RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 IMMP2LQ96T52 175 aa8.08□□□□□ -1.12
TNFAIP3-201ENST00000237289 OVOL2Q9BRP0 275 aa8.08□□□□□ -1.12
TNFAIP3-201ENST00000237289 TRAV9-1A0A075B6T8 112 aa8.08□□□□□ -1.12
TNFAIP3-201ENST00000237289 APCSP02743 223 aa8.08□□□□□ -1.12
TNFAIP3-201ENST00000237289 VAMP8Q9BV40 100 aa8.08□□□□□ -1.12
TNFAIP3-201ENST00000237289 TMEM242Q9NWH2 141 aa8.08□□□□□ -1.12
TNFAIP3-201ENST00000237289 HSBP1L1C9JCN9 74 aa8.07□□□□□ -1.12
TNFAIP3-201ENST00000237289 HLA-DQA1P01909 254 aa8.07□□□□□ -1.12
TNFAIP3-201ENST00000237289 Q6ZQT7 251 aa8.07□□□□□ -1.12
TNFAIP3-201ENST00000237289 OR5AL1P0C617 328 aa8.07□□□□□ -1.12
TNFAIP3-201ENST00000237289 MED14OSP0DP75 135 aa8.07□□□□□ -1.12
TNFAIP3-201ENST00000237289 Q6ZTI0 123 aa8.07□□□□□ -1.12
TNFAIP3-201ENST00000237289 TGIF2-C20orf24A0A0A6YYL0 155 aa8.07□□□□□ -1.12
TNFAIP3-201ENST00000237289 PPP1R17O96001 155 aa8.07□□□□□ -1.12
TNFAIP3-201ENST00000237289 MT-ND6P03923 174 aa8.07□□□□□ -1.12
TNFAIP3-201ENST00000237289 PMCHP20382 165 aa8.07□□□□□ -1.12
TNFAIP3-201ENST00000237289 LGALS9BQ3B8N2 356 aa8.07□□□□□ -1.12
TNFAIP3-201ENST00000237289 ATP5L2Q7Z4Y8 100 aa8.07□□□□□ -1.12
TNFAIP3-201ENST00000237289 HNRNPA3P51991 378 aaKnown RBP8.06□□□□□ -1.12
TNFAIP3-201ENST00000237289 FAM19A4Q96LR4 140 aa8.06□□□□□ -1.12
TNFAIP3-201ENST00000237289 C11orf21Q9P2W6 132 aa8.06□□□□□ -1.12
TNFAIP3-201ENST00000237289 FBN1P35555 2871 aaKnown RBP8.06□□□□□ -1.12
TNFAIP3-201ENST00000237289 PAX4O43316 350 aa8.06□□□□□ -1.12
TNFAIP3-201ENST00000237289 NUDT3O95989 172 aa8.06□□□□□ -1.12
TNFAIP3-201ENST00000237289 RPL36AP83881 106 aaKnown RBP8.06□□□□□ -1.12
TNFAIP3-201ENST00000237289 DMRTA1Q5VZB9 504 aa8.06□□□□□ -1.12
TNFAIP3-201ENST00000237289 RPL36ALQ969Q0 106 aaKnown RBP8.06□□□□□ -1.12
TNFAIP3-201ENST00000237289 KLK5Q9Y337 293 aaPredicted RBP8.06□□□□□ -1.12
TNFAIP3-201ENST00000237289 A8MTW9 85 aa8.05□□□□□ -1.12
TNFAIP3-201ENST00000237289 FCER1GP30273 86 aa8.05□□□□□ -1.12
TNFAIP3-201ENST00000237289 COX8CQ7Z4L0 72 aa8.05□□□□□ -1.12
TNFAIP3-201ENST00000237289 UBE2DNLQ8IWF7 75 aa8.05□□□□□ -1.12
TNFAIP3-201ENST00000237289 SMIM27A0A1W2PRY6 76 aa8.05□□□□□ -1.12
TNFAIP3-201ENST00000237289 EVI2AP22794 236 aa8.05□□□□□ -1.12
TNFAIP3-201ENST00000237289 PRSS3P2Q8NHM4 247 aa8.05□□□□□ -1.12
TNFAIP3-201ENST00000237289 A0A0J9YY99 117 aa8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 DAZ2Q13117 558 aaKnown RBP8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 CIDEAO60543 219 aa8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 RBMY1A1P0DJD3 496 aaKnown RBP8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 RBMY1CP0DJD4 496 aa8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 RBMY1FQ15415 496 aaKnown RBP8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 C10orf91Q5T1B1 145 aa8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 TMEM136Q6ZRR5 245 aa8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 DEFB131BA0A096LNP1 70 aa8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 OR10J3Q5JRS4 329 aa8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 RNASE8Q8TDE3 154 aaKnown RBP8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 LINC00467Q9BRT7 94 aa8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 SSBP4Q9BWG4 385 aaPredicted RBP8.04□□□□□ -1.12
TNFAIP3-201ENST00000237289 TENM1Q9UKZ4 2725 aa8.03□□□□□ -1.12
TNFAIP3-201ENST00000237289 FA2HQ7L5A8 372 aa8.03□□□□□ -1.12
TNFAIP3-201ENST00000237289 TRAV4A0A0B4J268 109 aa8.03□□□□□ -1.12
TNFAIP3-201ENST00000237289 RHOHQ15669 191 aa8.03□□□□□ -1.12
TNFAIP3-201ENST00000237289 Q6ZN92 141 aa8.03□□□□□ -1.12
TNFAIP3-201ENST00000237289 SRIP30626 198 aa8.03□□□□□ -1.12
TNFAIP3-201ENST00000237289 NANOS2P60321 138 aaKnown RBP8.03□□□□□ -1.12
TNFAIP3-201ENST00000237289 MRPL18Q9H0U6 180 aaKnown RBP8.03□□□□□ -1.12
TNFAIP3-201ENST00000237289 DKK2Q9UBU2 259 aa8.03□□□□□ -1.12
TNFAIP3-201ENST00000237289 HHLA3Q9XRX5 114 aa8.03□□□□□ -1.12
TNFAIP3-201ENST00000237289 X6R8D5 127 aa8.03□□□□□ -1.12
TNFAIP3-201ENST00000237289 TRAV10A0A0B4J240 114 aa8.02□□□□□ -1.12
TNFAIP3-201ENST00000237289 IGLL5B9A064 214 aa8.02□□□□□ -1.12
TNFAIP3-201ENST00000237289 RNASE3P12724 160 aaKnown RBP8.02□□□□□ -1.12
TNFAIP3-201ENST00000237289 DGAT2L7PQ6IED9 249 aa8.02□□□□□ -1.12
TNFAIP3-201ENST00000237289 ORMDL3Q8N138 153 aa8.02□□□□□ -1.12
TNFAIP3-201ENST00000237289 GTSF1Q8WW33 167 aa8.02□□□□□ -1.12
TNFAIP3-201ENST00000237289 PPBPP02775 128 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 KIAA1644Q3SXP7 199 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 KIR2DL4Q99706 377 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 NBEAL1Q6ZS30 2694 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 LOC389332A0A1B0GUA5 103 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 GAGE12JA6NER3 117 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 GAGE1Q13065 139 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 GAGE4Q13068 117 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 GAGE5Q13069 117 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 GAGE13Q4V321 117 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 PRELID3AQ96N28 172 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 MAP1LC3AQ9H492 121 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 ST20Q9HBF5 79 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 UBE2L6O14933 153 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 GIG44P09565 113 aaPredicted RBP8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 CTRLP40313 264 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 RASL11AQ6T310 242 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 AMN1Q8IY45 258 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 CSNK1G2-AS1Q8NCQ2 148 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 MSRB1Q9NZV6 116 aa8.02□□□□□ -1.13
TNFAIP3-201ENST00000237289 TMEM191AQ9H0A3 160 aa8.01□□□□□ -1.13
TNFAIP3-201ENST00000237289 PRO0255Q9UI72 69 aa8.01□□□□□ -1.13
TNFAIP3-201ENST00000237289 IGLC6P0CF74 106 aa8.01□□□□□ -1.13
TNFAIP3-201ENST00000237289 C9orf85Q96MD7 179 aa8.01□□□□□ -1.13
TNFAIP3-201ENST00000237289 TM2D3Q9BRN9 247 aa8.01□□□□□ -1.13
TNFAIP3-201ENST00000237289 FOXA3P55318 350 aaPredicted RBP8.01□□□□□ -1.13
TNFAIP3-201ENST00000237289 NACAE9PAV3 2078 aa8.01□□□□□ -1.13
TNFAIP3-201ENST00000237289 TMEM262E9PQX1 116 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 SNAI2O43623 268 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 AMTP48728 403 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 COLCA2A8K830 154 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 MRPL23Q16540 153 aaKnown RBP8□□□□□ -1.13
TNFAIP3-201ENST00000237289 PYY3Q5JQD4 70 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 ZNRF2Q8NHG8 242 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 RASL10AQ92737 203 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms