RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 APCP25054 2843 aa16.59■□□□□ 0.25
CCDC9-201ENST00000221922 TENM4Q6N022 2769 aa16.59■□□□□ 0.25
CCDC9-201ENST00000221922 GNRH2O43555 120 aa16.58■□□□□ 0.25
CCDC9-201ENST00000221922 PPP1R17O96001 155 aa16.58■□□□□ 0.25
CCDC9-201ENST00000221922 SNRPD3P62318 126 aaKnown RBP16.58■□□□□ 0.25
CCDC9-201ENST00000221922 CHTOPQ9Y3Y2 248 aaKnown RBP16.58■□□□□ 0.25
CCDC9-201ENST00000221922 K7ERJ3 54 aa16.58■□□□□ 0.24
CCDC9-201ENST00000221922 UBE2E2Q96LR5 201 aa16.58■□□□□ 0.24
CCDC9-201ENST00000221922 LINC01619G3V211 115 aa16.57■□□□□ 0.24
CCDC9-201ENST00000221922 FAM159AQ6UWV7 190 aa16.57■□□□□ 0.24
CCDC9-201ENST00000221922 Q8N2B8 174 aa16.57■□□□□ 0.24
CCDC9-201ENST00000221922 NHP2Q9NX24 153 aaKnown RBP16.57■□□□□ 0.24
CCDC9-201ENST00000221922 MGPP08493 103 aa16.56■□□□□ 0.24
CCDC9-201ENST00000221922 C2orf66Q6UXQ4 117 aa16.56■□□□□ 0.24
CCDC9-201ENST00000221922 G3V4G9 280 aa16.55■□□□□ 0.24
CCDC9-201ENST00000221922 PLA2G2AP14555 144 aa16.55■□□□□ 0.24
CCDC9-201ENST00000221922 KIF25-AS1Q9Y6Z4 181 aa16.55■□□□□ 0.24
CCDC9-201ENST00000221922 MXRA5Q9NR99 2828 aa16.55■□□□□ 0.24
CCDC9-201ENST00000221922 K7EQG2 157 aa16.55■□□□□ 0.24
CCDC9-201ENST00000221922 ZNF688P0C7X2 276 aa16.55■□□□□ 0.24
CCDC9-201ENST00000221922 SYNJ2BPP57105 145 aa16.55■□□□□ 0.24
CCDC9-201ENST00000221922 TEX29Q8N6K0 151 aa16.55■□□□□ 0.24
CCDC9-201ENST00000221922 BAALCQ8WXS3 180 aa16.55■□□□□ 0.24
CCDC9-201ENST00000221922 IGHV4OR15-8A0A075B7B6 117 aa16.54■□□□□ 0.24
CCDC9-201ENST00000221922 A0A087WW49 117 aa16.54■□□□□ 0.24
CCDC9-201ENST00000221922 E9PLD3 99 aa16.54■□□□□ 0.24
CCDC9-201ENST00000221922 LINC00315P59091 139 aa16.54■□□□□ 0.24
CCDC9-201ENST00000221922 MUC4Q99102 2169 aa16.54■□□□□ 0.24
CCDC9-201ENST00000221922 OR11H12B2RN74 326 aa16.54■□□□□ 0.24
CCDC9-201ENST00000221922 RPL32P62910 135 aaKnown RBP16.54■□□□□ 0.24
CCDC9-201ENST00000221922 OR11H1Q8NG94 326 aa16.54■□□□□ 0.24
CCDC9-201ENST00000221922 OR11H2Q8NH07 326 aa16.54■□□□□ 0.24
CCDC9-201ENST00000221922 AGRNO00468 2067 aa16.53■□□□□ 0.24
CCDC9-201ENST00000221922 TRBV7-3A0A075B6L6 115 aa16.53■□□□□ 0.24
CCDC9-201ENST00000221922 A0A0J9YX75 114 aa16.53■□□□□ 0.24
CCDC9-201ENST00000221922 MYMXA0A1B0GTQ4 84 aa16.53■□□□□ 0.24
CCDC9-201ENST00000221922 CSTL1Q9H114 145 aa16.53■□□□□ 0.24
CCDC9-201ENST00000221922 TEX15Q9BXT5 2789 aa16.52■□□□□ 0.24
CCDC9-201ENST00000221922 HOXD3P31249 432 aaPredicted RBP16.52■□□□□ 0.24
CCDC9-201ENST00000221922 IGLL5B9A064 214 aa16.52■□□□□ 0.23
CCDC9-201ENST00000221922 C12orf74Q32Q52 190 aa16.52■□□□□ 0.23
CCDC9-201ENST00000221922 HIST1H4GQ99525 98 aa16.52■□□□□ 0.23
CCDC9-201ENST00000221922 COTL1Q14019 142 aa16.51■□□□□ 0.23
CCDC9-201ENST00000221922 TMEM86BQ8N661 226 aa16.51■□□□□ 0.23
CCDC9-201ENST00000221922 WFDC11Q8NEX6 87 aa16.51■□□□□ 0.23
CCDC9-201ENST00000221922 TRAV12-3A0A0B4J271 114 aa16.5■□□□□ 0.23
CCDC9-201ENST00000221922 PRSS29PA6NIE9 313 aa16.5■□□□□ 0.23
CCDC9-201ENST00000221922 J3QKU1 62 aa16.5■□□□□ 0.23
CCDC9-201ENST00000221922 DUSP14O95147 198 aaKnown RBP16.5■□□□□ 0.23
CCDC9-201ENST00000221922 HELZ2Q9BYK8 2649 aaKnown RBP16.5■□□□□ 0.23
CCDC9-201ENST00000221922 CD7P09564 240 aa16.49■□□□□ 0.23
CCDC9-201ENST00000221922 DOPEY2Q9Y3R5 2298 aa16.49■□□□□ 0.23
CCDC9-201ENST00000221922 A0A1B0GWB2 263 aa16.49■□□□□ 0.23
CCDC9-201ENST00000221922 DUX5Q96PT3 197 aa16.48■□□□□ 0.23
CCDC9-201ENST00000221922 LINC01549A6NIU2 74 aa16.47■□□□□ 0.23
CCDC9-201ENST00000221922 FOXI2Q6ZQN5 318 aa16.47■□□□□ 0.23
CCDC9-201ENST00000221922 WFDC12Q8WWY7 111 aa16.47■□□□□ 0.23
CCDC9-201ENST00000221922 ITPR3Q14573 2671 aa16.47■□□□□ 0.23
CCDC9-201ENST00000221922 POLR2KP53803 58 aaKnown RBP16.47■□□□□ 0.23
CCDC9-201ENST00000221922 ZNF479Q96JC4 524 aa16.47■□□□□ 0.23
CCDC9-201ENST00000221922 CYSLTR1Q9Y271 337 aa16.47■□□□□ 0.23
CCDC9-201ENST00000221922 PRADC1Q9BSG0 188 aa16.46■□□□□ 0.23
CCDC9-201ENST00000221922 CRYGDP07320 174 aa16.46■□□□□ 0.22
CCDC9-201ENST00000221922 HIST2H2BCQ6DN03 193 aa16.46■□□□□ 0.22
CCDC9-201ENST00000221922 SUMO4Q6EEV6 95 aa16.45■□□□□ 0.22
CCDC9-201ENST00000221922 C9orf85Q96MD7 179 aa16.45■□□□□ 0.22
CCDC9-201ENST00000221922 IGIPA6NJ69 53 aa16.44■□□□□ 0.22
CCDC9-201ENST00000221922 TSHBP01222 138 aa16.44■□□□□ 0.22
CCDC9-201ENST00000221922 TCTEX1D4Q5JR98 221 aa16.44■□□□□ 0.22
CCDC9-201ENST00000221922 IGHV3-16A0A0C4DH30 117 aa16.44■□□□□ 0.22
CCDC9-201ENST00000221922 IGKV3-20P01619 116 aa16.44■□□□□ 0.22
CCDC9-201ENST00000221922 ZFP2Q6ZN57 461 aa16.44■□□□□ 0.22
CCDC9-201ENST00000221922 SYT8Q8NBV8 401 aa16.44■□□□□ 0.22
CCDC9-201ENST00000221922 JPT2Q9H910 190 aa16.44■□□□□ 0.22
CCDC9-201ENST00000221922 VCYO14598 125 aa16.43■□□□□ 0.22
CCDC9-201ENST00000221922 RRN3P1Q2M238 152 aa16.43■□□□□ 0.22
CCDC9-201ENST00000221922 GCN1Q92616 2671 aaKnown RBP16.43■□□□□ 0.22
CCDC9-201ENST00000221922 IGHV1OR15-1A0A075B7D0 117 aa16.42■□□□□ 0.22
CCDC9-201ENST00000221922 IGLV4-69A0A075B6H9 119 aa16.42■□□□□ 0.22
CCDC9-201ENST00000221922 TRAV12-2A0A075B6T6 113 aa16.42■□□□□ 0.22
CCDC9-201ENST00000221922 F8W1H4 67 aa16.42■□□□□ 0.22
CCDC9-201ENST00000221922 C4orf3Q8WVX3 66 aa16.42■□□□□ 0.22
CCDC9-201ENST00000221922 TP53TG1Q9Y2A0 90 aa16.42■□□□□ 0.22
CCDC9-201ENST00000221922 RIPPLY3P57055 190 aa16.41■□□□□ 0.22
CCDC9-201ENST00000221922 SPINK13Q1W4C9 94 aa16.41■□□□□ 0.22
CCDC9-201ENST00000221922 PAPPA-AS1Q5QFB9 102 aa16.41■□□□□ 0.22
CCDC9-201ENST00000221922 TMEM141Q96I45 108 aa16.41■□□□□ 0.22
CCDC9-201ENST00000221922 TRBV6-5A0A0K0K1A5 114 aa16.41■□□□□ 0.22
CCDC9-201ENST00000221922 SLURP1P55000 103 aa16.41■□□□□ 0.22
CCDC9-201ENST00000221922 PEMTQ9UBM1 199 aa16.41■□□□□ 0.22
CCDC9-201ENST00000221922 A0A087WWL8 130 aa16.4■□□□□ 0.22
CCDC9-201ENST00000221922 ZNF815PA8K554 130 aa16.4■□□□□ 0.22
CCDC9-201ENST00000221922 C18orf65Q6ZTR6 163 aa16.4■□□□□ 0.22
CCDC9-201ENST00000221922 KIR2DL4Q99706 377 aa16.4■□□□□ 0.22
CCDC9-201ENST00000221922 TRAV2A0A0B4J234 112 aa16.39■□□□□ 0.21
CCDC9-201ENST00000221922 TRBV27A0A0K0K1C4 114 aa16.39■□□□□ 0.21
CCDC9-201ENST00000221922 PMVKQ15126 192 aa16.39■□□□□ 0.21
CCDC9-201ENST00000221922 Q8N1Y9 231 aa16.39■□□□□ 0.21
CCDC9-201ENST00000221922 TIMM17AQ99595 171 aa16.39■□□□□ 0.21
CCDC9-201ENST00000221922 TEX48A0A1B0GUV7 120 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms