RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 ZNF292O60281 2723 aa13.96□□□□□ -0.18
PTPN12-201ENST00000248594 A0A087WWL8 130 aa13.95□□□□□ -0.18
PTPN12-201ENST00000248594 GATA4P43694 442 aa13.95□□□□□ -0.18
PTPN12-201ENST00000248594 TRIAP1O43715 76 aa13.95□□□□□ -0.18
PTPN12-201ENST00000248594 ECSCRQ19T08 205 aa13.95□□□□□ -0.18
PTPN12-201ENST00000248594 LINC00527Q9UJ94 153 aa13.95□□□□□ -0.18
PTPN12-201ENST00000248594 SBSPONQ8IVN8 264 aa13.95□□□□□ -0.18
PTPN12-201ENST00000248594 IGLV3-9A0A075B6K5 115 aa13.94□□□□□ -0.18
PTPN12-201ENST00000248594 SLC25A29Q8N8R3 303 aa13.94□□□□□ -0.18
PTPN12-201ENST00000248594 IGHV7-4-1A0A0J9YVY3 117 aa13.94□□□□□ -0.18
PTPN12-201ENST00000248594 C17orf100A8MU93 164 aa13.94□□□□□ -0.18
PTPN12-201ENST00000248594 JPT2Q9H910 190 aa13.94□□□□□ -0.18
PTPN12-201ENST00000248594 BUB1B-PAK6H3BSN5 160 aa13.93□□□□□ -0.18
PTPN12-201ENST00000248594 LGALS9O00182 355 aa13.93□□□□□ -0.18
PTPN12-201ENST00000248594 CD3EP07766 207 aa13.93□□□□□ -0.18
PTPN12-201ENST00000248594 DUX5Q96PT3 197 aa13.93□□□□□ -0.18
PTPN12-201ENST00000248594 PTPRQQ9UMZ3 2332 aa13.93□□□□□ -0.18
PTPN12-201ENST00000248594 LINC01619G3V211 115 aa13.93□□□□□ -0.18
PTPN12-201ENST00000248594 RPL13AP40429 203 aaKnown RBP13.93□□□□□ -0.18
PTPN12-201ENST00000248594 THBDP07204 575 aa13.92□□□□□ -0.18
PTPN12-201ENST00000248594 CNFNQ9BYD5 112 aa13.92□□□□□ -0.18
PTPN12-201ENST00000248594 TRAV25A0A0B4J276 109 aa13.92□□□□□ -0.18
PTPN12-201ENST00000248594 TMEM178BH3BS89 294 aa13.92□□□□□ -0.18
PTPN12-201ENST00000248594 EIF4EBP3O60516 100 aaPredicted RBP13.92□□□□□ -0.18
PTPN12-201ENST00000248594 CRYGDP07320 174 aa13.92□□□□□ -0.18
PTPN12-201ENST00000248594 LINC01546A6NGU7 62 aa13.92□□□□□ -0.18
PTPN12-201ENST00000248594 GNRH2O43555 120 aa13.92□□□□□ -0.18
PTPN12-201ENST00000248594 HERVK_113P63121 156 aa13.92□□□□□ -0.18
PTPN12-201ENST00000248594 LINC01587Q99440 93 aa13.92□□□□□ -0.18
PTPN12-201ENST00000248594 CRYGBP07316 175 aa13.91□□□□□ -0.18
PTPN12-201ENST00000248594 ZNRF2Q8NHG8 242 aa13.91□□□□□ -0.18
PTPN12-201ENST00000248594 C16orf92Q96LL3 132 aa13.91□□□□□ -0.18
PTPN12-201ENST00000248594 SLC50A1Q9BRV3 221 aa13.91□□□□□ -0.18
PTPN12-201ENST00000248594 TRBV10-2A0A0K0K1G8 114 aa13.91□□□□□ -0.18
PTPN12-201ENST00000248594 NPFFO15130 113 aa13.91□□□□□ -0.18
PTPN12-201ENST00000248594 UBE2E1P51965 193 aa13.91□□□□□ -0.18
PTPN12-201ENST00000248594 KLRB1Q12918 225 aa13.9□□□□□ -0.18
PTPN12-201ENST00000248594 RNASE13Q5GAN3 156 aaKnown RBP13.9□□□□□ -0.18
PTPN12-201ENST00000248594 PRR9Q5T870 116 aa13.9□□□□□ -0.18
PTPN12-201ENST00000248594 TMEM101Q96IK0 257 aa13.9□□□□□ -0.18
PTPN12-201ENST00000248594 RNASE4P34096 147 aaKnown RBP13.9□□□□□ -0.18
PTPN12-201ENST00000248594 DAND5Q8N907 189 aa13.9□□□□□ -0.18
PTPN12-201ENST00000248594 FANCD2OSQ96PS1 177 aa13.9□□□□□ -0.18
PTPN12-201ENST00000248594 MSRB2Q9Y3D2 182 aa13.9□□□□□ -0.18
PTPN12-201ENST00000248594 NBR2O15453 112 aa13.9□□□□□ -0.18
PTPN12-201ENST00000248594 IGLV4-69A0A075B6H9 119 aa13.89□□□□□ -0.19
PTPN12-201ENST00000248594 CLEC19AQ6UXS0 136 aa13.89□□□□□ -0.19
PTPN12-201ENST00000248594 LINC00311Q8N616 119 aa13.89□□□□□ -0.19
PTPN12-201ENST00000248594 TMEM263Q8WUH6 116 aaKnown RBP13.89□□□□□ -0.19
PTPN12-201ENST00000248594 DPH3P1Q9H4G8 78 aa13.89□□□□□ -0.19
PTPN12-201ENST00000248594 FAM19A5Q7Z5A7 132 aaPredicted RBP13.89□□□□□ -0.19
PTPN12-201ENST00000248594 TMEM126AQ9H061 195 aa13.89□□□□□ -0.19
PTPN12-201ENST00000248594 CTSGP08311 255 aa13.88□□□□□ -0.19
PTPN12-201ENST00000248594 COX6CP09669 75 aa13.88□□□□□ -0.19
PTPN12-201ENST00000248594 BSNQ9UPA5 3926 aa13.88□□□□□ -0.19
PTPN12-201ENST00000248594 TRAV17A0A0B4J275 112 aa13.88□□□□□ -0.19
PTPN12-201ENST00000248594 H7C423 109 aa13.87□□□□□ -0.19
PTPN12-201ENST00000248594 TSHBP01222 138 aa13.87□□□□□ -0.19
PTPN12-201ENST00000248594 PLA2G2CQ5R387 149 aa13.87□□□□□ -0.19
PTPN12-201ENST00000248594 F6UB75 175 aa13.87□□□□□ -0.19
PTPN12-201ENST00000248594 MDFICQ9P1T7 246 aa13.87□□□□□ -0.19
PTPN12-201ENST00000248594 PRRC2AP48634 2157 aaKnown RBP13.86□□□□□ -0.19
PTPN12-201ENST00000248594 BSPH1Q075Z2 132 aa13.86□□□□□ -0.19
PTPN12-201ENST00000248594 A0A0J9YXV3 536 aa13.86□□□□□ -0.19
PTPN12-201ENST00000248594 A8MZ25 164 aa13.86□□□□□ -0.19
PTPN12-201ENST00000248594 Q6Q795 121 aa13.86□□□□□ -0.19
PTPN12-201ENST00000248594 C15orf32Q32M92 178 aa13.85□□□□□ -0.19
PTPN12-201ENST00000248594 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.85□□□□□ -0.19
PTPN12-201ENST00000248594 CSMD2Q7Z408 3487 aa13.85□□□□□ -0.19
PTPN12-201ENST00000248594 SMIM9A6NGZ8 99 aa13.85□□□□□ -0.19
PTPN12-201ENST00000248594 PIP4P1Q86T03 277 aa13.85□□□□□ -0.19
PTPN12-201ENST00000248594 FAM215AQ9Y5M1 114 aa13.85□□□□□ -0.19
PTPN12-201ENST00000248594 F8W735 103 aaPredicted RBP13.84□□□□□ -0.19
PTPN12-201ENST00000248594 NDUFA7O95182 113 aa13.84□□□□□ -0.19
PTPN12-201ENST00000248594 NSUN5P1Q3KNT7 163 aa13.84□□□□□ -0.19
PTPN12-201ENST00000248594 PRR30Q53SZ7 412 aaPredicted RBP13.84□□□□□ -0.19
PTPN12-201ENST00000248594 M0R2P5 195 aa13.84□□□□□ -0.19
PTPN12-201ENST00000248594 NRGNQ92686 78 aa13.84□□□□□ -0.19
PTPN12-201ENST00000248594 ICOSQ9Y6W8 199 aa13.84□□□□□ -0.19
PTPN12-201ENST00000248594 VPS13CQ709C8 3753 aa13.83□□□□□ -0.2
PTPN12-201ENST00000248594 ZNF883P0CG24 379 aa13.83□□□□□ -0.2
PTPN12-201ENST00000248594 GAGE2AQ6NT46 116 aa13.83□□□□□ -0.2
PTPN12-201ENST00000248594 LINC00477Q96M19 166 aa13.83□□□□□ -0.2
PTPN12-201ENST00000248594 TLN2Q9Y4G6 2542 aa13.83□□□□□ -0.2
PTPN12-201ENST00000248594 hADV29S1A0JD25 119 aa13.83□□□□□ -0.2
PTPN12-201ENST00000248594 IGLV1-47P01700 117 aa13.83□□□□□ -0.2
PTPN12-201ENST00000248594 PAPPA-AS1Q5QFB9 102 aa13.82□□□□□ -0.2
PTPN12-201ENST00000248594 IGLV11-55A0A075B6I3 123 aa13.82□□□□□ -0.2
PTPN12-201ENST00000248594 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.82□□□□□ -0.2
PTPN12-201ENST00000248594 SDHAF1A6NFY7 115 aa13.82□□□□□ -0.2
PTPN12-201ENST00000248594 IGKV3-20P01619 116 aa13.82□□□□□ -0.2
PTPN12-201ENST00000248594 ZNF625Q96I27 306 aaPredicted RBP13.82□□□□□ -0.2
PTPN12-201ENST00000248594 USP9YO00507 2555 aaPredicted RBP13.82□□□□□ -0.2
PTPN12-201ENST00000248594 POLQO75417 2590 aa13.81□□□□□ -0.2
PTPN12-201ENST00000248594 DNAJC30Q96LL9 226 aa13.81□□□□□ -0.2
PTPN12-201ENST00000248594 IGHG3P01860 377 aa13.81□□□□□ -0.2
PTPN12-201ENST00000248594 PTPN13Q12923 2485 aa13.81□□□□□ -0.2
PTPN12-201ENST00000248594 TRAV13-1A0A0B4J241 112 aa13.8□□□□□ -0.2
PTPN12-201ENST00000248594 CRYBG3Q68DQ2 2970 aa13.8□□□□□ -0.2
PTPN12-201ENST00000248594 C3orf22Q8N5N4 141 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms