -1.29
RPA1-201ENST00000254719 DLX4Q92988 240 aaPredicted RBP6.99□□□□□ -1.29
RPA1-201ENST00000254719 RPL36ALQ969Q0 106 aaKnown RBP6.99□□□□□ -1.29
RPA1-201ENST00000254719 ERG28Q9UKR5 140 aa6.99□□□□□ -1.29
RPA1-201ENST00000254719 DNAH1Q9P2D7 4330 aa6.99□□□□□ -1.29
RPA1-201ENST00000254719 RNF223E7ERA6 249 aa6.99□□□□□ -1.29
RPA1-201ENST00000254719 G3V4G9 280 aa6.99□□□□□ -1.29
RPA1-201ENST00000254719 AVPP01185 164 aa6.99□□□□□ -1.29
RPA1-201ENST00000254719 FXYD2P54710 66 aa6.99□□□□□ -1.29
RPA1-201ENST00000254719 U3KQK5 164 aa6.99□□□□□ -1.29
RPA1-201ENST00000254719 CSPG4Q6UVK1 2322 aa6.99□□□□□ -1.29
RPA1-201ENST00000254719 A0A1B0GV72 72 aa6.98□□□□□ -1.29
RPA1-201ENST00000254719 HIGD1BQ9P298 99 aa6.98□□□□□ -1.29
RPA1-201ENST00000254719 H7C2G1 150 aa6.98□□□□□ -1.29
RPA1-201ENST00000254719 TRBV20-1A0A075B6N2 111 aa6.98□□□□□ -1.29
RPA1-201ENST00000254719 IGKV2D-26A0A0A0MRZ7 120 aa6.98□□□□□ -1.29
RPA1-201ENST00000254719 C10orf105Q8TEF2 133 aa6.98□□□□□ -1.29
RPA1-201ENST00000254719 RNF185Q96GF1 192 aa6.98□□□□□ -1.29
RPA1-201ENST00000254719 SPXQ9BT56 116 aa6.98□□□□□ -1.29
RPA1-201ENST00000254719 MYMXA0A1B0GTQ4 84 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 I3L3M4 83 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 SRD5A1P18405 259 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 PRR9Q5T870 116 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 IGF1P05019 195 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 ADAMTSL5Q6ZMM2 481 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 FOXI2Q6ZQN5 318 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 RNF152Q8N8N0 203 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 U3KQE9 123 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 IGHG2P01859 326 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 MSRB1Q9NZV6 116 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 TRGV2A0A075B6R0 118 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 TRAV12-1A0A0B4J245 112 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 LINC01546A6NGU7 62 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 LINC01619G3V211 115 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 K7EP34 96 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 GATA1P15976 413 aaPredicted RBP6.97□□□□□ -1.29
RPA1-201ENST00000254719 SYNJ2BPP57105 145 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 RASL10AQ92737 203 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 PTH2Q96A98 100 aa6.97□□□□□ -1.29
RPA1-201ENST00000254719 SIGMAR1Q99720 223 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms