RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ZNF688P0C7X2 276 aa10.74□□□□□ -0.69
HIF3A-202ENST00000244303 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
HIF3A-202ENST00000244303 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
HIF3A-202ENST00000244303 DEFB104AQ8WTQ1 72 aa10.74□□□□□ -0.69
HIF3A-202ENST00000244303 ZNF580Q9UK33 172 aa10.74□□□□□ -0.69
HIF3A-202ENST00000244303 TSSC4Q9Y5U2 329 aaPredicted RBP10.74□□□□□ -0.69
HIF3A-202ENST00000244303 A0A087WWL8 130 aa10.73□□□□□ -0.69
HIF3A-202ENST00000244303 PRSS29PA6NIE9 313 aa10.73□□□□□ -0.69
HIF3A-202ENST00000244303 DUSP14O95147 198 aaKnown RBP10.73□□□□□ -0.69
HIF3A-202ENST00000244303 SMAGPQ0VAQ4 97 aa10.73□□□□□ -0.69
HIF3A-202ENST00000244303 SUMO4Q6EEV6 95 aa10.73□□□□□ -0.69
HIF3A-202ENST00000244303 IGHV4OR15-8A0A075B7B6 117 aa10.73□□□□□ -0.69
HIF3A-202ENST00000244303 A0A087WW49 117 aa10.73□□□□□ -0.69
HIF3A-202ENST00000244303 MYMXA0A1B0GTQ4 84 aa10.73□□□□□ -0.69
HIF3A-202ENST00000244303 CIDEAO60543 219 aa10.73□□□□□ -0.69
HIF3A-202ENST00000244303 KRTAP10-9P60411 292 aa10.73□□□□□ -0.69
HIF3A-202ENST00000244303 GAGE12HA6NDE8 117 aa10.72□□□□□ -0.69
HIF3A-202ENST00000244303 IGKV3-20P01619 116 aa10.72□□□□□ -0.69
HIF3A-202ENST00000244303 CD300EQ496F6 205 aaPredicted RBP10.72□□□□□ -0.69
HIF3A-202ENST00000244303 AMTNQ6UX39 209 aa10.72□□□□□ -0.69
HIF3A-202ENST00000244303 SPANXB1Q9NS25 103 aaPredicted RBP10.72□□□□□ -0.69
HIF3A-202ENST00000244303 TRAV12-2A0A075B6T6 113 aa10.72□□□□□ -0.69
HIF3A-202ENST00000244303 SH2D6Q7Z4S9 175 aa10.72□□□□□ -0.69
HIF3A-202ENST00000244303 CYSLTR1Q9Y271 337 aa10.72□□□□□ -0.69
HIF3A-202ENST00000244303 FAM208BQ5VWN6 2430 aa10.71□□□□□ -0.69
HIF3A-202ENST00000244303 TRBV7-3A0A075B6L6 115 aa10.71□□□□□ -0.69
HIF3A-202ENST00000244303 F5H697 171 aa10.71□□□□□ -0.69
HIF3A-202ENST00000244303 CRYGDP07320 174 aa10.71□□□□□ -0.69
HIF3A-202ENST00000244303 POLR2KP53803 58 aaKnown RBP10.71□□□□□ -0.69
HIF3A-202ENST00000244303 ETDBQ3ZM63 59 aa10.71□□□□□ -0.69
HIF3A-202ENST00000244303 GAGE13Q4V321 117 aa10.71□□□□□ -0.69
HIF3A-202ENST00000244303 MTURNQ8N3F0 131 aa10.71□□□□□ -0.69
HIF3A-202ENST00000244303 TP53TG1Q9Y2A0 90 aa10.71□□□□□ -0.69
HIF3A-202ENST00000244303 TSHBP01222 138 aa10.7□□□□□ -0.7
HIF3A-202ENST00000244303 RPL32P62910 135 aaKnown RBP10.7□□□□□ -0.7
HIF3A-202ENST00000244303 SCGB2A2Q13296 93 aa10.7□□□□□ -0.7
HIF3A-202ENST00000244303 ZFP2Q6ZN57 461 aa10.7□□□□□ -0.7
HIF3A-202ENST00000244303 PRADC1Q9BSG0 188 aa10.7□□□□□ -0.7
HIF3A-202ENST00000244303 DOPEY2Q9Y3R5 2298 aa10.7□□□□□ -0.7
HIF3A-202ENST00000244303 A0A0J9YX75 114 aa10.7□□□□□ -0.7
HIF3A-202ENST00000244303 FAM74A4Q5TZK3 123 aa10.7□□□□□ -0.7
HIF3A-202ENST00000244303 ANKRD17O75179 2603 aaKnown RBP10.7□□□□□ -0.7
HIF3A-202ENST00000244303 IGHV3-16A0A0C4DH30 117 aa10.69□□□□□ -0.7
HIF3A-202ENST00000244303 LGALS1P09382 135 aaKnown RBP10.69□□□□□ -0.7
HIF3A-202ENST00000244303 IGHV4-31P0DP07 118 aa10.69□□□□□ -0.7
HIF3A-202ENST00000244303 SCGB1A1P11684 91 aa10.69□□□□□ -0.7
HIF3A-202ENST00000244303 SNRPD3P62318 126 aaKnown RBP10.69□□□□□ -0.7
HIF3A-202ENST00000244303 RRN3P1Q2M238 152 aa10.69□□□□□ -0.7
HIF3A-202ENST00000244303 MDFICQ9P1T7 246 aa10.69□□□□□ -0.7
HIF3A-202ENST00000244303 ZANQ9Y493 2812 aa10.69□□□□□ -0.7
HIF3A-202ENST00000244303 RPL39P62891 51 aaKnown RBP10.69□□□□□ -0.7
HIF3A-202ENST00000244303 C9orf85Q96MD7 179 aa10.69□□□□□ -0.7
HIF3A-202ENST00000244303 ODF3Q96PU9 254 aa10.69□□□□□ -0.7
HIF3A-202ENST00000244303 SDHAF1A6NFY7 115 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 IGIPA6NJ69 53 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 LINC01619G3V211 115 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 K7EQG2 157 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 VCYO14598 125 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 SYNJ2BPP57105 145 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 KIR2DL4Q99706 377 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 SPAG8Q99932 426 aaPredicted RBP10.68□□□□□ -0.7
HIF3A-202ENST00000244303 IGLV4-69A0A075B6H9 119 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 TMEM89A2RUT3 159 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 LGALS9O00182 355 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 HOXA3O43365 443 aaPredicted RBP10.68□□□□□ -0.7
HIF3A-202ENST00000244303 FSHBP01225 129 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 EMP1P54849 157 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 SPINK13Q1W4C9 94 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 DEFB113Q30KQ7 82 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 Q8N1Y9 231 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 DUX5Q96PT3 197 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 BEX4Q9NWD9 120 aaPredicted RBP10.68□□□□□ -0.7
HIF3A-202ENST00000244303 SORL1Q92673 2214 aa10.68□□□□□ -0.7
HIF3A-202ENST00000244303 C11orf86A6NJI1 115 aa10.67□□□□□ -0.7
HIF3A-202ENST00000244303 ZNF815PA8K554 130 aa10.67□□□□□ -0.7
HIF3A-202ENST00000244303 FBN2P35556 2912 aa10.67□□□□□ -0.7
HIF3A-202ENST00000244303 USP9YO00507 2555 aaPredicted RBP10.66□□□□□ -0.7
HIF3A-202ENST00000244303 A0A1B0GWB2 263 aa10.66□□□□□ -0.7
HIF3A-202ENST00000244303 ZNF56Q15929 161 aa10.66□□□□□ -0.7
HIF3A-202ENST00000244303 Q6YL49 198 aa10.66□□□□□ -0.7
HIF3A-202ENST00000244303 POLQO75417 2590 aa10.66□□□□□ -0.7
HIF3A-202ENST00000244303 UBR5O95071 2799 aaPredicted RBP10.66□□□□□ -0.7
HIF3A-202ENST00000244303 LRRK2Q5S007 2527 aa10.66□□□□□ -0.7
HIF3A-202ENST00000244303 IGHV1OR15-1A0A075B7D0 117 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 TRBV27A0A0K0K1C4 114 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 LINC01549A6NIU2 74 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 PMVKQ15126 192 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 Q5PR19 223 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 MORN3Q6PF18 240 aaPredicted RBP10.65□□□□□ -0.7
HIF3A-202ENST00000244303 SYT8Q8NBV8 401 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 PLEKHB2Q96CS7 222 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 MRPL16Q9NX20 251 aaKnown RBP10.65□□□□□ -0.7
HIF3A-202ENST00000244303 VPREB3Q9UKI3 123 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 ZNF256Q9Y2P7 627 aaPredicted RBP10.65□□□□□ -0.7
HIF3A-202ENST00000244303 TRBV6-5A0A0K0K1A5 114 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 SCGB1D4Q6XE38 83 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 KLHL30-AS1Q8NEE0 82 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 SPATA25Q9BR10 227 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 PGPEP1Q9NXJ5 209 aa10.65□□□□□ -0.7
HIF3A-202ENST00000244303 LRRC75A-AS1Q8N1F1 130 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms