RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 SIRPDQ9H106 197 aa10.51□□□□□ -0.73
NCLN-201ENST00000246117 A0A1W2PPM0 123 aa10.5□□□□□ -0.73
NCLN-201ENST00000246117 LMO4P61968 165 aa10.5□□□□□ -0.73
NCLN-201ENST00000246117 STHQ8IWL8 128 aa10.5□□□□□ -0.73
NCLN-201ENST00000246117 NDUFA4O00483 81 aa10.5□□□□□ -0.73
NCLN-201ENST00000246117 IGHV7-4-1A0A0J9YVY3 117 aa10.49□□□□□ -0.73
NCLN-201ENST00000246117 COX6CP09669 75 aa10.49□□□□□ -0.73
NCLN-201ENST00000246117 OR13C6PQ8NH95 151 aa10.49□□□□□ -0.73
NCLN-201ENST00000246117 YAE1D1Q9NRH1 226 aa10.49□□□□□ -0.73
NCLN-201ENST00000246117 C11orf21Q9P2W6 132 aa10.49□□□□□ -0.73
NCLN-201ENST00000246117 LY6LH3BQJ8 138 aa10.49□□□□□ -0.73
NCLN-201ENST00000246117 APRG1Q8IVJ8 170 aa10.49□□□□□ -0.73
NCLN-201ENST00000246117 PRM2P04554 102 aa10.49□□□□□ -0.73
NCLN-201ENST00000246117 LY6G5BQ8NDX9 201 aa10.49□□□□□ -0.73
NCLN-201ENST00000246117 TEX48A0A1B0GUV7 120 aa10.48□□□□□ -0.73
NCLN-201ENST00000246117 TMEM190Q8WZ59 177 aa10.48□□□□□ -0.73
NCLN-201ENST00000246117 TSSC4Q9Y5U2 329 aaPredicted RBP10.48□□□□□ -0.73
NCLN-201ENST00000246117 ODF1Q14990 250 aa10.48□□□□□ -0.73
NCLN-201ENST00000246117 SLURP1P55000 103 aa10.47□□□□□ -0.73
NCLN-201ENST00000246117 K7EP34 96 aa10.47□□□□□ -0.73
NCLN-201ENST00000246117 PAPPA-AS1Q5QFB9 102 aa10.47□□□□□ -0.73
NCLN-201ENST00000246117 C20orf173Q96LM9 149 aa10.47□□□□□ -0.73
NCLN-201ENST00000246117 MDFICQ9P1T7 246 aa10.47□□□□□ -0.73
NCLN-201ENST00000246117 MYMXA0A1B0GTQ4 84 aa10.47□□□□□ -0.73
NCLN-201ENST00000246117 ODF3BA8MYP8 253 aa10.47□□□□□ -0.73
NCLN-201ENST00000246117 EDN2P20800 178 aa10.47□□□□□ -0.73
NCLN-201ENST00000246117 WFDC2Q14508 124 aa10.47□□□□□ -0.73
NCLN-201ENST00000246117 A0A087WX48 190 aa10.46□□□□□ -0.73
NCLN-201ENST00000246117 C12orf74Q32Q52 190 aa10.46□□□□□ -0.73
NCLN-201ENST00000246117 CEND1Q8N111 149 aa10.46□□□□□ -0.73
NCLN-201ENST00000246117 C9JAW5 83 aa10.46□□□□□ -0.74
NCLN-201ENST00000246117 CDKN1BP46527 198 aa10.46□□□□□ -0.74
NCLN-201ENST00000246117 PAX2Q02962 417 aa10.46□□□□□ -0.74
NCLN-201ENST00000246117 SIGMAR1Q99720 223 aa10.45□□□□□ -0.74
NCLN-201ENST00000246117 TNRC18O15417 2968 aaPredicted RBP10.45□□□□□ -0.74
NCLN-201ENST00000246117 IGHV1OR15-1A0A075B7D0 117 aa10.45□□□□□ -0.74
NCLN-201ENST00000246117 LINC01559Q495D7 138 aa10.45□□□□□ -0.74
NCLN-201ENST00000246117 ERG28Q9UKR5 140 aa10.45□□□□□ -0.74
NCLN-201ENST00000246117 HOXD3P31249 432 aaPredicted RBP10.45□□□□□ -0.74
NCLN-201ENST00000246117 MRGPRG-AS1Q2M3A8 158 aa10.45□□□□□ -0.74
NCLN-201ENST00000246117 CEMP1Q6PRD7 247 aaPredicted RBP10.45□□□□□ -0.74
NCLN-201ENST00000246117 TNFRSF13BO14836 293 aaPredicted RBP10.44□□□□□ -0.74
NCLN-201ENST00000246117 FGF6P10767 208 aa10.44□□□□□ -0.74
NCLN-201ENST00000246117 CIRBPQ14011 172 aaKnown RBP10.44□□□□□ -0.74
NCLN-201ENST00000246117 PRR9Q5T870 116 aa10.44□□□□□ -0.74
NCLN-201ENST00000246117 C16orf54Q6UWD8 224 aa10.44□□□□□ -0.74
NCLN-201ENST00000246117 BOD1L2Q8IYS8 172 aa10.44□□□□□ -0.74
NCLN-201ENST00000246117 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.44□□□□□ -0.74
NCLN-201ENST00000246117 IGKV2-29A2NJV5 120 aaPredicted RBP10.44□□□□□ -0.74
NCLN-201ENST00000246117 FSTL3O95633 263 aa10.44□□□□□ -0.74
NCLN-201ENST00000246117 PF4P02776 101 aa10.44□□□□□ -0.74
NCLN-201ENST00000246117 P0DMU3 169 aa10.44□□□□□ -0.74
NCLN-201ENST00000246117 FAM231AP0DMU4 169 aa10.44□□□□□ -0.74
NCLN-201ENST00000246117 FAM231CP0DMU5 169 aa10.44□□□□□ -0.74
NCLN-201ENST00000246117 PMVKQ15126 192 aa10.44□□□□□ -0.74
NCLN-201ENST00000246117 LINC01356Q8N9X3 169 aa10.44□□□□□ -0.74
NCLN-201ENST00000246117 Q96MF0 132 aa10.44□□□□□ -0.74
NCLN-201ENST00000246117 TRGV11A0A075B6L2 103 aa10.43□□□□□ -0.74
NCLN-201ENST00000246117 A0A0J9YXV3 536 aa10.43□□□□□ -0.74
NCLN-201ENST00000246117 DEFB130BP0DP73 79 aa10.43□□□□□ -0.74
NCLN-201ENST00000246117 DEFB130AP0DP74 79 aa10.43□□□□□ -0.74
NCLN-201ENST00000246117 SUMO4Q6EEV6 95 aa10.43□□□□□ -0.74
NCLN-201ENST00000246117 GATD1Q8NB37 220 aa10.43□□□□□ -0.74
NCLN-201ENST00000246117 Q8N1Y9 231 aa10.43□□□□□ -0.74
NCLN-201ENST00000246117 GAGE12JA6NER3 117 aa10.43□□□□□ -0.74
NCLN-201ENST00000246117 IGLC6P0CF74 106 aa10.43□□□□□ -0.74
NCLN-201ENST00000246117 GAGE4Q13068 117 aa10.43□□□□□ -0.74
NCLN-201ENST00000246117 GAGE5Q13069 117 aa10.43□□□□□ -0.74
NCLN-201ENST00000246117 CHCHD5Q9BSY4 110 aa10.43□□□□□ -0.74
NCLN-201ENST00000246117 A8MWV9 139 aa10.42□□□□□ -0.74
NCLN-201ENST00000246117 ZFAND3Q9H8U3 227 aa10.42□□□□□ -0.74
NCLN-201ENST00000246117 PEMTQ9UBM1 199 aa10.42□□□□□ -0.74
NCLN-201ENST00000246117 TRGV4A0A0C4DH28 118 aa10.42□□□□□ -0.74
NCLN-201ENST00000246117 FBXL19-AS1Q494R0 122 aa10.42□□□□□ -0.74
NCLN-201ENST00000246117 MAPKAPK5-AS1Q8N8E1 139 aa10.42□□□□□ -0.74
NCLN-201ENST00000246117 DLX4Q92988 240 aaPredicted RBP10.42□□□□□ -0.74
NCLN-201ENST00000246117 TIMM21Q9BVV7 248 aa10.42□□□□□ -0.74
NCLN-201ENST00000246117 DAND5Q8N907 189 aa10.42□□□□□ -0.74
NCLN-201ENST00000246117 PTH2Q96A98 100 aa10.42□□□□□ -0.74
NCLN-201ENST00000246117 CFAP46Q8IYW2 2715 aa10.41□□□□□ -0.74
NCLN-201ENST00000246117 ZNRF2Q8NHG8 242 aa10.41□□□□□ -0.74
NCLN-201ENST00000246117 NDUFS8O00217 210 aa10.41□□□□□ -0.74
NCLN-201ENST00000246117 RNF185Q96GF1 192 aa10.41□□□□□ -0.74
NCLN-201ENST00000246117 IGHV4OR15-8A0A075B7B6 117 aa10.41□□□□□ -0.74
NCLN-201ENST00000246117 A0A087WW49 117 aa10.41□□□□□ -0.74
NCLN-201ENST00000246117 SPINK8P0C7L1 97 aa10.41□□□□□ -0.74
NCLN-201ENST00000246117 ZNF493Q6ZR52 646 aa10.41□□□□□ -0.74
NCLN-201ENST00000246117 C10orf105Q8TEF2 133 aa10.41□□□□□ -0.74
NCLN-201ENST00000246117 ASH1LQ9NR48 2969 aaKnown RBP10.4□□□□□ -0.74
NCLN-201ENST00000246117 CHD6Q8TD26 2715 aa10.4□□□□□ -0.74
NCLN-201ENST00000246117 A0A096LPF7 62 aa10.4□□□□□ -0.74
NCLN-201ENST00000246117 C11orf86A6NJI1 115 aa10.4□□□□□ -0.74
NCLN-201ENST00000246117 J3QQQ9 107 aa10.4□□□□□ -0.74
NCLN-201ENST00000246117 F8W735 103 aaPredicted RBP10.4□□□□□ -0.74
NCLN-201ENST00000246117 FLNCQ14315 2725 aa10.4□□□□□ -0.74
NCLN-201ENST00000246117 C2orf91Q6ZV80 131 aa10.4□□□□□ -0.75
NCLN-201ENST00000246117 RELNP78509 3460 aa10.4□□□□□ -0.75
NCLN-201ENST00000246117 TRAV8-3A0A0A6YYJ7 113 aa10.39□□□□□ -0.75
NCLN-201ENST00000246117 HIST2H2BCQ6DN03 193 aa10.39□□□□□ -0.75
NCLN-201ENST00000246117 MUC4Q99102 2169 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms