RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 GAGE12HA6NDE8 117 aa6.64□□□□□ -1.35
PTCD3-201ENST00000254630 PLA2G2EQ9NZK7 142 aa6.64□□□□□ -1.35
PTCD3-201ENST00000254630 LYPD6Q86Y78 171 aa6.64□□□□□ -1.35
PTCD3-201ENST00000254630 ZNF843Q8N446 348 aa6.64□□□□□ -1.35
PTCD3-201ENST00000254630 LGALS9O00182 355 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 SPAG11BQ08648 103 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 DAND5Q8N907 189 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 H0YGX0 51 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 NPSP0C0P6 89 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 TP53TG3Q9ULZ0 132 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 TNRC6AQ8NDV7 1962 aaKnown RBP6.63□□□□□ -1.35
PTCD3-201ENST00000254630 KLK12Q9UKR0 248 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 CRYBA4P53673 196 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 MYO7BQ6PIF6 2116 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 INAFM1C9JVW0 142 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 ETDBQ3ZM63 59 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 B9D2Q9BPU9 175 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 DOCK8Q8NF50 2099 aa6.63□□□□□ -1.35
PTCD3-201ENST00000254630 RS1O15537 224 aa6.62□□□□□ -1.35
PTCD3-201ENST00000254630 ACYP1P07311 99 aa6.62□□□□□ -1.35
PTCD3-201ENST00000254630 NFE4Q86UQ8 179 aa6.62□□□□□ -1.35
PTCD3-201ENST00000254630 KNL1Q8NG31 2342 aa6.62□□□□□ -1.35
PTCD3-201ENST00000254630 LMO4P61968 165 aa6.62□□□□□ -1.35
PTCD3-201ENST00000254630 C14orf177Q52M58 125 aa6.62□□□□□ -1.35
PTCD3-201ENST00000254630 DIRC1Q969H9 104 aa6.62□□□□□ -1.35
PTCD3-201ENST00000254630 ODF3Q96PU9 254 aa6.62□□□□□ -1.35
PTCD3-201ENST00000254630 CCL25O15444 150 aa6.62□□□□□ -1.35
PTCD3-201ENST00000254630 TMEM61Q8N0U2 210 aa6.62□□□□□ -1.35
PTCD3-201ENST00000254630 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
PTCD3-201ENST00000254630 CHKB-CPT1BH3BT56 60 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 C4orf48Q5BLP8 95 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 PRO0255Q9UI72 69 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 NDUFB1O75438 58 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 HILS1P60008 231 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 PI4KAP42356 2102 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 IGKV1D-37A0A075B6S9 117 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 ARID1AO14497 2285 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 CABIN1Q9Y6J0 2220 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 LINC01548A6NM66 108 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 KNTC1P50748 2209 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 A0A0B4J2C4 111 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 A4D1N5 150 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 C20orf173Q96LM9 149 aa6.61□□□□□ -1.35
PTCD3-201ENST00000254630 E9PLD3 99 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 WFDC11Q8NEX6 87 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 C11orf1Q9H5F2 150 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 LINC00574Q9H8X3 128 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 CACNA1IQ9P0X4 2223 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 SVILO95425 2214 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 TRAV26-1A0A087WT03 109 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 IGHV1-58A0A0C4DH39 117 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 LYRM9A8MSI8 78 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 NUPR1O60356 82 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 Q6ZUT4 128 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 P0DMU3 169 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 FAM231AP0DMU4 169 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 FAM231CP0DMU5 169 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 C11orf71Q6IPW1 123 aa6.6□□□□□ -1.35
PTCD3-201ENST00000254630 HIGD2BQ4VC39 106 aa6.59□□□□□ -1.35
PTCD3-201ENST00000254630 ANKRD39Q53RE8 183 aa6.59□□□□□ -1.35
PTCD3-201ENST00000254630 KIR2DL5BA0A0G2JN68 375 aa6.59□□□□□ -1.35
PTCD3-201ENST00000254630 KIR2DL5BA0A0G2JPC4 375 aa6.59□□□□□ -1.35
PTCD3-201ENST00000254630 C19orf71A6NCJ1 209 aa6.59□□□□□ -1.35
PTCD3-201ENST00000254630 SNRNP200O75643 2136 aaKnown RBP6.59□□□□□ -1.35
PTCD3-201ENST00000254630 KIR2DL5AQ8N109 375 aa6.59□□□□□ -1.35
PTCD3-201ENST00000254630 IGF1P05019 195 aa6.59□□□□□ -1.35
PTCD3-201ENST00000254630 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
PTCD3-201ENST00000254630 LY6G6DO95868 133 aa6.59□□□□□ -1.35
PTCD3-201ENST00000254630 ZFAND2AQ8N6M9 145 aa6.59□□□□□ -1.35
PTCD3-201ENST00000254630 RNF183Q96D59 192 aa6.59□□□□□ -1.35
PTCD3-201ENST00000254630 DYSFO75923 2080 aa6.59□□□□□ -1.36
PTCD3-201ENST00000254630 SMIM9A6NGZ8 99 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 CRYGDP07320 174 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 PRO3102Q9H379 93 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 SPATA25Q9BR10 227 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 TRBV10-1A0A0K0K1A3 114 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 H7C423 109 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 FSTL3O95633 263 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 CRYGBP07316 175 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 COX7BP24311 80 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 NREPQ16612 68 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 DEFB114Q30KQ6 69 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 MIR7-3HGQ8N6C7 128 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 CLEC2BQ92478 149 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 REG3AQ06141 175 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 SEC16AO15027 2179 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 LINC00269Q8N2A0 174 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 HIGD1BQ9P298 99 aa6.58□□□□□ -1.36
PTCD3-201ENST00000254630 P0C879 139 aa6.57□□□□□ -1.36
PTCD3-201ENST00000254630 Q6ZTI0 123 aa6.57□□□□□ -1.36
PTCD3-201ENST00000254630 ALPK3Q96L96 1907 aa6.57□□□□□ -1.36
PTCD3-201ENST00000254630 KIAA2026Q5HYC2 2103 aa6.57□□□□□ -1.36
PTCD3-201ENST00000254630 LY6LH3BQJ8 138 aa6.57□□□□□ -1.36
PTCD3-201ENST00000254630 CEMP1Q6PRD7 247 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-201ENST00000254630 C1orf229Q6ZS94 237 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-201ENST00000254630 ZNF80P51504 273 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-201ENST00000254630 FAM110AQ9BQ89 295 aa6.57□□□□□ -1.36
PTCD3-201ENST00000254630 EML6Q6ZMW3 1958 aa6.57□□□□□ -1.36
PTCD3-201ENST00000254630 LINC01620Q4KN68 170 aa6.57□□□□□ -1.36
PTCD3-201ENST00000254630 FAM222AQ5U5X8 452 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms