RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 LGALS9CQ6DKI2 356 aa13.61□□□□□ -0.23
HOXC11-201ENST00000243082 C2orf88Q9BSF0 95 aa13.61□□□□□ -0.23
HOXC11-201ENST00000243082 ST20Q9HBF5 79 aa13.61□□□□□ -0.23
HOXC11-201ENST00000243082 C18orf15Q96N68 181 aa13.6□□□□□ -0.23
HOXC11-201ENST00000243082 NOTCH2Q04721 2471 aa13.6□□□□□ -0.23
HOXC11-201ENST00000243082 SMIM17P0DL12 118 aa13.59□□□□□ -0.23
HOXC11-201ENST00000243082 PROK1P58294 105 aa13.59□□□□□ -0.23
HOXC11-201ENST00000243082 Q6ZN92 141 aa13.59□□□□□ -0.23
HOXC11-201ENST00000243082 A0A087WWL8 130 aa13.59□□□□□ -0.23
HOXC11-201ENST00000243082 ODF3L2Q3SX64 289 aa13.59□□□□□ -0.23
HOXC11-201ENST00000243082 WNK1Q9H4A3 2382 aa13.58□□□□□ -0.23
HOXC11-201ENST00000243082 TRGV11A0A075B6L2 103 aa13.58□□□□□ -0.24
HOXC11-201ENST00000243082 ADARB2-AS1A8MUL3 147 aa13.58□□□□□ -0.24
HOXC11-201ENST00000243082 MRPL52Q86TS9 123 aaKnown RBP13.58□□□□□ -0.24
HOXC11-201ENST00000243082 GOLT1BQ9Y3E0 138 aa13.58□□□□□ -0.24
HOXC11-201ENST00000243082 HSBP1L1C9JCN9 74 aa13.57□□□□□ -0.24
HOXC11-201ENST00000243082 SYT8Q8NBV8 401 aa13.57□□□□□ -0.24
HOXC11-201ENST00000243082 JMJD8Q96S16 334 aa13.57□□□□□ -0.24
HOXC11-201ENST00000243082 CBY3A6NI87 242 aa13.57□□□□□ -0.24
HOXC11-201ENST00000243082 PPP1R17O96001 155 aa13.57□□□□□ -0.24
HOXC11-201ENST00000243082 HNRNPA3P51991 378 aaKnown RBP13.56□□□□□ -0.24
HOXC11-201ENST00000243082 SUMO4Q6EEV6 95 aa13.56□□□□□ -0.24
HOXC11-201ENST00000243082 CRYGDP07320 174 aa13.56□□□□□ -0.24
HOXC11-201ENST00000243082 CLUHP3Q96NS8 147 aa13.55□□□□□ -0.24
HOXC11-201ENST00000243082 DKK2Q9UBU2 259 aa13.54□□□□□ -0.24
HOXC11-201ENST00000243082 SETXQ7Z333 2677 aaKnown RBP13.54□□□□□ -0.24
HOXC11-201ENST00000243082 NIPBLQ6KC79 2804 aaeCLIP13.54□□□□□ -0.24
HOXC11-201ENST00000243082 K7EMI3 77 aa13.54□□□□□ -0.24
HOXC11-201ENST00000243082 NUDT3O95989 172 aa13.54□□□□□ -0.24
HOXC11-201ENST00000243082 PRM2P04554 102 aa13.54□□□□□ -0.24
HOXC11-201ENST00000243082 HTN1P15515 57 aa13.54□□□□□ -0.24
HOXC11-201ENST00000243082 ZNF876PQ49A33 203 aa13.54□□□□□ -0.24
HOXC11-201ENST00000243082 ORMDL2Q53FV1 153 aa13.54□□□□□ -0.24
HOXC11-201ENST00000243082 TP73-AS1Q9UF72 201 aa13.54□□□□□ -0.24
HOXC11-201ENST00000243082 A0A1B0GV90 55 aa13.53□□□□□ -0.24
HOXC11-201ENST00000243082 F5H697 171 aa13.53□□□□□ -0.24
HOXC11-201ENST00000243082 NSUN5P1Q3KNT7 163 aa13.53□□□□□ -0.24
HOXC11-201ENST00000243082 FAM74A4Q5TZK3 123 aa13.53□□□□□ -0.24
HOXC11-201ENST00000243082 CSTL1Q9H114 145 aa13.53□□□□□ -0.24
HOXC11-201ENST00000243082 MRPS16Q9Y3D3 137 aaKnown RBP13.53□□□□□ -0.24
HOXC11-201ENST00000243082 ATP5LO75964 103 aa13.52□□□□□ -0.24
HOXC11-201ENST00000243082 KRTAP10-3P60369 221 aa13.52□□□□□ -0.24
HOXC11-201ENST00000243082 RPL32P62910 135 aaKnown RBP13.52□□□□□ -0.24
HOXC11-201ENST00000243082 ODF1Q14990 250 aa13.52□□□□□ -0.24
HOXC11-201ENST00000243082 INAFM1C9JVW0 142 aa13.52□□□□□ -0.25
HOXC11-201ENST00000243082 SAP30O75446 220 aa13.52□□□□□ -0.25
HOXC11-201ENST00000243082 PRSS1P07477 247 aa13.52□□□□□ -0.25
HOXC11-201ENST00000243082 POLR2KP53803 58 aaKnown RBP13.52□□□□□ -0.25
HOXC11-201ENST00000243082 OR11H12B2RN74 326 aa13.51□□□□□ -0.25
HOXC11-201ENST00000243082 ZMAT4Q9H898 229 aa13.51□□□□□ -0.25
HOXC11-201ENST00000243082 ANKRD39Q53RE8 183 aa13.51□□□□□ -0.25
HOXC11-201ENST00000243082 NEGR1Q7Z3B1 354 aa13.51□□□□□ -0.25
HOXC11-201ENST00000243082 TOMM6Q96B49 74 aa13.51□□□□□ -0.25
HOXC11-201ENST00000243082 LINC00467Q9BRT7 94 aa13.51□□□□□ -0.25
HOXC11-201ENST00000243082 M0QY20 66 aa13.5□□□□□ -0.25
HOXC11-201ENST00000243082 MORN3Q6PF18 240 aaPredicted RBP13.5□□□□□ -0.25
HOXC11-201ENST00000243082 SLC25A34Q6PIV7 304 aa13.5□□□□□ -0.25
HOXC11-201ENST00000243082 STHQ8IWL8 128 aa13.5□□□□□ -0.25
HOXC11-201ENST00000243082 STPG4Q8N801 248 aa13.5□□□□□ -0.25
HOXC11-201ENST00000243082 TRBV6-5A0A0K0K1A5 114 aa13.49□□□□□ -0.25
HOXC11-201ENST00000243082 INSP01308 110 aa13.49□□□□□ -0.25
HOXC11-201ENST00000243082 IGLV1-51P01701 117 aa13.49□□□□□ -0.25
HOXC11-201ENST00000243082 ZNF56Q15929 161 aa13.49□□□□□ -0.25
HOXC11-201ENST00000243082 TRPT1Q86TN4 253 aaKnown RBP13.49□□□□□ -0.25
HOXC11-201ENST00000243082 LINC01587Q99440 93 aa13.49□□□□□ -0.25
HOXC11-201ENST00000243082 COX8AP10176 69 aa13.48□□□□□ -0.25
HOXC11-201ENST00000243082 BATFQ16520 125 aa13.48□□□□□ -0.25
HOXC11-201ENST00000243082 LURAP1LQ8IV03 231 aa13.47□□□□□ -0.25
HOXC11-201ENST00000243082 C11orf72Q8NBR9 251 aa13.47□□□□□ -0.25
HOXC11-201ENST00000243082 XCL2Q9UBD3 114 aa13.47□□□□□ -0.25
HOXC11-201ENST00000243082 SDHAF1A6NFY7 115 aa13.47□□□□□ -0.25
HOXC11-201ENST00000243082 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.47□□□□□ -0.25
HOXC11-201ENST00000243082 M0R2P5 195 aa13.47□□□□□ -0.25
HOXC11-201ENST00000243082 VCYO14598 125 aa13.47□□□□□ -0.25
HOXC11-201ENST00000243082 ZNF415Q09FC8 603 aa13.47□□□□□ -0.25
HOXC11-201ENST00000243082 C2orf66Q6UXQ4 117 aa13.47□□□□□ -0.25
HOXC11-201ENST00000243082 NDUFA11Q86Y39 141 aa13.47□□□□□ -0.25
HOXC11-201ENST00000243082 TRBV27A0A0K0K1C4 114 aa13.46□□□□□ -0.25
HOXC11-201ENST00000243082 NUTF2P61970 127 aaKnown RBP13.46□□□□□ -0.25
HOXC11-201ENST00000243082 SCGB3A1Q96QR1 104 aa13.46□□□□□ -0.25
HOXC11-201ENST00000243082 HHLA3Q9XRX5 114 aa13.46□□□□□ -0.25
HOXC11-201ENST00000243082 PTH2Q96A98 100 aa13.46□□□□□ -0.26
HOXC11-201ENST00000243082 NSD1Q96L73 2696 aaPredicted RBP13.45□□□□□ -0.26
HOXC11-201ENST00000243082 IGKCP01834 107 aa13.45□□□□□ -0.26
HOXC11-201ENST00000243082 CMC4P56277 68 aaPredicted RBP13.45□□□□□ -0.26
HOXC11-201ENST00000243082 PIK3CD-AS1Q5SR53 167 aa13.45□□□□□ -0.26
HOXC11-201ENST00000243082 C1orf158Q8N1D5 194 aa13.45□□□□□ -0.26
HOXC11-201ENST00000243082 A0A087WX48 190 aa13.44□□□□□ -0.26
HOXC11-201ENST00000243082 FGF6P10767 208 aa13.44□□□□□ -0.26
HOXC11-201ENST00000243082 BEAN1Q3B7T3 259 aa13.44□□□□□ -0.26
HOXC11-201ENST00000243082 UFSP1Q6NVU6 142 aa13.44□□□□□ -0.26
HOXC11-201ENST00000243082 ZFP2Q6ZN57 461 aa13.44□□□□□ -0.26
HOXC11-201ENST00000243082 DEFB104AQ8WTQ1 72 aa13.44□□□□□ -0.26
HOXC11-201ENST00000243082 C19orf73Q9NVV2 129 aa13.44□□□□□ -0.26
HOXC11-201ENST00000243082 MRPL35Q9NZE8 188 aaKnown RBP13.44□□□□□ -0.26
HOXC11-201ENST00000243082 HIVEP1P15822 2718 aa13.44□□□□□ -0.26
HOXC11-201ENST00000243082 KIR2DL4Q99706 377 aa13.44□□□□□ -0.26
HOXC11-201ENST00000243082 FAM110AQ9BQ89 295 aa13.44□□□□□ -0.26
HOXC11-201ENST00000243082 TRAV12-1A0A0B4J245 112 aa13.43□□□□□ -0.26
HOXC11-201ENST00000243082 DPM2O94777 84 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms