RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 ZNF581Q9P0T4 197 aa8.79□□□□□ -1
MSH6-201ENST00000234420 K7ERS5 55 aa8.78□□□□□ -1
MSH6-201ENST00000234420 HIGD2BQ4VC39 106 aa8.78□□□□□ -1
MSH6-201ENST00000234420 SIPA1L3O60292 1781 aaPredicted RBP8.78□□□□□ -1
MSH6-201ENST00000234420 LECT2O14960 151 aa8.78□□□□□ -1
MSH6-201ENST00000234420 ATP5G1P05496 136 aa8.78□□□□□ -1
MSH6-201ENST00000234420 PDE6HQ13956 83 aa8.78□□□□□ -1
MSH6-201ENST00000234420 IGF2-ASQ6U949 168 aa8.78□□□□□ -1
MSH6-201ENST00000234420 COL24A1Q17RW2 1714 aa8.78□□□□□ -1
MSH6-201ENST00000234420 IGHV4-30-2A0A087WSY4 118 aa8.78□□□□□ -1
MSH6-201ENST00000234420 ZFP36L1Q07352 338 aaKnown RBP8.78□□□□□ -1
MSH6-201ENST00000234420 HCFC1P51610 2035 aa8.78□□□□□ -1
MSH6-201ENST00000234420 A0A0J9YWU9 116 aa8.78□□□□□ -1
MSH6-201ENST00000234420 TMEM14BQ9NUH8 114 aa8.78□□□□□ -1
MSH6-201ENST00000234420 IGLC6P0CF74 106 aa8.78□□□□□ -1
MSH6-201ENST00000234420 TRBV10-2A0A0K0K1G8 114 aa8.77□□□□□ -1
MSH6-201ENST00000234420 ETV2O00321 342 aaPredicted RBP8.77□□□□□ -1
MSH6-201ENST00000234420 NUPR1O60356 82 aa8.77□□□□□ -1
MSH6-201ENST00000234420 AJUBAQ96IF1 538 aa8.77□□□□□ -1
MSH6-201ENST00000234420 IFI6P09912 130 aa8.77□□□□□ -1.01
MSH6-201ENST00000234420 IGHV4-38-2P0DP08 117 aa8.77□□□□□ -1.01
MSH6-201ENST00000234420 WDR86Q86TI4 376 aa8.77□□□□□ -1.01
MSH6-201ENST00000234420 IGKV2D-26A0A0A0MRZ7 120 aa8.77□□□□□ -1.01
MSH6-201ENST00000234420 SND1-IT1Q9HBX3 110 aa8.77□□□□□ -1.01
MSH6-201ENST00000234420 SPANXB1Q9NS25 103 aaPredicted RBP8.77□□□□□ -1.01
MSH6-201ENST00000234420 SMAD5-AS1Q9Y6J3 95 aa8.77□□□□□ -1.01
MSH6-201ENST00000234420 CASC2Q6XLA1 102 aa8.77□□□□□ -1.01
MSH6-201ENST00000234420 TTTY13Q9BZ97 58 aa8.77□□□□□ -1.01
MSH6-201ENST00000234420 OPRPNQ99935 248 aaPredicted RBP8.77□□□□□ -1.01
MSH6-201ENST00000234420 MRPS18CQ9Y3D5 142 aaKnown RBP8.77□□□□□ -1.01
MSH6-201ENST00000234420 IGKV1-6A0A0C4DH72 117 aa8.76□□□□□ -1.01
MSH6-201ENST00000234420 RHOHQ15669 191 aa8.76□□□□□ -1.01
MSH6-201ENST00000234420 NBASA2RRP1 2371 aa8.76□□□□□ -1.01
MSH6-201ENST00000234420 H0YGX0 51 aa8.76□□□□□ -1.01
MSH6-201ENST00000234420 TIMM17BO60830 172 aa8.76□□□□□ -1.01
MSH6-201ENST00000234420 SPART-AS1P0CW21 52 aa8.76□□□□□ -1.01
MSH6-201ENST00000234420 IGKV1-16P04430 117 aa8.76□□□□□ -1.01
MSH6-201ENST00000234420 LINC00643Q86TS7 51 aa8.76□□□□□ -1.01
MSH6-201ENST00000234420 A0A0G2JMZ2 1700 aa8.75□□□□□ -1.01
MSH6-201ENST00000234420 UBE2D3P61077 147 aa8.75□□□□□ -1.01
MSH6-201ENST00000234420 K7EN84 100 aa8.75□□□□□ -1.01
MSH6-201ENST00000234420 GGNQ86UU5 652 aa8.75□□□□□ -1.01
MSH6-201ENST00000234420 FAM231DQ6ZW35 169 aa8.75□□□□□ -1.01
MSH6-201ENST00000234420 WI2-2373I1.2A0A1W2PRP0 233 aa8.75□□□□□ -1.01
MSH6-201ENST00000234420 GATA1P15976 413 aaPredicted RBP8.75□□□□□ -1.01
MSH6-201ENST00000234420 CFPP27918 469 aa8.75□□□□□ -1.01
MSH6-201ENST00000234420 LRRC37A2A6NM11 1700 aa8.74□□□□□ -1.01
MSH6-201ENST00000234420 IGLV3-21P80748 117 aaPredicted RBP8.74□□□□□ -1.01
MSH6-201ENST00000234420 GVINP1Q7Z2Y8 2422 aa8.74□□□□□ -1.01
MSH6-201ENST00000234420 PLXNA2O75051 1894 aa8.74□□□□□ -1.01
MSH6-201ENST00000234420 LTAP01374 205 aa8.74□□□□□ -1.01
MSH6-201ENST00000234420 ATP6V0E2Q8NHE4 81 aa8.74□□□□□ -1.01
MSH6-201ENST00000234420 PYGO2Q9BRQ0 406 aa8.74□□□□□ -1.01
MSH6-201ENST00000234420 A0A087WZ39 114 aa8.73□□□□□ -1.01
MSH6-201ENST00000234420 IGHV4-30-4P0DP06 118 aa8.73□□□□□ -1.01
MSH6-201ENST00000234420 IGHV4-31P0DP07 118 aa8.73□□□□□ -1.01
MSH6-201ENST00000234420 COL4A5P29400 1685 aa8.73□□□□□ -1.01
MSH6-201ENST00000234420 PRRC2AP48634 2157 aaKnown RBP8.73□□□□□ -1.01
MSH6-201ENST00000234420 JMJD7-PLA2G4BH0Y9G9 81 aa8.73□□□□□ -1.01
MSH6-201ENST00000234420 C11orf45Q8TAV5 145 aa8.73□□□□□ -1.01
MSH6-201ENST00000234420 SORL1Q92673 2214 aa8.73□□□□□ -1.01
MSH6-201ENST00000234420 HOXB4P17483 251 aaPredicted RBP8.73□□□□□ -1.01
MSH6-201ENST00000234420 PMAIP1Q13794 54 aa8.73□□□□□ -1.01
MSH6-201ENST00000234420 VPREB3Q9UKI3 123 aa8.73□□□□□ -1.01
MSH6-201ENST00000234420 X6R8D5 127 aa8.72□□□□□ -1.01
MSH6-201ENST00000234420 NDUFB8O95169 186 aa8.72□□□□□ -1.01
MSH6-201ENST00000234420 SNURFQ9Y675 71 aa8.72□□□□□ -1.01
MSH6-201ENST00000234420 PRR15LQ9BU68 103 aa8.72□□□□□ -1.01
MSH6-201ENST00000234420 C5orf63A6NC05 138 aa8.72□□□□□ -1.01
MSH6-201ENST00000234420 VWCEQ96DN2 955 aa8.72□□□□□ -1.01
MSH6-201ENST00000234420 C17orf77Q96MU5 243 aa8.71□□□□□ -1.01
MSH6-201ENST00000234420 NOTCH4Q99466 2003 aa8.71□□□□□ -1.01
MSH6-201ENST00000234420 TEX49A0A1B0GTD5 131 aa8.71□□□□□ -1.01
MSH6-201ENST00000234420 J3QLI3 93 aa8.71□□□□□ -1.01
MSH6-201ENST00000234420 USP17L23D6RBM5 183 aa8.71□□□□□ -1.01
MSH6-201ENST00000234420 COA6Q5JTJ3 125 aaKnown RBP8.71□□□□□ -1.01
MSH6-201ENST00000234420 SCXQ7RTU7 201 aa8.71□□□□□ -1.01
MSH6-201ENST00000234420 LY6G6EA0A0G2JKS1 128 aa8.71□□□□□ -1.02
MSH6-201ENST00000234420 EML5Q05BV3 1969 aa8.71□□□□□ -1.02
MSH6-201ENST00000234420 OTOGLQ3ZCN5 2332 aa8.71□□□□□ -1.02
MSH6-201ENST00000234420 NDUFA7O95182 113 aa8.71□□□□□ -1.02
MSH6-201ENST00000234420 TCL1BO95988 128 aa8.71□□□□□ -1.02
MSH6-201ENST00000234420 LINC01545Q5VT33 79 aa8.71□□□□□ -1.02
MSH6-201ENST00000234420 SRRM5B3KS81 715 aa8.71□□□□□ -1.02
MSH6-201ENST00000234420 GNRH2O43555 120 aa8.71□□□□□ -1.02
MSH6-201ENST00000234420 H3BT86 120 aa8.7□□□□□ -1.02
MSH6-201ENST00000234420 CCDC179H3BU77 68 aa8.7□□□□□ -1.02
MSH6-201ENST00000234420 SPINK6Q6UWN8 80 aa8.7□□□□□ -1.02
MSH6-201ENST00000234420 Q8N1Y9 231 aa8.7□□□□□ -1.02
MSH6-201ENST00000234420 HHLA3Q9XRX5 114 aa8.7□□□□□ -1.02
MSH6-201ENST00000234420 IGLV3-9A0A075B6K5 115 aa8.7□□□□□ -1.02
MSH6-201ENST00000234420 K7EM74 188 aa8.7□□□□□ -1.02
MSH6-201ENST00000234420 RPL39LQ96EH5 51 aaKnown RBP8.7□□□□□ -1.02
MSH6-201ENST00000234420 KLK12Q9UKR0 248 aa8.7□□□□□ -1.02
MSH6-201ENST00000234420 LINC00694P0DN24 101 aa8.7□□□□□ -1.02
MSH6-201ENST00000234420 KIAA1549LQ6ZVL6 1849 aa8.7□□□□□ -1.02
MSH6-201ENST00000234420 MRPL36Q9P0J6 103 aaKnown RBP8.69□□□□□ -1.02
MSH6-201ENST00000234420 ENHOQ6UWT2 76 aa8.69□□□□□ -1.02
MSH6-201ENST00000234420 QRFPP83859 136 aa8.69□□□□□ -1.02
MSH6-201ENST00000234420 Q6ZS92 163 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms