RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 PFN1P07737 140 aaKnown RBP4.11□□□□□ -1.75
AFP-201ENST00000226359 GNG5P63218 68 aa4.11□□□□□ -1.75
AFP-201ENST00000226359 RPL19P84098 196 aaKnown RBP4.11□□□□□ -1.75
AFP-201ENST00000226359 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
AFP-201ENST00000226359 ZNF705AQ6ZN79 300 aaPredicted RBP4.11□□□□□ -1.75
AFP-201ENST00000226359 BAGE2Q86Y30 109 aa4.11□□□□□ -1.75
AFP-201ENST00000226359 PRSS3P2Q8NHM4 247 aa4.11□□□□□ -1.75
AFP-201ENST00000226359 IMMP2LQ96T52 175 aa4.11□□□□□ -1.75
AFP-201ENST00000226359 TRBV20OR9-2A0A075B6H5 130 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 TRBV19A0A075B6N1 114 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 TRAV10A0A0B4J240 114 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 A0A0J9YX75 114 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 ZNF705FA8MVS1 300 aaPredicted RBP4.1□□□□□ -1.75
AFP-201ENST00000226359 LY6G6CO95867 125 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 NUDT3O95989 172 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 ZNF705DP0CH99 300 aaPredicted RBP4.1□□□□□ -1.75
AFP-201ENST00000226359 ZNF705BP0CI00 300 aaPredicted RBP4.1□□□□□ -1.75
AFP-201ENST00000226359 TSPOP30536 169 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 CSN1S1P47710 185 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 NANOS2P60321 138 aaKnown RBP4.1□□□□□ -1.75
AFP-201ENST00000226359 HIST1H1AQ02539 215 aaPredicted RBP4.1□□□□□ -1.75
AFP-201ENST00000226359 OR5I1Q13606 314 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 TMEM183BQ1AE95 376 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 LYPD1Q8N2G4 141 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 OR10J6PQ8NGY7 276 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 FMC1Q96HJ9 113 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 PYGO2Q9BRQ0 406 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 OSTCQ9NRP0 149 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 ZNF586Q9NXT0 402 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 NAGKQ9UJ70 344 aa4.1□□□□□ -1.75
AFP-201ENST00000226359 ALMS1Q8TCU4 4167 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 COL7A1Q02388 2944 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 K7EN84 100 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 SOCS3O14543 225 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 DEFB4AO15263 64 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 TCRAP04437 139 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 SEC61GP60059 68 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 RRN3P1Q2M238 152 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
AFP-201ENST00000226359 EXOC3-AS1Q8N2X6 119 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 Q8NAQ8 132 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 IGF2BP2-AS1Q96M15 143 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 LINC00479Q96M42 142 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 IL36BQ9NZH7 164 aa4.09□□□□□ -1.75
AFP-201ENST00000226359 DYNC2H1Q8NCM8 4307 aaKnown RBP4.09□□□□□ -1.75
AFP-201ENST00000226359 TRAV26-1A0A087WT03 109 aa4.09□□□□□ -1.76
AFP-201ENST00000226359 SLC17A3O00476 420 aa4.09□□□□□ -1.76
AFP-201ENST00000226359 SPART-AS1P0CW21 52 aa4.09□□□□□ -1.76
AFP-201ENST00000226359 IGLC2P0DOY2 106 aa4.09□□□□□ -1.76
AFP-201ENST00000226359 HLA-DMBP28068 263 aa4.09□□□□□ -1.76
AFP-201ENST00000226359 FXYD7P58549 80 aa4.09□□□□□ -1.76
AFP-201ENST00000226359 PDE6HQ13956 83 aa4.09□□□□□ -1.76
AFP-201ENST00000226359 PSG3Q16557 428 aa4.09□□□□□ -1.76
AFP-201ENST00000226359 SAPCD1Q5SSQ6 148 aa4.09□□□□□ -1.76
AFP-201ENST00000226359 IBA57Q5T440 356 aaKnown RBP4.09□□□□□ -1.76
AFP-201ENST00000226359 GOLT1AQ6ZVE7 132 aa4.09□□□□□ -1.76
AFP-201ENST00000226359 SMIM12Q96EX1 92 aa4.09□□□□□ -1.76
AFP-201ENST00000226359 TRAV9-1A0A075B6T8 112 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 IGLL5B9A064 214 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 MRPS12O15235 138 aaKnown RBP4.08□□□□□ -1.76
AFP-201ENST00000226359 IGLV2-8P01709 118 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 PRB4P10163 310 aaPredicted RBP4.08□□□□□ -1.76
AFP-201ENST00000226359 LEPP41159 167 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 CDKN1BP46527 198 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 EMP1P54849 157 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 FAM231DQ6ZW35 169 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 PRNTQ86SH4 94 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 TMEM256Q8N2U0 113 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 OR8A1Q8NGG7 326 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 MPLKIPQ8TAP9 179 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 MIEN1Q9BRT3 115 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 RNASE7Q9H1E1 156 aaKnown RBP4.08□□□□□ -1.76
AFP-201ENST00000226359 KLF12Q9Y4X4 402 aa4.08□□□□□ -1.76
AFP-201ENST00000226359 TRBV6-1A0A0K0K1D8 114 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 TYMSP04818 313 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 GIG44P09565 113 aaPredicted RBP4.07□□□□□ -1.76
AFP-201ENST00000226359 DAD1P61803 113 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 BATFQ16520 125 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 COL5A1-AS1Q5SY13 56 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 GDF5OSQ5U4N7 250 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 RNF182Q8N6D2 247 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 TMEM75Q8N9X5 138 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 LINC01587Q99440 93 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 C20orf144Q9BQM9 153 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 PSG8Q9UQ74 426 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 TRAPPC1Q9Y5R8 145 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 V9GYV3 84 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 STARD9Q9P2P6 4700 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 DEFB131BA0A096LNP1 70 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 IGLV9-49A0A0B4J1Y8 123 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 FBLL1A6NHQ2 334 aaKnown RBP4.07□□□□□ -1.76
AFP-201ENST00000226359 F6UB75 175 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 ZNF253O75346 499 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 LTAP01374 205 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 RBMY1A1P0DJD3 496 aaKnown RBP4.07□□□□□ -1.76
AFP-201ENST00000226359 RBMY1CP0DJD4 496 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 TCL1AP56279 114 aa4.07□□□□□ -1.76
AFP-201ENST00000226359 RBMY1FQ15415 496 aaKnown RBP4.07□□□□□ -1.76
AFP-201ENST00000226359 SPINK13Q1W4C9 94 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms