RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 J3QLI3 93 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 NXPH4O95158 308 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 IGKCP01834 107 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 PRSS1P07477 247 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 SMIM17P0DL12 118 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 GATA1P15976 413 aaPredicted RBP5.86□□□□□ -1.47
CXCR4-201ENST00000241393 ID1P41134 155 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 FXYD7P58549 80 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 LY6EQ16553 131 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 ORMDL2Q53FV1 153 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 ADAMTSL5Q6ZMM2 481 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 POM121L12Q8N7R1 296 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 Q8N9P0 234 aaPredicted RBP5.86□□□□□ -1.47
CXCR4-201ENST00000241393 ODF3Q96PU9 254 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 RHPN1-AS1Q9BWJ2 59 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 HHLA3Q9XRX5 114 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 AKAP6Q13023 2319 aa5.86□□□□□ -1.47
CXCR4-201ENST00000241393 TRAV12-1A0A0B4J245 112 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 LINC01549A6NIU2 74 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 S100A4P26447 101 aaKnown RBP5.85□□□□□ -1.47
CXCR4-201ENST00000241393 RPL32P62910 135 aaKnown RBP5.85□□□□□ -1.47
CXCR4-201ENST00000241393 BLCAPP62952 87 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 Q6ZVH6 145 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 OR4C5Q8NGB2 326 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 C18orf15Q96N68 181 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 CBY1Q9Y3M2 126 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 ACACBO00763 2458 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 IGHV4OR15-8A0A075B7B6 117 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 A0A087WX48 190 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 C7orf71A4D174 169 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 KLLNB2CW77 178 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 IGHV3-11P01762 117 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 PLNP26678 52 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 PSMB8P28062 276 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 AP1S3Q96PC3 154 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 FOXC2Q99958 501 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 PHLDA3Q9Y5J5 127 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 RELNP78509 3460 aa5.85□□□□□ -1.47
CXCR4-201ENST00000241393 NMUP48645 174 aa5.84□□□□□ -1.47
CXCR4-201ENST00000241393 KRTAP4-2Q9BYR5 136 aa5.84□□□□□ -1.47
CXCR4-201ENST00000241393 DOPEY1Q5JWR5 2465 aa5.83□□□□□ -1.48
CXCR4-201ENST00000241393 A0A087WW49 117 aa5.83□□□□□ -1.48
CXCR4-201ENST00000241393 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.83□□□□□ -1.48
CXCR4-201ENST00000241393 RNASE3P12724 160 aaKnown RBP5.83□□□□□ -1.48
CXCR4-201ENST00000241393 TAL2Q16559 108 aa5.83□□□□□ -1.48
CXCR4-201ENST00000241393 Q6ZQT7 251 aa5.83□□□□□ -1.48
CXCR4-201ENST00000241393 PCP2Q8IVA1 136 aa5.83□□□□□ -1.48
CXCR4-201ENST00000241393 DCANP1Q8TF63 244 aa5.83□□□□□ -1.48
CXCR4-201ENST00000241393 RASL10AQ92737 203 aa5.83□□□□□ -1.48
CXCR4-201ENST00000241393 TOMM6Q96B49 74 aa5.83□□□□□ -1.48
CXCR4-201ENST00000241393 KRTAP4-5Q9BYR2 181 aa5.83□□□□□ -1.48
CXCR4-201ENST00000241393 TRAV26-2A0A0B4J265 109 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 F8VRH5 84 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 LINC01619G3V211 115 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 H7C1H1 209 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 RNASE4P34096 147 aaKnown RBP5.82□□□□□ -1.48
CXCR4-201ENST00000241393 GAGE5Q13069 117 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 GAGE6Q13070 117 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 ZC2HC1BQ5TFG8 222 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 AMMECR1LQ6DCA0 310 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 GTF2H5Q6ZYL4 71 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 Q75L30 129 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 MRPL35Q9NZE8 188 aaKnown RBP5.82□□□□□ -1.48
CXCR4-201ENST00000241393 A0A096LNT2 108 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 IGKV2D-26A0A0A0MRZ7 120 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 TRAV8-6A0A0B4J262 113 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 LGALS9O00182 355 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 FAM159AQ6UWV7 190 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 KIF25-AS1Q9Y6Z4 181 aa5.82□□□□□ -1.48
CXCR4-201ENST00000241393 SPTAN1Q13813 2472 aaKnown RBP5.81□□□□□ -1.48
CXCR4-201ENST00000241393 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.81□□□□□ -1.48
CXCR4-201ENST00000241393 IGSF10Q6WRI0 2623 aa5.81□□□□□ -1.48
CXCR4-201ENST00000241393 F6UB75 175 aa5.81□□□□□ -1.48
CXCR4-201ENST00000241393 SNRPD3P62318 126 aaKnown RBP5.81□□□□□ -1.48
CXCR4-201ENST00000241393 DEFB112Q30KQ8 113 aa5.81□□□□□ -1.48
CXCR4-201ENST00000241393 C14orf178Q8N769 122 aaPredicted RBP5.81□□□□□ -1.48
CXCR4-201ENST00000241393 SCGB3A1Q96QR1 104 aa5.81□□□□□ -1.48
CXCR4-201ENST00000241393 CHAC1Q9BUX1 264 aa5.81□□□□□ -1.48
CXCR4-201ENST00000241393 TRBV25-1A0A075B6N4 114 aa5.8□□□□□ -1.48
CXCR4-201ENST00000241393 K7EQG2 157 aa5.8□□□□□ -1.48
CXCR4-201ENST00000241393 GNRH2O43555 120 aa5.8□□□□□ -1.48
CXCR4-201ENST00000241393 DUSP14O95147 198 aaKnown RBP5.8□□□□□ -1.48
CXCR4-201ENST00000241393 IGHV4-59P01825 116 aa5.8□□□□□ -1.48
CXCR4-201ENST00000241393 LGALS1P09382 135 aaKnown RBP5.8□□□□□ -1.48
CXCR4-201ENST00000241393 LINC00315P59091 139 aa5.8□□□□□ -1.48
CXCR4-201ENST00000241393 UFSP1Q6NVU6 142 aa5.8□□□□□ -1.48
CXCR4-201ENST00000241393 ERASQ7Z444 233 aa5.8□□□□□ -1.48
CXCR4-201ENST00000241393 GTSCR1Q86UQ5 136 aa5.8□□□□□ -1.48
CXCR4-201ENST00000241393 C1QTNF4Q9BXJ3 329 aa5.8□□□□□ -1.48
CXCR4-201ENST00000241393 CFAP46Q8IYW2 2715 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 IGKV2D-30A0A075B6S6 120 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 A0A0J9YX75 114 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 TRBV6-5A0A0K0K1A5 114 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 K7EP34 96 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 MGPP08493 103 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 SMIM13P0DJ93 91 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 CDKN1BP46527 198 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 DEFB1P60022 68 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 NANOS2P60321 138 aaKnown RBP5.79□□□□□ -1.48
CXCR4-201ENST00000241393 C2orf66Q6UXQ4 117 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms