RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 NPYP01303 97 aa13.21□□□□□ -0.29
CBX1-201ENST00000225603 RBMY1A1P0DJD3 496 aaKnown RBP13.21□□□□□ -0.29
CBX1-201ENST00000225603 RBMY1CP0DJD4 496 aa13.21□□□□□ -0.29
CBX1-201ENST00000225603 RBMY1FQ15415 496 aaKnown RBP13.21□□□□□ -0.29
CBX1-201ENST00000225603 ZMAT5Q9UDW3 170 aaKnown RBP13.21□□□□□ -0.29
CBX1-201ENST00000225603 TIMM8BQ9Y5J9 83 aaPredicted RBP13.21□□□□□ -0.29
CBX1-201ENST00000225603 Q8N1Y9 231 aa13.21□□□□□ -0.29
CBX1-201ENST00000225603 RPL35AP18077 110 aaKnown RBP13.2□□□□□ -0.3
CBX1-201ENST00000225603 ANXA2RQ3ZCQ2 193 aa13.2□□□□□ -0.3
CBX1-201ENST00000225603 Q6ZN92 141 aa13.2□□□□□ -0.3
CBX1-201ENST00000225603 A0A096LNJ9 63 aa13.2□□□□□ -0.3
CBX1-201ENST00000225603 PPBPP02775 128 aa13.2□□□□□ -0.3
CBX1-201ENST00000225603 KRTAP10-11P60412 298 aa13.2□□□□□ -0.3
CBX1-201ENST00000225603 NUTF2P61970 127 aaKnown RBP13.2□□□□□ -0.3
CBX1-201ENST00000225603 XCL2Q9UBD3 114 aa13.19□□□□□ -0.3
CBX1-201ENST00000225603 GIG44P09565 113 aaPredicted RBP13.19□□□□□ -0.3
CBX1-201ENST00000225603 LINC00469Q8N7U9 141 aa13.19□□□□□ -0.3
CBX1-201ENST00000225603 GNRH2O43555 120 aa13.18□□□□□ -0.3
CBX1-201ENST00000225603 HNRNPA3P51991 378 aaKnown RBP13.18□□□□□ -0.3
CBX1-201ENST00000225603 H0Y8G0 127 aa13.17□□□□□ -0.3
CBX1-201ENST00000225603 SNAI2O43623 268 aa13.17□□□□□ -0.3
CBX1-201ENST00000225603 LAMTOR2Q9Y2Q5 125 aa13.17□□□□□ -0.3
CBX1-201ENST00000225603 G3V4G9 280 aa13.17□□□□□ -0.3
CBX1-201ENST00000225603 LINC01545Q5VT33 79 aa13.17□□□□□ -0.3
CBX1-201ENST00000225603 GAS8-AS1O95177 125 aa13.16□□□□□ -0.3
CBX1-201ENST00000225603 MAP1LC3AQ9H492 121 aa13.16□□□□□ -0.3
CBX1-201ENST00000225603 ST20Q9HBF5 79 aa13.16□□□□□ -0.3
CBX1-201ENST00000225603 IGHV4-4A0A075B6R2 117 aa13.16□□□□□ -0.3
CBX1-201ENST00000225603 PRM2P04554 102 aa13.16□□□□□ -0.3
CBX1-201ENST00000225603 hDV102S1A0JD36 115 aa13.15□□□□□ -0.3
CBX1-201ENST00000225603 HBDP02042 147 aa13.15□□□□□ -0.3
CBX1-201ENST00000225603 CACNG7P62955 275 aa13.15□□□□□ -0.3
CBX1-201ENST00000225603 EGFEM1PQ0D2K5 195 aa13.15□□□□□ -0.3
CBX1-201ENST00000225603 SPRY2O43597 315 aa13.15□□□□□ -0.31
CBX1-201ENST00000225603 TNFRSF6BO95407 300 aa13.15□□□□□ -0.31
CBX1-201ENST00000225603 EVI2AP22794 236 aa13.15□□□□□ -0.31
CBX1-201ENST00000225603 BATFQ16520 125 aa13.15□□□□□ -0.31
CBX1-201ENST00000225603 FAM159AQ6UWV7 190 aa13.15□□□□□ -0.31
CBX1-201ENST00000225603 SMIM15Q7Z3B0 74 aa13.15□□□□□ -0.31
CBX1-201ENST00000225603 H3BVH4 76 aa13.14□□□□□ -0.31
CBX1-201ENST00000225603 SPANXN1Q5VSR9 72 aa13.14□□□□□ -0.31
CBX1-201ENST00000225603 LINC01546A6NGU7 62 aa13.13□□□□□ -0.31
CBX1-201ENST00000225603 PMCHL2Q9BQD1 86 aa13.13□□□□□ -0.31
CBX1-201ENST00000225603 IGHV1OR15-1A0A075B7D0 117 aa13.13□□□□□ -0.31
CBX1-201ENST00000225603 HSBP1L1C9JCN9 74 aa13.13□□□□□ -0.31
CBX1-201ENST00000225603 INSP01308 110 aa13.13□□□□□ -0.31
CBX1-201ENST00000225603 GATA1P15976 413 aaPredicted RBP13.13□□□□□ -0.31
CBX1-201ENST00000225603 C1orf158Q8N1D5 194 aa13.13□□□□□ -0.31
CBX1-201ENST00000225603 MRPS16Q9Y3D3 137 aaKnown RBP13.13□□□□□ -0.31
CBX1-201ENST00000225603 HTN1P15515 57 aa13.12□□□□□ -0.31
CBX1-201ENST00000225603 SAMD5Q5TGI4 173 aa13.12□□□□□ -0.31
CBX1-201ENST00000225603 NXT2Q9NPJ8 142 aaKnown RBP13.12□□□□□ -0.31
CBX1-201ENST00000225603 RNASE3P12724 160 aaKnown RBP13.11□□□□□ -0.31
CBX1-201ENST00000225603 LINC01587Q99440 93 aa13.11□□□□□ -0.31
CBX1-201ENST00000225603 MDFICQ9P1T7 246 aa13.11□□□□□ -0.31
CBX1-201ENST00000225603 ASIPP42127 132 aa13.11□□□□□ -0.31
CBX1-201ENST00000225603 RIPPLY3P57055 190 aa13.11□□□□□ -0.31
CBX1-201ENST00000225603 TCAPO15273 167 aa13.1□□□□□ -0.31
CBX1-201ENST00000225603 MORN3Q6PF18 240 aaPredicted RBP13.1□□□□□ -0.31
CBX1-201ENST00000225603 CSNK1G2-AS1Q8NCQ2 148 aa13.1□□□□□ -0.31
CBX1-201ENST00000225603 IGHV3OR16-12A0A075B7B8 117 aa13.09□□□□□ -0.31
CBX1-201ENST00000225603 IGHV3-16A0A0C4DH30 117 aa13.09□□□□□ -0.31
CBX1-201ENST00000225603 S100A4P26447 101 aaKnown RBP13.09□□□□□ -0.31
CBX1-201ENST00000225603 CSTL1Q9H114 145 aa13.09□□□□□ -0.31
CBX1-201ENST00000225603 LGALS9BQ3B8N2 356 aa13.09□□□□□ -0.31
CBX1-201ENST00000225603 COL5A1-AS1Q5SY13 56 aa13.09□□□□□ -0.31
CBX1-201ENST00000225603 LGALS9CQ6DKI2 356 aa13.09□□□□□ -0.31
CBX1-201ENST00000225603 NRACQ8N912 160 aa13.09□□□□□ -0.31
CBX1-201ENST00000225603 IFI27L1Q96BM0 104 aa13.09□□□□□ -0.31
CBX1-201ENST00000225603 SCRT2Q9NQ03 307 aa13.09□□□□□ -0.31
CBX1-201ENST00000225603 TRAV26-2A0A0B4J265 109 aa13.08□□□□□ -0.32
CBX1-201ENST00000225603 CBY3A6NI87 242 aa13.08□□□□□ -0.32
CBX1-201ENST00000225603 MED14OSP0DP75 135 aa13.08□□□□□ -0.32
CBX1-201ENST00000225603 Q8N8P6 123 aa13.08□□□□□ -0.32
CBX1-201ENST00000225603 NOTCH1P46531 2555 aa13.08□□□□□ -0.32
CBX1-201ENST00000225603 IGHV4-30-4P0DP06 118 aa13.08□□□□□ -0.32
CBX1-201ENST00000225603 TP73-AS1Q9UF72 201 aa13.08□□□□□ -0.32
CBX1-201ENST00000225603 GOLT1BQ9Y3E0 138 aa13.08□□□□□ -0.32
CBX1-201ENST00000225603 IGLV2-18A0A075B6J9 118 aa13.07□□□□□ -0.32
CBX1-201ENST00000225603 PRSS47A8MTI9 375 aa13.07□□□□□ -0.32
CBX1-201ENST00000225603 FCER1GP30273 86 aa13.07□□□□□ -0.32
CBX1-201ENST00000225603 TMEM208Q9BTX3 173 aa13.07□□□□□ -0.32
CBX1-201ENST00000225603 MGAM2Q2M2H8 2515 aa13.07□□□□□ -0.32
CBX1-201ENST00000225603 M0R381 172 aa13.07□□□□□ -0.32
CBX1-201ENST00000225603 AZU1P20160 251 aa13.07□□□□□ -0.32
CBX1-201ENST00000225603 SLC25A34Q6PIV7 304 aa13.07□□□□□ -0.32
CBX1-201ENST00000225603 MRAP2Q96G30 205 aa13.07□□□□□ -0.32
CBX1-201ENST00000225603 MUC4Q99102 2169 aa13.06□□□□□ -0.32
CBX1-201ENST00000225603 STPG4Q8N801 248 aa13.06□□□□□ -0.32
CBX1-201ENST00000225603 C1QTNF4Q9BXJ3 329 aa13.06□□□□□ -0.32
CBX1-201ENST00000225603 PHLDA3Q9Y5J5 127 aa13.06□□□□□ -0.32
CBX1-201ENST00000225603 C9orf85Q96MD7 179 aa13.05□□□□□ -0.32
CBX1-201ENST00000225603 LINC00467Q9BRT7 94 aa13.05□□□□□ -0.32
CBX1-201ENST00000225603 DNAH3Q8TD57 4116 aa13.05□□□□□ -0.32
CBX1-201ENST00000225603 HINT1P49773 126 aaPredicted RBP13.05□□□□□ -0.32
CBX1-201ENST00000225603 TRGV11A0A075B6L2 103 aa13.04□□□□□ -0.32
CBX1-201ENST00000225603 C18orf15Q96N68 181 aa13.04□□□□□ -0.32
CBX1-201ENST00000225603 PRB2P02812 416 aaPredicted RBP13.03□□□□□ -0.32
CBX1-201ENST00000225603 C11orf72Q8NBR9 251 aa13.03□□□□□ -0.32
CBX1-201ENST00000225603 DPH3P1Q9H4G8 78 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms