RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 Q6ZUT4 128 aa11.63□□□□□ -0.55
DDX55-201ENST00000238146 C10orf126Q8N4M7 172 aa11.63□□□□□ -0.55
DDX55-201ENST00000238146 ZNRF2Q8NHG8 242 aa11.63□□□□□ -0.55
DDX55-201ENST00000238146 TRBV20-1A0A075B6N2 111 aa11.63□□□□□ -0.55
DDX55-201ENST00000238146 SBSPONQ8IVN8 264 aa11.63□□□□□ -0.55
DDX55-201ENST00000238146 TMEM141Q96I45 108 aa11.63□□□□□ -0.55
DDX55-201ENST00000238146 AMELXQ99217 191 aa11.63□□□□□ -0.55
DDX55-201ENST00000238146 GEMIN7Q9H840 131 aaKnown RBP11.63□□□□□ -0.55
DDX55-201ENST00000238146 MOB4Q9Y3A3 225 aa11.63□□□□□ -0.55
DDX55-201ENST00000238146 VCYO14598 125 aa11.63□□□□□ -0.55
DDX55-201ENST00000238146 LMO4P61968 165 aa11.63□□□□□ -0.55
DDX55-201ENST00000238146 TIMM17AQ99595 171 aa11.63□□□□□ -0.55
DDX55-201ENST00000238146 TRBV7-9A0A0J9YWB2 115 aa11.62□□□□□ -0.55
DDX55-201ENST00000238146 KIR2DL4Q99706 377 aa11.62□□□□□ -0.55
DDX55-201ENST00000238146 TRAV26-1A0A087WT03 109 aa11.62□□□□□ -0.55
DDX55-201ENST00000238146 A0A087WWL8 130 aa11.62□□□□□ -0.55
DDX55-201ENST00000238146 TGFAP01135 160 aa11.62□□□□□ -0.55
DDX55-201ENST00000238146 CRIP2P52943 208 aaPredicted RBP11.62□□□□□ -0.55
DDX55-201ENST00000238146 ZNF876PQ49A33 203 aa11.62□□□□□ -0.55
DDX55-201ENST00000238146 SDHAF1A6NFY7 115 aa11.61□□□□□ -0.55
DDX55-201ENST00000238146 A8MWV9 139 aa11.61□□□□□ -0.55
DDX55-201ENST00000238146 IGHV3-11P01762 117 aa11.61□□□□□ -0.55
DDX55-201ENST00000238146 PRO1854Q9UHT4 67 aa11.61□□□□□ -0.55
DDX55-201ENST00000238146 IGHV3OR16-10A0A075B7F0 116 aa11.6□□□□□ -0.55
DDX55-201ENST00000238146 F5H697 171 aa11.6□□□□□ -0.55
DDX55-201ENST00000238146 J3QQQ9 107 aa11.6□□□□□ -0.55
DDX55-201ENST00000238146 BPESC1Q9GZL8 116 aa11.6□□□□□ -0.55
DDX55-201ENST00000238146 AKAP6Q13023 2319 aa11.6□□□□□ -0.55
DDX55-201ENST00000238146 KLLNB2CW77 178 aa11.6□□□□□ -0.55
DDX55-201ENST00000238146 FAM159AQ6UWV7 190 aa11.6□□□□□ -0.55
DDX55-201ENST00000238146 SCGB1C2P0DMR2 95 aa11.59□□□□□ -0.55
DDX55-201ENST00000238146 RHPN1-AS1Q9BWJ2 59 aa11.59□□□□□ -0.55
DDX55-201ENST00000238146 TRBV27A0A0K0K1C4 114 aa11.59□□□□□ -0.55
DDX55-201ENST00000238146 Q5PR19 223 aa11.59□□□□□ -0.55
DDX55-201ENST00000238146 ANKRD29Q8N6D5 301 aa11.59□□□□□ -0.55
DDX55-201ENST00000238146 FOXC1Q12948 553 aa11.58□□□□□ -0.56
DDX55-201ENST00000238146 ZNF688P0C7X2 276 aa11.58□□□□□ -0.56
DDX55-201ENST00000238146 LGALS3P17931 250 aaKnown RBP11.58□□□□□ -0.56
DDX55-201ENST00000238146 SRD5A1P18405 259 aa11.58□□□□□ -0.56
DDX55-201ENST00000238146 VCX2Q9H322 139 aa11.58□□□□□ -0.56
DDX55-201ENST00000238146 EIF4EBP3O60516 100 aaPredicted RBP11.57□□□□□ -0.56
DDX55-201ENST00000238146 OPRPNQ99935 248 aaPredicted RBP11.57□□□□□ -0.56
DDX55-201ENST00000238146 A4D1N5 150 aa11.57□□□□□ -0.56
DDX55-201ENST00000238146 ZNF256Q9Y2P7 627 aaPredicted RBP11.57□□□□□ -0.56
DDX55-201ENST00000238146 TRBV6-5A0A0K0K1A5 114 aa11.56□□□□□ -0.56
DDX55-201ENST00000238146 LGALS9O00182 355 aa11.56□□□□□ -0.56
DDX55-201ENST00000238146 RAX2Q96IS3 184 aa11.56□□□□□ -0.56
DDX55-201ENST00000238146 ATRXP46100 2492 aa11.56□□□□□ -0.56
DDX55-201ENST00000238146 FAM74A4Q5TZK3 123 aa11.56□□□□□ -0.56
DDX55-201ENST00000238146 USMG5Q96IX5 58 aa11.56□□□□□ -0.56
DDX55-201ENST00000238146 UBTD1Q9HAC8 227 aa11.56□□□□□ -0.56
DDX55-201ENST00000238146 TRAV12-3A0A0B4J271 114 aa11.55□□□□□ -0.56
DDX55-201ENST00000238146 BRD3OSQ6XYD6 125 aa11.55□□□□□ -0.56
DDX55-201ENST00000238146 IGHV3-33P01772 117 aa11.55□□□□□ -0.56
DDX55-201ENST00000238146 TMEM223A0PJW6 202 aa11.54□□□□□ -0.56
DDX55-201ENST00000238146 SLC25A20O43772 301 aa11.54□□□□□ -0.56
DDX55-201ENST00000238146 EDN2P20800 178 aa11.54□□□□□ -0.56
DDX55-201ENST00000238146 CELSR1Q9NYQ6 3014 aa11.54□□□□□ -0.56
DDX55-201ENST00000238146 SPTAN1Q13813 2472 aaKnown RBP11.54□□□□□ -0.56
DDX55-201ENST00000238146 LEPROTO15243 131 aa11.54□□□□□ -0.56
DDX55-201ENST00000238146 PF4V1P10720 104 aa11.54□□□□□ -0.56
DDX55-201ENST00000238146 TRPT1Q86TN4 253 aaKnown RBP11.54□□□□□ -0.56
DDX55-201ENST00000238146 TMEM263Q8WUH6 116 aaKnown RBP11.54□□□□□ -0.56
DDX55-201ENST00000238146 COL6A6A6NMZ7 2263 aa11.54□□□□□ -0.56
DDX55-201ENST00000238146 C9JAW5 83 aa11.53□□□□□ -0.56
DDX55-201ENST00000238146 DAZ1Q9NQZ3 744 aaKnown RBP11.53□□□□□ -0.56
DDX55-201ENST00000238146 MUC6Q6W4X9 2439 aa11.53□□□□□ -0.56
DDX55-201ENST00000238146 M0QY20 66 aa11.53□□□□□ -0.56
DDX55-201ENST00000238146 IGHV1-69P01742 117 aa11.53□□□□□ -0.56
DDX55-201ENST00000238146 LY6EQ16553 131 aa11.53□□□□□ -0.56
DDX55-201ENST00000238146 TRAV2A0A0B4J234 112 aa11.53□□□□□ -0.56
DDX55-201ENST00000238146 BRI3O95415 125 aa11.53□□□□□ -0.56
DDX55-201ENST00000238146 IGHG2P01859 326 aa11.53□□□□□ -0.56
DDX55-201ENST00000238146 P0DMU3 169 aa11.53□□□□□ -0.56
DDX55-201ENST00000238146 FAM231AP0DMU4 169 aa11.53□□□□□ -0.56
DDX55-201ENST00000238146 FAM231CP0DMU5 169 aa11.53□□□□□ -0.56
DDX55-201ENST00000238146 IGHV3-64A0A075B6Q5 118 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 H3BUA1 57 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 NSUN5P1Q3KNT7 163 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 MUSTN1Q8IVN3 82 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 DCANP1Q8TF63 244 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 C9orf85Q96MD7 179 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 MDFICQ9P1T7 246 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 ERG28Q9UKR5 140 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 IGHV3-16A0A0C4DH30 117 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 TMEM262E9PQX1 116 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 H7C2G1 150 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 ZNF22P17026 224 aaPredicted RBP11.52□□□□□ -0.57
DDX55-201ENST00000238146 ZNF56Q15929 161 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 RNF183Q96D59 192 aa11.52□□□□□ -0.57
DDX55-201ENST00000238146 A0A0B4J2C4 111 aa11.51□□□□□ -0.57
DDX55-201ENST00000238146 RHOHQ15669 191 aa11.51□□□□□ -0.57
DDX55-201ENST00000238146 M0QXV9 152 aa11.51□□□□□ -0.57
DDX55-201ENST00000238146 RHODO00212 210 aa11.51□□□□□ -0.57
DDX55-201ENST00000238146 ID1P41134 155 aa11.51□□□□□ -0.57
DDX55-201ENST00000238146 KLRB1Q12918 225 aa11.51□□□□□ -0.57
DDX55-201ENST00000238146 ABCA2Q9BZC7 2435 aa11.51□□□□□ -0.57
DDX55-201ENST00000238146 BLCAPP62952 87 aa11.5□□□□□ -0.57
DDX55-201ENST00000238146 ELANEP08246 267 aa11.5□□□□□ -0.57
DDX55-201ENST00000238146 C20orf203Q8NBC4 194 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms