RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ZNF503Q96F45 646 aa10.29□□□□□ -0.76
NEK4-201ENST00000233027 CHD3Q12873 2000 aaKnown RBP10.29□□□□□ -0.76
NEK4-201ENST00000233027 C11orf86A6NJI1 115 aa10.29□□□□□ -0.76
NEK4-201ENST00000233027 IGHG2P01859 326 aa10.29□□□□□ -0.76
NEK4-201ENST00000233027 ODF1Q14990 250 aa10.29□□□□□ -0.76
NEK4-201ENST00000233027 TRBV12-3P01733 135 aa10.28□□□□□ -0.76
NEK4-201ENST00000233027 ACYP1P07311 99 aa10.28□□□□□ -0.76
NEK4-201ENST00000233027 CTRLP40313 264 aa10.28□□□□□ -0.76
NEK4-201ENST00000233027 DAZ2Q13117 558 aaKnown RBP10.28□□□□□ -0.76
NEK4-201ENST00000233027 DAZ4Q86SG3 579 aaKnown RBP10.28□□□□□ -0.76
NEK4-201ENST00000233027 DAZ3Q9NR90 486 aaKnown RBP10.28□□□□□ -0.76
NEK4-201ENST00000233027 FAM236AA0A1B0GUQ0 79 aa10.28□□□□□ -0.76
NEK4-201ENST00000233027 FAM236BA0A1B0GV22 79 aa10.28□□□□□ -0.76
NEK4-201ENST00000233027 MSMPQ1L6U9 139 aa10.28□□□□□ -0.76
NEK4-201ENST00000233027 A0A0B4J2C4 111 aa10.28□□□□□ -0.76
NEK4-201ENST00000233027 E9PLD3 99 aa10.28□□□□□ -0.76
NEK4-201ENST00000233027 TEN1Q86WV5 123 aa10.28□□□□□ -0.76
NEK4-201ENST00000233027 FOXI1Q12951 378 aa10.28□□□□□ -0.76
NEK4-201ENST00000233027 CAMK2N2Q96S95 79 aa10.28□□□□□ -0.76
NEK4-201ENST00000233027 HIGD1BQ9P298 99 aa10.28□□□□□ -0.76
NEK4-201ENST00000233027 WNK2Q9Y3S1 2297 aa10.27□□□□□ -0.76
NEK4-201ENST00000233027 TNRC6BQ9UPQ9 1833 aaKnown RBP10.27□□□□□ -0.76
NEK4-201ENST00000233027 DYSFO75923 2080 aa10.27□□□□□ -0.76
NEK4-201ENST00000233027 COX7A2LO14548 114 aa10.27□□□□□ -0.77
NEK4-201ENST00000233027 LGALS9O00182 355 aa10.27□□□□□ -0.77
NEK4-201ENST00000233027 ADORA2A-AS1P86434 159 aa10.26□□□□□ -0.77
NEK4-201ENST00000233027 PIFOQ8TCI5 191 aa10.26□□□□□ -0.77
NEK4-201ENST00000233027 PTH2Q96A98 100 aa10.26□□□□□ -0.77
NEK4-201ENST00000233027 MDFICQ9P1T7 246 aa10.26□□□□□ -0.77
NEK4-201ENST00000233027 A0A1B0GX51 115 aa10.26□□□□□ -0.77
NEK4-201ENST00000233027 C19orf71A6NCJ1 209 aa10.26□□□□□ -0.77
NEK4-201ENST00000233027 TNRC6AQ8NDV7 1962 aaKnown RBP10.26□□□□□ -0.77
NEK4-201ENST00000233027 A0A1W2PNU3 283 aaPredicted RBP10.26□□□□□ -0.77
NEK4-201ENST00000233027 C2orf70A6NJV1 201 aa10.26□□□□□ -0.77
NEK4-201ENST00000233027 UNQ9165/PRO28630Q6UXU0 137 aa10.26□□□□□ -0.77
NEK4-201ENST00000233027 LINC00322Q6ZN03 302 aaPredicted RBP10.26□□□□□ -0.77
NEK4-201ENST00000233027 C1orf43Q9BWL3 253 aa10.26□□□□□ -0.77
NEK4-201ENST00000233027 CEMP1Q6PRD7 247 aaPredicted RBP10.25□□□□□ -0.77
NEK4-201ENST00000233027 SMIM20Q8N5G0 67 aa10.25□□□□□ -0.77
NEK4-201ENST00000233027 TP73-AS1Q9UF72 201 aa10.25□□□□□ -0.77
NEK4-201ENST00000233027 DENND4AQ7Z401 1863 aa10.25□□□□□ -0.77
NEK4-201ENST00000233027 IGKV1D-37A0A075B6S9 117 aa10.25□□□□□ -0.77
NEK4-201ENST00000233027 TMEM61Q8N0U2 210 aa10.25□□□□□ -0.77
NEK4-201ENST00000233027 ETDCA0A1B0GVM5 59 aa10.25□□□□□ -0.77
NEK4-201ENST00000233027 DEFB4AO15263 64 aa10.25□□□□□ -0.77
NEK4-201ENST00000233027 IGLV1-47P01700 117 aa10.25□□□□□ -0.77
NEK4-201ENST00000233027 G3V4G9 280 aa10.25□□□□□ -0.77
NEK4-201ENST00000233027 GDF5OSQ5U4N7 250 aa10.25□□□□□ -0.77
NEK4-201ENST00000233027 Q6ZPA2 131 aa10.25□□□□□ -0.77
NEK4-201ENST00000233027 ACACAQ13085 2346 aa10.25□□□□□ -0.77
NEK4-201ENST00000233027 TRBV7-3A0A075B6L6 115 aa10.24□□□□□ -0.77
NEK4-201ENST00000233027 DEFB113Q30KQ7 82 aa10.24□□□□□ -0.77
NEK4-201ENST00000233027 C5orf47Q569G3 176 aa10.24□□□□□ -0.77
NEK4-201ENST00000233027 DOPEY2Q9Y3R5 2298 aa10.24□□□□□ -0.77
NEK4-201ENST00000233027 RNF152Q8N8N0 203 aa10.24□□□□□ -0.77
NEK4-201ENST00000233027 ZNF80P51504 273 aaPredicted RBP10.24□□□□□ -0.77
NEK4-201ENST00000233027 TMEM258P61165 79 aa10.24□□□□□ -0.77
NEK4-201ENST00000233027 KIAA1549LQ6ZVL6 1849 aa10.24□□□□□ -0.77
NEK4-201ENST00000233027 J3QKU1 62 aa10.24□□□□□ -0.77
NEK4-201ENST00000233027 H0YGX0 51 aa10.23□□□□□ -0.77
NEK4-201ENST00000233027 LECT2O14960 151 aa10.23□□□□□ -0.77
NEK4-201ENST00000233027 SPATA12Q7Z6I5 190 aa10.23□□□□□ -0.77
NEK4-201ENST00000233027 NFE4Q86UQ8 179 aa10.23□□□□□ -0.77
NEK4-201ENST00000233027 ZNF106Q9H2Y7 1883 aaKnown RBP10.23□□□□□ -0.77
NEK4-201ENST00000233027 IGLV2-8P01709 118 aa10.23□□□□□ -0.77
NEK4-201ENST00000233027 C10orf105Q8TEF2 133 aa10.23□□□□□ -0.77
NEK4-201ENST00000233027 TRBV10-2A0A0K0K1G8 114 aa10.23□□□□□ -0.77
NEK4-201ENST00000233027 TIMM17AQ99595 171 aa10.23□□□□□ -0.77
NEK4-201ENST00000233027 HHLA3Q9XRX5 114 aa10.23□□□□□ -0.77
NEK4-201ENST00000233027 MED13Q9UHV7 2174 aa10.23□□□□□ -0.77
NEK4-201ENST00000233027 VSIG2Q96IQ7 327 aa10.22□□□□□ -0.77
NEK4-201ENST00000233027 TP53TG3Q9ULZ0 132 aa10.22□□□□□ -0.77
NEK4-201ENST00000233027 GTF3C1Q12789 2109 aa10.22□□□□□ -0.77
NEK4-201ENST00000233027 P0DMU3 169 aa10.22□□□□□ -0.77
NEK4-201ENST00000233027 FAM231AP0DMU4 169 aa10.22□□□□□ -0.77
NEK4-201ENST00000233027 FAM231CP0DMU5 169 aa10.22□□□□□ -0.77
NEK4-201ENST00000233027 ZMAT4Q9H898 229 aa10.22□□□□□ -0.77
NEK4-201ENST00000233027 PROP1O75360 226 aa10.22□□□□□ -0.77
NEK4-201ENST00000233027 PSMB8P28062 276 aa10.22□□□□□ -0.77
NEK4-201ENST00000233027 C9orf66Q5T8R8 295 aa10.22□□□□□ -0.77
NEK4-201ENST00000233027 FANCD2OSQ96PS1 177 aa10.22□□□□□ -0.77
NEK4-201ENST00000233027 FUSP35637 526 aaKnown RBP eCLIP10.22□□□□□ -0.77
NEK4-201ENST00000233027 MRPL23Q16540 153 aaKnown RBP10.21□□□□□ -0.77
NEK4-201ENST00000233027 C1orf229Q6ZS94 237 aaPredicted RBP10.21□□□□□ -0.77
NEK4-201ENST00000233027 ABCA1O95477 2261 aa10.21□□□□□ -0.77
NEK4-201ENST00000233027 BRWD1-AS2P59051 145 aa10.21□□□□□ -0.77
NEK4-201ENST00000233027 MALRD1Q5VYJ5 2156 aa10.21□□□□□ -0.78
NEK4-201ENST00000233027 TRBV6-1A0A0K0K1D8 114 aa10.21□□□□□ -0.78
NEK4-201ENST00000233027 ATP5G1P05496 136 aa10.21□□□□□ -0.78
NEK4-201ENST00000233027 MIR7-3HGQ8N6C7 128 aa10.21□□□□□ -0.78
NEK4-201ENST00000233027 A0A1B0GXF2 115 aa10.21□□□□□ -0.78
NEK4-201ENST00000233027 P0C879 139 aa10.2□□□□□ -0.78
NEK4-201ENST00000233027 TIRAPP58753 221 aa10.2□□□□□ -0.78
NEK4-201ENST00000233027 ZNF295-AS1Q8N0V1 137 aa10.2□□□□□ -0.78
NEK4-201ENST00000233027 TCL1BO95988 128 aa10.2□□□□□ -0.78
NEK4-201ENST00000233027 MED14OSP0DP75 135 aa10.2□□□□□ -0.78
NEK4-201ENST00000233027 CACNA1BQ00975 2339 aa10.2□□□□□ -0.78
NEK4-201ENST00000233027 IGHV1-58A0A0C4DH39 117 aa10.2□□□□□ -0.78
NEK4-201ENST00000233027 SPART-AS1P0CW21 52 aa10.2□□□□□ -0.78
NEK4-201ENST00000233027 ADAMTS9Q9P2N4 1935 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms