RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SPANXB1Q9NS25 103 aaPredicted RBP12.84□□□□□ -0.35
FOXA1-201ENST00000250448 WFDC2Q14508 124 aa12.84□□□□□ -0.35
FOXA1-201ENST00000250448 LCNL1Q6ZST4 164 aa12.84□□□□□ -0.35
FOXA1-201ENST00000250448 U3KQE9 123 aa12.84□□□□□ -0.35
FOXA1-201ENST00000250448 TRAV41A0A0B4J266 112 aa12.83□□□□□ -0.35
FOXA1-201ENST00000250448 CUBNO60494 3623 aa12.83□□□□□ -0.36
FOXA1-201ENST00000250448 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
FOXA1-201ENST00000250448 LINC01619G3V211 115 aa12.83□□□□□ -0.36
FOXA1-201ENST00000250448 ORMDL2Q53FV1 153 aa12.83□□□□□ -0.36
FOXA1-201ENST00000250448 OR11H1Q8NG94 326 aa12.83□□□□□ -0.36
FOXA1-201ENST00000250448 OR11H2Q8NH07 326 aa12.83□□□□□ -0.36
FOXA1-201ENST00000250448 TRBV7-1A0A0A6YYK4 115 aa12.83□□□□□ -0.36
FOXA1-201ENST00000250448 FSHBP01225 129 aa12.83□□□□□ -0.36
FOXA1-201ENST00000250448 RPL32P62910 135 aaKnown RBP12.83□□□□□ -0.36
FOXA1-201ENST00000250448 C16orf92Q96LL3 132 aa12.83□□□□□ -0.36
FOXA1-201ENST00000250448 RRN3P1Q2M238 152 aa12.82□□□□□ -0.36
FOXA1-201ENST00000250448 SCGB3A1Q96QR1 104 aa12.82□□□□□ -0.36
FOXA1-201ENST00000250448 KLK15Q9H2R5 256 aa12.82□□□□□ -0.36
FOXA1-201ENST00000250448 MYMXA0A1B0GTQ4 84 aa12.82□□□□□ -0.36
FOXA1-201ENST00000250448 TOMM6Q96B49 74 aa12.82□□□□□ -0.36
FOXA1-201ENST00000250448 H3BMG7 143 aa12.81□□□□□ -0.36
FOXA1-201ENST00000250448 SUMO2P61956 95 aaKnown RBP12.81□□□□□ -0.36
FOXA1-201ENST00000250448 C9orf139Q6ZV77 190 aa12.81□□□□□ -0.36
FOXA1-201ENST00000250448 A0A1B0GWB2 263 aa12.8□□□□□ -0.36
FOXA1-201ENST00000250448 HOXA3O43365 443 aaPredicted RBP12.8□□□□□ -0.36
FOXA1-201ENST00000250448 NEXN-AS1Q8NBZ9 246 aa12.8□□□□□ -0.36
FOXA1-201ENST00000250448 RASL10AQ92737 203 aa12.8□□□□□ -0.36
FOXA1-201ENST00000250448 C20orf173Q96LM9 149 aa12.8□□□□□ -0.36
FOXA1-201ENST00000250448 LENEPQ9Y5L5 61 aa12.8□□□□□ -0.36
FOXA1-201ENST00000250448 TSSC4Q9Y5U2 329 aaPredicted RBP12.8□□□□□ -0.36
FOXA1-201ENST00000250448 M0R381 172 aa12.8□□□□□ -0.36
FOXA1-201ENST00000250448 IGF1P05019 195 aa12.8□□□□□ -0.36
FOXA1-201ENST00000250448 J3QR89 54 aa12.79□□□□□ -0.36
FOXA1-201ENST00000250448 AMTNQ6UX39 209 aa12.79□□□□□ -0.36
FOXA1-201ENST00000250448 C20orf78Q9BR46 151 aa12.79□□□□□ -0.36
FOXA1-201ENST00000250448 IGHG2P01859 326 aa12.79□□□□□ -0.36
FOXA1-201ENST00000250448 ATP5G2Q06055 141 aa12.79□□□□□ -0.36
FOXA1-201ENST00000250448 TCTEX1D4Q5JR98 221 aa12.79□□□□□ -0.36
FOXA1-201ENST00000250448 GLMPQ8WWB7 406 aa12.79□□□□□ -0.36
FOXA1-201ENST00000250448 VCX2Q9H322 139 aa12.79□□□□□ -0.36
FOXA1-201ENST00000250448 C10orf99Q6UWK7 81 aa12.79□□□□□ -0.36
FOXA1-201ENST00000250448 RPL39LQ96EH5 51 aaKnown RBP12.79□□□□□ -0.36
FOXA1-201ENST00000250448 DPH3P1Q9H4G8 78 aa12.79□□□□□ -0.36
FOXA1-201ENST00000250448 SETD2Q9BYW2 2564 aaPredicted RBP12.78□□□□□ -0.36
FOXA1-201ENST00000250448 FLNBO75369 2602 aaKnown RBP12.78□□□□□ -0.36
FOXA1-201ENST00000250448 OTOGQ6ZRI0 2925 aa12.78□□□□□ -0.36
FOXA1-201ENST00000250448 SPRY2O43597 315 aa12.78□□□□□ -0.36
FOXA1-201ENST00000250448 CD300EQ496F6 205 aaPredicted RBP12.78□□□□□ -0.36
FOXA1-201ENST00000250448 C19orf54Q5BKX5 351 aa12.78□□□□□ -0.36
FOXA1-201ENST00000250448 SH2D6Q7Z4S9 175 aa12.78□□□□□ -0.36
FOXA1-201ENST00000250448 LGALS1P09382 135 aaKnown RBP12.78□□□□□ -0.36
FOXA1-201ENST00000250448 ETDBQ3ZM63 59 aa12.78□□□□□ -0.36
FOXA1-201ENST00000250448 GAGE13Q4V321 117 aa12.78□□□□□ -0.36
FOXA1-201ENST00000250448 ZFAND2AQ8N6M9 145 aa12.78□□□□□ -0.36
FOXA1-201ENST00000250448 GAGE12HA6NDE8 117 aa12.77□□□□□ -0.36
FOXA1-201ENST00000250448 IGHV3-11P01762 117 aa12.77□□□□□ -0.36
FOXA1-201ENST00000250448 BAALCQ8WXS3 180 aa12.77□□□□□ -0.36
FOXA1-201ENST00000250448 PRO0461Q9UI25 63 aa12.77□□□□□ -0.36
FOXA1-201ENST00000250448 CYSLTR1Q9Y271 337 aa12.77□□□□□ -0.36
FOXA1-201ENST00000250448 TRAV21A0A0B4J279 112 aa12.77□□□□□ -0.37
FOXA1-201ENST00000250448 S100A4P26447 101 aaKnown RBP12.77□□□□□ -0.37
FOXA1-201ENST00000250448 C2orf66Q6UXQ4 117 aa12.77□□□□□ -0.37
FOXA1-201ENST00000250448 Q6YL49 198 aa12.77□□□□□ -0.37
FOXA1-201ENST00000250448 C14orf178Q8N769 122 aaPredicted RBP12.77□□□□□ -0.37
FOXA1-201ENST00000250448 LINC00477Q96M19 166 aa12.77□□□□□ -0.37
FOXA1-201ENST00000250448 ASIPP42127 132 aa12.76□□□□□ -0.37
FOXA1-201ENST00000250448 MTURNQ8N3F0 131 aa12.76□□□□□ -0.37
FOXA1-201ENST00000250448 MGPP08493 103 aa12.76□□□□□ -0.37
FOXA1-201ENST00000250448 KRTAP1-1Q07627 177 aa12.76□□□□□ -0.37
FOXA1-201ENST00000250448 SPAG8Q99932 426 aaPredicted RBP12.76□□□□□ -0.37
FOXA1-201ENST00000250448 SMR3AQ99954 134 aa12.76□□□□□ -0.37
FOXA1-201ENST00000250448 PRADC1Q9BSG0 188 aa12.76□□□□□ -0.37
FOXA1-201ENST00000250448 TRBV12-3P01733 135 aa12.75□□□□□ -0.37
FOXA1-201ENST00000250448 MORN3Q6PF18 240 aaPredicted RBP12.75□□□□□ -0.37
FOXA1-201ENST00000250448 VPREB3Q9UKI3 123 aa12.75□□□□□ -0.37
FOXA1-201ENST00000250448 PHLDA3Q9Y5J5 127 aa12.75□□□□□ -0.37
FOXA1-201ENST00000250448 OR10J6PQ8NGY7 276 aa12.75□□□□□ -0.37
FOXA1-201ENST00000250448 GPHB5Q86YW7 130 aa12.75□□□□□ -0.37
FOXA1-201ENST00000250448 SPATA25Q9BR10 227 aa12.75□□□□□ -0.37
FOXA1-201ENST00000250448 PRSS29PA6NIE9 313 aa12.74□□□□□ -0.37
FOXA1-201ENST00000250448 B5MCH6 92 aa12.74□□□□□ -0.37
FOXA1-201ENST00000250448 OVOL1O14753 267 aa12.74□□□□□ -0.37
FOXA1-201ENST00000250448 ANXA2RQ3ZCQ2 193 aa12.74□□□□□ -0.37
FOXA1-201ENST00000250448 RNF183Q96D59 192 aa12.74□□□□□ -0.37
FOXA1-201ENST00000250448 FAM223BA6NKX1 122 aa12.74□□□□□ -0.37
FOXA1-201ENST00000250448 FAM223AQ8IWN6 122 aa12.74□□□□□ -0.37
FOXA1-201ENST00000250448 ZNF815PA8K554 130 aa12.73□□□□□ -0.37
FOXA1-201ENST00000250448 MED14OSP0DP75 135 aa12.73□□□□□ -0.37
FOXA1-201ENST00000250448 CRIP2P52943 208 aaPredicted RBP12.73□□□□□ -0.37
FOXA1-201ENST00000250448 ANK3Q12955 4377 aaKnown RBP12.73□□□□□ -0.37
FOXA1-201ENST00000250448 DEFB1P60022 68 aa12.73□□□□□ -0.37
FOXA1-201ENST00000250448 SOCS3O14543 225 aa12.72□□□□□ -0.37
FOXA1-201ENST00000250448 UNQ9165/PRO28630Q6UXU0 137 aa12.72□□□□□ -0.37
FOXA1-201ENST00000250448 PLEKHB2Q96CS7 222 aa12.71□□□□□ -0.37
FOXA1-201ENST00000250448 SCGB1D4Q6XE38 83 aa12.71□□□□□ -0.37
FOXA1-201ENST00000250448 MRPL16Q9NX20 251 aaKnown RBP12.71□□□□□ -0.37
FOXA1-201ENST00000250448 PPP1R17O96001 155 aa12.71□□□□□ -0.38
FOXA1-201ENST00000250448 RNASE4P34096 147 aaKnown RBP12.71□□□□□ -0.38
FOXA1-201ENST00000250448 HIST2H2BDQ6DRA6 164 aa12.7□□□□□ -0.38
FOXA1-201ENST00000250448 INSL3P51460 131 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms