RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 LGALS3P17931 250 aaKnown RBP9.09□□□□□ -0.95
USHBP1-201ENST00000252597 IGLV2-18A0A075B6J9 118 aa9.08□□□□□ -0.96
USHBP1-201ENST00000252597 A0A1B0GV72 72 aa9.08□□□□□ -0.96
USHBP1-201ENST00000252597 KNCNA6PVL3 124 aa9.08□□□□□ -0.96
USHBP1-201ENST00000252597 H3BUX3 64 aa9.08□□□□□ -0.96
USHBP1-201ENST00000252597 CFAP161Q6P656 301 aa9.08□□□□□ -0.96
USHBP1-201ENST00000252597 DLX4Q92988 240 aaPredicted RBP9.08□□□□□ -0.96
USHBP1-201ENST00000252597 HIST2H2BDQ6DRA6 164 aa9.08□□□□□ -0.96
USHBP1-201ENST00000252597 Q6ZS46 218 aa9.08□□□□□ -0.96
USHBP1-201ENST00000252597 NF1P21359 2839 aa9.08□□□□□ -0.96
USHBP1-201ENST00000252597 ADORA2A-AS1P86434 159 aa9.08□□□□□ -0.96
USHBP1-201ENST00000252597 PSMG4Q5JS54 123 aa9.08□□□□□ -0.96
USHBP1-201ENST00000252597 CENPVL3A0A0U1RRI6 287 aa9.07□□□□□ -0.96
USHBP1-201ENST00000252597 KLRB1Q12918 225 aa9.07□□□□□ -0.96
USHBP1-201ENST00000252597 MAPK1IP1LQ8NDC0 245 aa9.07□□□□□ -0.96
USHBP1-201ENST00000252597 PRM2P04554 102 aa9.07□□□□□ -0.96
USHBP1-201ENST00000252597 MINOS1Q5TGZ0 78 aa9.07□□□□□ -0.96
USHBP1-201ENST00000252597 ZMAT4Q9H898 229 aa9.07□□□□□ -0.96
USHBP1-201ENST00000252597 MINOS1-NBL1R4GNA1 71 aa9.07□□□□□ -0.96
USHBP1-201ENST00000252597 USP24Q9UPU5 2620 aa9.07□□□□□ -0.96
USHBP1-201ENST00000252597 FN1P02751 2386 aaKnown RBP9.07□□□□□ -0.96
USHBP1-201ENST00000252597 SDHAF1A6NFY7 115 aa9.06□□□□□ -0.96
USHBP1-201ENST00000252597 C9JAW5 83 aa9.06□□□□□ -0.96
USHBP1-201ENST00000252597 KHDC1LQ5JSQ8 128 aa9.06□□□□□ -0.96
USHBP1-201ENST00000252597 FBN2P35556 2912 aa9.06□□□□□ -0.96
USHBP1-201ENST00000252597 MT-ATP8P03928 68 aa9.06□□□□□ -0.96
USHBP1-201ENST00000252597 ATP6V0BQ99437 205 aa9.06□□□□□ -0.96
USHBP1-201ENST00000252597 SPXQ9BT56 116 aa9.06□□□□□ -0.96
USHBP1-201ENST00000252597 FASNP49327 2511 aaKnown RBP9.06□□□□□ -0.96
USHBP1-201ENST00000252597 SPINK13Q1W4C9 94 aa9.06□□□□□ -0.96
USHBP1-201ENST00000252597 C9orf139Q6ZV77 190 aa9.06□□□□□ -0.96
USHBP1-201ENST00000252597 TRBV7-1A0A0A6YYK4 115 aa9.05□□□□□ -0.96
USHBP1-201ENST00000252597 UBE2E1P51965 193 aa9.05□□□□□ -0.96
USHBP1-201ENST00000252597 NRGNQ92686 78 aa9.05□□□□□ -0.96
USHBP1-201ENST00000252597 MRAP2Q96G30 205 aa9.05□□□□□ -0.96
USHBP1-201ENST00000252597 DOPEY1Q5JWR5 2465 aa9.05□□□□□ -0.96
USHBP1-201ENST00000252597 TSPAN13O95857 204 aa9.05□□□□□ -0.96
USHBP1-201ENST00000252597 MORN3Q6PF18 240 aaPredicted RBP9.05□□□□□ -0.96
USHBP1-201ENST00000252597 TRPT1Q86TN4 253 aaKnown RBP9.05□□□□□ -0.96
USHBP1-201ENST00000252597 ZFAND2AQ8N6M9 145 aa9.05□□□□□ -0.96
USHBP1-201ENST00000252597 CNFNQ9BYD5 112 aa9.05□□□□□ -0.96
USHBP1-201ENST00000252597 TRBV7-3A0A075B6L6 115 aa9.05□□□□□ -0.96
USHBP1-201ENST00000252597 TRAV26-1A0A087WT03 109 aa9.05□□□□□ -0.96
USHBP1-201ENST00000252597 GEMIN7Q9H840 131 aaKnown RBP9.05□□□□□ -0.96
USHBP1-201ENST00000252597 IGHV4-38-2P0DP08 117 aa9.04□□□□□ -0.96
USHBP1-201ENST00000252597 CEMP1Q6PRD7 247 aaPredicted RBP9.04□□□□□ -0.96
USHBP1-201ENST00000252597 Q8N6K4 173 aa9.04□□□□□ -0.96
USHBP1-201ENST00000252597 NEXN-AS1Q8NBZ9 246 aa9.04□□□□□ -0.96
USHBP1-201ENST00000252597 SIRPDQ9H106 197 aa9.04□□□□□ -0.96
USHBP1-201ENST00000252597 FOXI1Q12951 378 aa9.04□□□□□ -0.96
USHBP1-201ENST00000252597 C9orf47Q6ZRZ4 202 aa9.04□□□□□ -0.96
USHBP1-201ENST00000252597 ZNF580Q9UK33 172 aa9.04□□□□□ -0.96
USHBP1-201ENST00000252597 SUMO4Q6EEV6 95 aa9.03□□□□□ -0.96
USHBP1-201ENST00000252597 C10orf99Q6UWK7 81 aa9.03□□□□□ -0.96
USHBP1-201ENST00000252597 TOMM6Q96B49 74 aa9.03□□□□□ -0.96
USHBP1-201ENST00000252597 MDFICQ9P1T7 246 aa9.03□□□□□ -0.96
USHBP1-201ENST00000252597 A8MWV9 139 aa9.03□□□□□ -0.96
USHBP1-201ENST00000252597 ZNF876PQ49A33 203 aa9.03□□□□□ -0.96
USHBP1-201ENST00000252597 NFE4Q86UQ8 179 aa9.03□□□□□ -0.96
USHBP1-201ENST00000252597 C5orf56Q8N8D9 126 aa9.03□□□□□ -0.96
USHBP1-201ENST00000252597 ZNF48Q96MX3 618 aaPredicted RBP9.03□□□□□ -0.96
USHBP1-201ENST00000252597 TCL1BO95988 128 aa9.03□□□□□ -0.96
USHBP1-201ENST00000252597 PRB1P04280 392 aa9.03□□□□□ -0.96
USHBP1-201ENST00000252597 PRRC2AP48634 2157 aaKnown RBP9.02□□□□□ -0.97
USHBP1-201ENST00000252597 IGHV3OR16-12A0A075B7B8 117 aa9.02□□□□□ -0.97
USHBP1-201ENST00000252597 RBAKDNA6NC62 111 aa9.02□□□□□ -0.97
USHBP1-201ENST00000252597 ZNF625Q96I27 306 aaPredicted RBP9.02□□□□□ -0.97
USHBP1-201ENST00000252597 MOB4Q9Y3A3 225 aa9.02□□□□□ -0.97
USHBP1-201ENST00000252597 P0DMU3 169 aa9.02□□□□□ -0.97
USHBP1-201ENST00000252597 FAM231AP0DMU4 169 aa9.02□□□□□ -0.97
USHBP1-201ENST00000252597 FAM231CP0DMU5 169 aa9.02□□□□□ -0.97
USHBP1-201ENST00000252597 TSPEAR-AS2P59090 65 aa9.02□□□□□ -0.97
USHBP1-201ENST00000252597 A0A0J9YXV3 536 aa9.02□□□□□ -0.97
USHBP1-201ENST00000252597 A4D1N5 150 aa9.02□□□□□ -0.97
USHBP1-201ENST00000252597 OVOL1O14753 267 aa9.02□□□□□ -0.97
USHBP1-201ENST00000252597 PMVKQ15126 192 aa9.02□□□□□ -0.97
USHBP1-201ENST00000252597 OOSP1A8MZH6 123 aa9.01□□□□□ -0.97
USHBP1-201ENST00000252597 RNASE3P12724 160 aaKnown RBP9.01□□□□□ -0.97
USHBP1-201ENST00000252597 DUX3Q96PT4 197 aa9.01□□□□□ -0.97
USHBP1-201ENST00000252597 TRBV20-1A0A075B6N2 111 aa9.01□□□□□ -0.97
USHBP1-201ENST00000252597 IGHV3-38A0A0C4DH36 116 aa9.01□□□□□ -0.97
USHBP1-201ENST00000252597 A8MZ25 164 aa9.01□□□□□ -0.97
USHBP1-201ENST00000252597 J3QQQ9 107 aa9.01□□□□□ -0.97
USHBP1-201ENST00000252597 AJUBAQ96IF1 538 aa9.01□□□□□ -0.97
USHBP1-201ENST00000252597 MUC4Q99102 2169 aa9□□□□□ -0.97
USHBP1-201ENST00000252597 TAL2Q16559 108 aa9□□□□□ -0.97
USHBP1-201ENST00000252597 DAND5Q8N907 189 aa9□□□□□ -0.97
USHBP1-201ENST00000252597 VCX2Q9H322 139 aa9□□□□□ -0.97
USHBP1-201ENST00000252597 TEX15Q9BXT5 2789 aa9□□□□□ -0.97
USHBP1-201ENST00000252597 CRIP2P52943 208 aaPredicted RBP9□□□□□ -0.97
USHBP1-201ENST00000252597 C1QTNF4Q9BXJ3 329 aa9□□□□□ -0.97
USHBP1-201ENST00000252597 HECTD1Q9ULT8 2610 aa9□□□□□ -0.97
USHBP1-201ENST00000252597 VCYO14598 125 aa9□□□□□ -0.97
USHBP1-201ENST00000252597 SMCPP49901 116 aaPredicted RBP9□□□□□ -0.97
USHBP1-201ENST00000252597 XGP55808 180 aa9□□□□□ -0.97
USHBP1-201ENST00000252597 ANKRD29Q8N6D5 301 aa9□□□□□ -0.97
USHBP1-201ENST00000252597 TRAV8-3A0A0A6YYJ7 113 aa8.99□□□□□ -0.97
USHBP1-201ENST00000252597 IGHV3-16A0A0C4DH30 117 aa8.99□□□□□ -0.97
USHBP1-201ENST00000252597 COX8CQ7Z4L0 72 aa8.99□□□□□ -0.97
USHBP1-201ENST00000252597 NDUFA11Q86Y39 141 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms