RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 TMEM141Q96I45 108 aa12.05□□□□□ -0.48
SF3A2-201ENST00000221494 ABCA12Q86UK0 2595 aa12.05□□□□□ -0.48
SF3A2-201ENST00000221494 IGHV4OR15-8A0A075B7B6 117 aa12.05□□□□□ -0.48
SF3A2-201ENST00000221494 A0A087WW49 117 aa12.05□□□□□ -0.48
SF3A2-201ENST00000221494 RNF223E7ERA6 249 aa12.05□□□□□ -0.48
SF3A2-201ENST00000221494 ATP6V0E1O15342 81 aa12.05□□□□□ -0.48
SF3A2-201ENST00000221494 GAGE5Q13069 117 aa12.05□□□□□ -0.48
SF3A2-201ENST00000221494 GAGE6Q13070 117 aa12.05□□□□□ -0.48
SF3A2-201ENST00000221494 SRSF9Q13242 221 aaKnown RBP eCLIP12.05□□□□□ -0.48
SF3A2-201ENST00000221494 CLEC19AQ6UXS0 136 aa12.05□□□□□ -0.48
SF3A2-201ENST00000221494 C16orf92Q96LL3 132 aa12.05□□□□□ -0.48
SF3A2-201ENST00000221494 CDIP1Q9H305 208 aa12.05□□□□□ -0.48
SF3A2-201ENST00000221494 FAM223BA6NKX1 122 aa12.04□□□□□ -0.48
SF3A2-201ENST00000221494 FAM223AQ8IWN6 122 aa12.04□□□□□ -0.48
SF3A2-201ENST00000221494 ZFAND2AQ8N6M9 145 aa12.04□□□□□ -0.48
SF3A2-201ENST00000221494 OR10J6PQ8NGY7 276 aa12.04□□□□□ -0.48
SF3A2-201ENST00000221494 IGHV3OR16-8A0A075B7F1 116 aa12.03□□□□□ -0.48
SF3A2-201ENST00000221494 IGHV3-35A0A0C4DH35 117 aa12.03□□□□□ -0.48
SF3A2-201ENST00000221494 INSL3P51460 131 aa12.03□□□□□ -0.48
SF3A2-201ENST00000221494 UBE2E1P51965 193 aa12.03□□□□□ -0.48
SF3A2-201ENST00000221494 ECSCRQ19T08 205 aa12.03□□□□□ -0.48
SF3A2-201ENST00000221494 SYT8Q8NBV8 401 aa12.03□□□□□ -0.48
SF3A2-201ENST00000221494 PHLDA3Q9Y5J5 127 aa12.03□□□□□ -0.48
SF3A2-201ENST00000221494 NAV2Q8IVL1 2488 aa12.03□□□□□ -0.48
SF3A2-201ENST00000221494 CRIP2P52943 208 aaPredicted RBP12.03□□□□□ -0.48
SF3A2-201ENST00000221494 NDUFA11Q86Y39 141 aa12.03□□□□□ -0.48
SF3A2-201ENST00000221494 FAM19A4Q96LR4 140 aa12.03□□□□□ -0.48
SF3A2-201ENST00000221494 TIMM17AQ99595 171 aa12.03□□□□□ -0.48
SF3A2-201ENST00000221494 BEX4Q9NWD9 120 aaPredicted RBP12.03□□□□□ -0.48
SF3A2-201ENST00000221494 APCP25054 2843 aa12.02□□□□□ -0.48
SF3A2-201ENST00000221494 A0A096LNT2 108 aa12.02□□□□□ -0.49
SF3A2-201ENST00000221494 A0A0J9YY99 117 aa12.02□□□□□ -0.49
SF3A2-201ENST00000221494 C11orf86A6NJI1 115 aa12.02□□□□□ -0.49
SF3A2-201ENST00000221494 TMEM262E9PQX1 116 aa12.02□□□□□ -0.49
SF3A2-201ENST00000221494 S100A4P26447 101 aaKnown RBP12.02□□□□□ -0.49
SF3A2-201ENST00000221494 ATP5G2Q06055 141 aa12.02□□□□□ -0.49
SF3A2-201ENST00000221494 DEFB113Q30KQ7 82 aa12.02□□□□□ -0.49
SF3A2-201ENST00000221494 HIST2H2BCQ6DN03 193 aa12.02□□□□□ -0.49
SF3A2-201ENST00000221494 AJUBAQ96IF1 538 aa12.02□□□□□ -0.49
SF3A2-201ENST00000221494 PMVKQ15126 192 aa12.01□□□□□ -0.49
SF3A2-201ENST00000221494 PRR9Q5T870 116 aa12.01□□□□□ -0.49
SF3A2-201ENST00000221494 IGLV4-69A0A075B6H9 119 aa12□□□□□ -0.49
SF3A2-201ENST00000221494 IGHV3-66A0A0C4DH42 116 aa12□□□□□ -0.49
SF3A2-201ENST00000221494 MSMBP08118 114 aa12□□□□□ -0.49
SF3A2-201ENST00000221494 SPINK8P0C7L1 97 aa12□□□□□ -0.49
SF3A2-201ENST00000221494 PSMB2P49721 201 aa12□□□□□ -0.49
SF3A2-201ENST00000221494 GPHB5Q86YW7 130 aa12□□□□□ -0.49
SF3A2-201ENST00000221494 LRRC75A-AS1Q8N1F1 130 aa12□□□□□ -0.49
SF3A2-201ENST00000221494 SLC25A29Q8N8R3 303 aa12□□□□□ -0.49
SF3A2-201ENST00000221494 RPL39LQ96EH5 51 aaKnown RBP12□□□□□ -0.49
SF3A2-201ENST00000221494 KLK15Q9H2R5 256 aa12□□□□□ -0.49
SF3A2-201ENST00000221494 VPREB3Q9UKI3 123 aa12□□□□□ -0.49
SF3A2-201ENST00000221494 ABCA2Q9BZC7 2435 aa12□□□□□ -0.49
SF3A2-201ENST00000221494 LOC107984156A0A0G2JMH3 177 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 IGIPA6NJ69 53 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 A8MWV9 139 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 SOCS3O14543 225 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 CRYGDP07320 174 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 Q6ZUT4 128 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 NFE4Q86UQ8 179 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 ARL17AQ8IVW1 177 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 PLEKHB2Q96CS7 222 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 DOPEY2Q9Y3R5 2298 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 ANKRD17O75179 2603 aaKnown RBP11.99□□□□□ -0.49
SF3A2-201ENST00000221494 WNK2Q9Y3S1 2297 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 NBPF19A0A087WUL8 3843 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 B4DSR2 109 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 SAA4P35542 130 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 C19orf54Q5BKX5 351 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 C14orf178Q8N769 122 aaPredicted RBP11.99□□□□□ -0.49
SF3A2-201ENST00000221494 LINC01600Q96MT4 127 aa11.99□□□□□ -0.49
SF3A2-201ENST00000221494 NDUFA4O00483 81 aa11.98□□□□□ -0.49
SF3A2-201ENST00000221494 IGHV3-30P01768 117 aa11.98□□□□□ -0.49
SF3A2-201ENST00000221494 IGHV3-30-5P0DP03 117 aa11.98□□□□□ -0.49
SF3A2-201ENST00000221494 VCYO14598 125 aa11.98□□□□□ -0.49
SF3A2-201ENST00000221494 NPFFO15130 113 aa11.98□□□□□ -0.49
SF3A2-201ENST00000221494 MGPP08493 103 aa11.98□□□□□ -0.49
SF3A2-201ENST00000221494 POLR2KP53803 58 aaKnown RBP11.98□□□□□ -0.49
SF3A2-201ENST00000221494 ANXA2RQ3ZCQ2 193 aa11.98□□□□□ -0.49
SF3A2-201ENST00000221494 C20orf173Q96LM9 149 aa11.98□□□□□ -0.49
SF3A2-201ENST00000221494 DUX5Q96PT3 197 aa11.98□□□□□ -0.49
SF3A2-201ENST00000221494 ERG28Q9UKR5 140 aa11.98□□□□□ -0.49
SF3A2-201ENST00000221494 KIF25-AS1Q9Y6Z4 181 aa11.98□□□□□ -0.49
SF3A2-201ENST00000221494 TRBV6-5A0A0K0K1A5 114 aa11.97□□□□□ -0.49
SF3A2-201ENST00000221494 ZNF688P0C7X2 276 aa11.97□□□□□ -0.49
SF3A2-201ENST00000221494 PRO1854Q9UHT4 67 aa11.97□□□□□ -0.49
SF3A2-201ENST00000221494 ZFP2Q6ZN57 461 aa11.96□□□□□ -0.49
SF3A2-201ENST00000221494 C5orf56Q8N8D9 126 aa11.96□□□□□ -0.49
SF3A2-201ENST00000221494 CARD19Q96LW7 228 aa11.96□□□□□ -0.49
SF3A2-201ENST00000221494 KIR2DL4Q99706 377 aa11.96□□□□□ -0.49
SF3A2-201ENST00000221494 GCN1Q92616 2671 aaKnown RBP11.96□□□□□ -0.49
SF3A2-201ENST00000221494 CSMD1Q96PZ7 3565 aa11.96□□□□□ -0.5
SF3A2-201ENST00000221494 DUSP14O95147 198 aaKnown RBP11.96□□□□□ -0.5
SF3A2-201ENST00000221494 RNASE3P12724 160 aaKnown RBP11.96□□□□□ -0.5
SF3A2-201ENST00000221494 Q6ZQT7 251 aa11.96□□□□□ -0.5
SF3A2-201ENST00000221494 IGHV3OR16-13A0A075B7E8 117 aa11.95□□□□□ -0.5
SF3A2-201ENST00000221494 IGHV3-74A0A0B4J1X5 117 aa11.95□□□□□ -0.5
SF3A2-201ENST00000221494 H3BUA1 57 aa11.95□□□□□ -0.5
SF3A2-201ENST00000221494 TCL1BO95988 128 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms