RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 PHLDA3Q9Y5J5 127 aa10.79□□□□□ -0.68
PCDHB3-201ENST00000231130 LGALS3P17931 250 aaKnown RBP10.78□□□□□ -0.68
PCDHB3-201ENST00000231130 LINC01620Q4KN68 170 aa10.78□□□□□ -0.68
PCDHB3-201ENST00000231130 A0A0J9YY99 117 aa10.78□□□□□ -0.68
PCDHB3-201ENST00000231130 PRR9Q5T870 116 aa10.78□□□□□ -0.68
PCDHB3-201ENST00000231130 VMO1Q7Z5L0 202 aa10.78□□□□□ -0.68
PCDHB3-201ENST00000231130 TMEM126AQ9H061 195 aa10.78□□□□□ -0.68
PCDHB3-201ENST00000231130 IGHV7-4-1A0A0J9YVY3 117 aa10.77□□□□□ -0.68
PCDHB3-201ENST00000231130 ATXN8Q156A1 80 aa10.77□□□□□ -0.68
PCDHB3-201ENST00000231130 IGFL3Q6UXB1 125 aa10.77□□□□□ -0.68
PCDHB3-201ENST00000231130 TRGV11A0A075B6L2 103 aa10.77□□□□□ -0.69
PCDHB3-201ENST00000231130 IGHV3OR16-10A0A075B7F0 116 aa10.77□□□□□ -0.69
PCDHB3-201ENST00000231130 IGHV7-81A0A0B4J1V7 117 aa10.77□□□□□ -0.69
PCDHB3-201ENST00000231130 F6UB75 175 aa10.77□□□□□ -0.69
PCDHB3-201ENST00000231130 SUMO2P61956 95 aaKnown RBP10.77□□□□□ -0.69
PCDHB3-201ENST00000231130 ORMDL2Q53FV1 153 aa10.77□□□□□ -0.69
PCDHB3-201ENST00000231130 C5orf47Q569G3 176 aa10.77□□□□□ -0.69
PCDHB3-201ENST00000231130 BAALCQ8WXS3 180 aa10.77□□□□□ -0.69
PCDHB3-201ENST00000231130 C11orf86A6NJI1 115 aa10.76□□□□□ -0.69
PCDHB3-201ENST00000231130 F5H697 171 aa10.76□□□□□ -0.69
PCDHB3-201ENST00000231130 ATP6V0E1O15342 81 aa10.76□□□□□ -0.69
PCDHB3-201ENST00000231130 CNFNQ9BYD5 112 aa10.76□□□□□ -0.69
PCDHB3-201ENST00000231130 NPC2P61916 151 aa10.76□□□□□ -0.69
PCDHB3-201ENST00000231130 NPBQ8NG41 125 aa10.76□□□□□ -0.69
PCDHB3-201ENST00000231130 EDA2RQ9HAV5 297 aa10.76□□□□□ -0.69
PCDHB3-201ENST00000231130 ZNF256Q9Y2P7 627 aaPredicted RBP10.76□□□□□ -0.69
PCDHB3-201ENST00000231130 MSRB2Q9Y3D2 182 aa10.76□□□□□ -0.69
PCDHB3-201ENST00000231130 GNRH2O43555 120 aa10.75□□□□□ -0.69
PCDHB3-201ENST00000231130 DUSP14O95147 198 aaKnown RBP10.75□□□□□ -0.69
PCDHB3-201ENST00000231130 ELANEP08246 267 aa10.75□□□□□ -0.69
PCDHB3-201ENST00000231130 RNASE4P34096 147 aaKnown RBP10.75□□□□□ -0.69
PCDHB3-201ENST00000231130 TMEM219Q86XT9 240 aa10.75□□□□□ -0.69
PCDHB3-201ENST00000231130 NEXN-AS1Q8NBZ9 246 aa10.75□□□□□ -0.69
PCDHB3-201ENST00000231130 METTL26Q96S19 204 aa10.75□□□□□ -0.69
PCDHB3-201ENST00000231130 PIP4P1Q86T03 277 aa10.74□□□□□ -0.69
PCDHB3-201ENST00000231130 C2CD3Q4AC94 2353 aa10.74□□□□□ -0.69
PCDHB3-201ENST00000231130 TRAV12-1A0A0B4J245 112 aa10.74□□□□□ -0.69
PCDHB3-201ENST00000231130 RPL13AP40429 203 aaKnown RBP10.74□□□□□ -0.69
PCDHB3-201ENST00000231130 SBSPONQ8IVN8 264 aa10.74□□□□□ -0.69
PCDHB3-201ENST00000231130 LINC01619G3V211 115 aa10.74□□□□□ -0.69
PCDHB3-201ENST00000231130 RPL39P62891 51 aaKnown RBP10.74□□□□□ -0.69
PCDHB3-201ENST00000231130 JPT2Q9H910 190 aa10.74□□□□□ -0.69
PCDHB3-201ENST00000231130 HRNRQ86YZ3 2850 aaPredicted RBP10.74□□□□□ -0.69
PCDHB3-201ENST00000231130 MUC6Q6W4X9 2439 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 NACAE9PAV3 2078 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 NPFFO15130 113 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 IGHV3-30P01768 117 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 IGHV3-30-5P0DP03 117 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 FAM74A4Q5TZK3 123 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 ADARB2-AS1A8MUL3 147 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 COX8CQ7Z4L0 72 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 SLC50A1Q9BRV3 221 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 A0A087WWL8 130 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 HERVK_113P63121 156 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 Q6Q795 121 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 TMEM101Q96IK0 257 aa10.73□□□□□ -0.69
PCDHB3-201ENST00000231130 TRAV12-3A0A0B4J271 114 aa10.72□□□□□ -0.69
PCDHB3-201ENST00000231130 IGHV3-11P01762 117 aa10.72□□□□□ -0.69
PCDHB3-201ENST00000231130 IGHV3-33P01772 117 aa10.72□□□□□ -0.69
PCDHB3-201ENST00000231130 ZNF22P17026 224 aaPredicted RBP10.72□□□□□ -0.69
PCDHB3-201ENST00000231130 MUSTN1Q8IVN3 82 aa10.72□□□□□ -0.69
PCDHB3-201ENST00000231130 NRGNQ92686 78 aa10.72□□□□□ -0.69
PCDHB3-201ENST00000231130 SPANXA1Q9NS26 97 aa10.72□□□□□ -0.69
PCDHB3-201ENST00000231130 ZFAND3Q9H8U3 227 aa10.72□□□□□ -0.69
PCDHB3-201ENST00000231130 TRAV8-3A0A0A6YYJ7 113 aa10.71□□□□□ -0.69
PCDHB3-201ENST00000231130 SMIM9A6NGZ8 99 aa10.71□□□□□ -0.69
PCDHB3-201ENST00000231130 LGALS9O00182 355 aa10.71□□□□□ -0.69
PCDHB3-201ENST00000231130 CEMP1Q6PRD7 247 aaPredicted RBP10.71□□□□□ -0.69
PCDHB3-201ENST00000231130 CCDC140Q96MF4 163 aa10.71□□□□□ -0.69
PCDHB3-201ENST00000231130 CLPSL1A2RUU4 121 aa10.71□□□□□ -0.69
PCDHB3-201ENST00000231130 FAM19A5Q7Z5A7 132 aaPredicted RBP10.71□□□□□ -0.69
PCDHB3-201ENST00000231130 Q8N9W7 124 aa10.71□□□□□ -0.69
PCDHB3-201ENST00000231130 LINC01587Q99440 93 aa10.71□□□□□ -0.69
PCDHB3-201ENST00000231130 TP53TG1Q9Y2A0 90 aa10.71□□□□□ -0.69
PCDHB3-201ENST00000231130 J3QQQ9 107 aa10.71□□□□□ -0.7
PCDHB3-201ENST00000231130 C20orf173Q96LM9 149 aa10.71□□□□□ -0.7
PCDHB3-201ENST00000231130 IGKV3-20P01619 116 aa10.7□□□□□ -0.7
PCDHB3-201ENST00000231130 TSPEAR-AS2P59090 65 aa10.7□□□□□ -0.7
PCDHB3-201ENST00000231130 Q8NA96 180 aa10.7□□□□□ -0.7
PCDHB3-201ENST00000231130 TOMM6Q96B49 74 aa10.7□□□□□ -0.7
PCDHB3-201ENST00000231130 MDFICQ9P1T7 246 aa10.7□□□□□ -0.7
PCDHB3-201ENST00000231130 NCOR2Q9Y618 2525 aa10.7□□□□□ -0.7
PCDHB3-201ENST00000231130 RS1O15537 224 aa10.7□□□□□ -0.7
PCDHB3-201ENST00000231130 ZFP36P26651 326 aaKnown RBP10.7□□□□□ -0.7
PCDHB3-201ENST00000231130 CLEC2BQ92478 149 aa10.7□□□□□ -0.7
PCDHB3-201ENST00000231130 DNAJC30Q96LL9 226 aa10.7□□□□□ -0.7
PCDHB3-201ENST00000231130 TRBV10-2A0A0K0K1G8 114 aa10.69□□□□□ -0.7
PCDHB3-201ENST00000231130 LINC01546A6NGU7 62 aa10.69□□□□□ -0.7
PCDHB3-201ENST00000231130 CCL21O00585 134 aa10.69□□□□□ -0.7
PCDHB3-201ENST00000231130 COX6CP09669 75 aa10.69□□□□□ -0.7
PCDHB3-201ENST00000231130 SLC25A29Q8N8R3 303 aa10.69□□□□□ -0.7
PCDHB3-201ENST00000231130 EEF1AKMT3Q96AZ1 226 aa10.69□□□□□ -0.7
PCDHB3-201ENST00000231130 OPRPNQ99935 248 aaPredicted RBP10.69□□□□□ -0.7
PCDHB3-201ENST00000231130 TRAV41A0A0B4J266 112 aa10.69□□□□□ -0.7
PCDHB3-201ENST00000231130 DPH3P1Q9H4G8 78 aa10.69□□□□□ -0.7
PCDHB3-201ENST00000231130 RBAKDNA6NC62 111 aa10.68□□□□□ -0.7
PCDHB3-201ENST00000231130 COX6B1P14854 86 aa10.68□□□□□ -0.7
PCDHB3-201ENST00000231130 NDUFA7O95182 113 aa10.68□□□□□ -0.7
PCDHB3-201ENST00000231130 TRBV12-3P01733 135 aa10.68□□□□□ -0.7
PCDHB3-201ENST00000231130 LY6G5BQ8NDX9 201 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms