RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 LGALS9O00182 355 aa16.54■□□□□ 0.24
HTATSF1-201ENST00000218364 NDUFS8O00217 210 aa16.54■□□□□ 0.24
HTATSF1-201ENST00000218364 INSL3P51460 131 aa16.54■□□□□ 0.24
HTATSF1-201ENST00000218364 NBASA2RRP1 2371 aa16.53■□□□□ 0.24
HTATSF1-201ENST00000218364 TRBV27A0A0K0K1C4 114 aa16.53■□□□□ 0.24
HTATSF1-201ENST00000218364 ID1P41134 155 aa16.53■□□□□ 0.24
HTATSF1-201ENST00000218364 SMCPP49901 116 aaPredicted RBP16.53■□□□□ 0.24
HTATSF1-201ENST00000218364 SVEP1Q4LDE5 3571 aa16.53■□□□□ 0.24
HTATSF1-201ENST00000218364 EPG5Q9HCE0 2579 aa16.53■□□□□ 0.24
HTATSF1-201ENST00000218364 H3BUX3 64 aa16.53■□□□□ 0.24
HTATSF1-201ENST00000218364 IGHV4-38-2P0DP08 117 aa16.53■□□□□ 0.24
HTATSF1-201ENST00000218364 RPL39P62891 51 aaKnown RBP16.53■□□□□ 0.24
HTATSF1-201ENST00000218364 DCANP1Q8TF63 244 aa16.53■□□□□ 0.24
HTATSF1-201ENST00000218364 SDHAF1A6NFY7 115 aa16.52■□□□□ 0.23
HTATSF1-201ENST00000218364 APOMO95445 188 aa16.52■□□□□ 0.23
HTATSF1-201ENST00000218364 BLCAPP62952 87 aa16.52■□□□□ 0.23
HTATSF1-201ENST00000218364 ZNF876PQ49A33 203 aa16.52■□□□□ 0.23
HTATSF1-201ENST00000218364 NDUFA11Q86Y39 141 aa16.52■□□□□ 0.23
HTATSF1-201ENST00000218364 C1QTNF4Q9BXJ3 329 aa16.52■□□□□ 0.23
HTATSF1-201ENST00000218364 EMP1P54849 157 aa16.51■□□□□ 0.23
HTATSF1-201ENST00000218364 BBC3Q96PG8 261 aaPredicted RBP16.51■□□□□ 0.23
HTATSF1-201ENST00000218364 A0A087WWL8 130 aa16.51■□□□□ 0.23
HTATSF1-201ENST00000218364 IGHV4-61A0A0C4DH41 118 aa16.51■□□□□ 0.23
HTATSF1-201ENST00000218364 C19orf84I3L1E1 186 aa16.51■□□□□ 0.23
HTATSF1-201ENST00000218364 SRD5A1P18405 259 aa16.51■□□□□ 0.23
HTATSF1-201ENST00000218364 CFHR3Q02985 330 aa16.51■□□□□ 0.23
HTATSF1-201ENST00000218364 Q6ZS46 218 aa16.51■□□□□ 0.23
HTATSF1-201ENST00000218364 FOXI1Q12951 378 aa16.5■□□□□ 0.23
HTATSF1-201ENST00000218364 SLC25A29Q8N8R3 303 aa16.5■□□□□ 0.23
HTATSF1-201ENST00000218364 C9orf85Q96MD7 179 aa16.5■□□□□ 0.23
HTATSF1-201ENST00000218364 TSPEAR-AS2P59090 65 aa16.5■□□□□ 0.23
HTATSF1-201ENST00000218364 ZNRF2Q8NHG8 242 aa16.5■□□□□ 0.23
HTATSF1-201ENST00000218364 F5H697 171 aa16.49■□□□□ 0.23
HTATSF1-201ENST00000218364 IGHV3-30P01768 117 aa16.49■□□□□ 0.23
HTATSF1-201ENST00000218364 IGHV3-30-5P0DP03 117 aa16.49■□□□□ 0.23
HTATSF1-201ENST00000218364 LYRM7Q5U5X0 104 aa16.49■□□□□ 0.23
HTATSF1-201ENST00000218364 TRAV12-3A0A0B4J271 114 aa16.49■□□□□ 0.23
HTATSF1-201ENST00000218364 PRB1P04280 392 aa16.49■□□□□ 0.23
HTATSF1-201ENST00000218364 EDN2P20800 178 aa16.49■□□□□ 0.23
HTATSF1-201ENST00000218364 GNLYP22749 145 aa16.49■□□□□ 0.23
HTATSF1-201ENST00000218364 ODF3Q96PU9 254 aa16.49■□□□□ 0.23
HTATSF1-201ENST00000218364 AMELXQ99217 191 aa16.49■□□□□ 0.23
HTATSF1-201ENST00000218364 CIDEAO60543 219 aa16.49■□□□□ 0.23
HTATSF1-201ENST00000218364 PIMREGQ9BSJ6 248 aa16.49■□□□□ 0.23
HTATSF1-201ENST00000218364 LOC107984156A0A0G2JMH3 177 aa16.48■□□□□ 0.23
HTATSF1-201ENST00000218364 PSMB2P49721 201 aa16.48■□□□□ 0.23
HTATSF1-201ENST00000218364 ARL17AQ8IVW1 177 aa16.48■□□□□ 0.23
HTATSF1-201ENST00000218364 ASH1LQ9NR48 2969 aaKnown RBP16.48■□□□□ 0.23
HTATSF1-201ENST00000218364 IGHV3-16A0A0C4DH30 117 aa16.48■□□□□ 0.23
HTATSF1-201ENST00000218364 CLEC2AQ6UVW9 174 aa16.48■□□□□ 0.23
HTATSF1-201ENST00000218364 TMEM170BQ5T4T1 132 aa16.47■□□□□ 0.23
HTATSF1-201ENST00000218364 NFE4Q86UQ8 179 aa16.47■□□□□ 0.23
HTATSF1-201ENST00000218364 DEFB104AQ8WTQ1 72 aa16.47■□□□□ 0.23
HTATSF1-201ENST00000218364 ZFYVE26Q68DK2 2539 aa16.46■□□□□ 0.23
HTATSF1-201ENST00000218364 CFAP46Q8IYW2 2715 aa16.46■□□□□ 0.23
HTATSF1-201ENST00000218364 CFC1BP0CG36 223 aa16.46■□□□□ 0.23
HTATSF1-201ENST00000218364 CFC1P0CG37 223 aa16.46■□□□□ 0.23
HTATSF1-201ENST00000218364 NSUN5P1Q3KNT7 163 aa16.46■□□□□ 0.23
HTATSF1-201ENST00000218364 ABCA2Q9BZC7 2435 aa16.45■□□□□ 0.22
HTATSF1-201ENST00000218364 C10orf105Q8TEF2 133 aa16.45■□□□□ 0.22
HTATSF1-201ENST00000218364 WFDC12Q8WWY7 111 aa16.45■□□□□ 0.22
HTATSF1-201ENST00000218364 J3QQQ9 107 aa16.45■□□□□ 0.22
HTATSF1-201ENST00000218364 M0QY20 66 aa16.45■□□□□ 0.22
HTATSF1-201ENST00000218364 RHOHQ15669 191 aa16.45■□□□□ 0.22
HTATSF1-201ENST00000218364 ZNF580Q9UK33 172 aa16.45■□□□□ 0.22
HTATSF1-201ENST00000218364 TRBV20-1A0A075B6N2 111 aa16.44■□□□□ 0.22
HTATSF1-201ENST00000218364 SYT8Q8NBV8 401 aa16.44■□□□□ 0.22
HTATSF1-201ENST00000218364 C10orf126Q8N4M7 172 aa16.43■□□□□ 0.22
HTATSF1-201ENST00000218364 SFTA2Q6UW10 78 aa16.43■□□□□ 0.22
HTATSF1-201ENST00000218364 SBSPONQ8IVN8 264 aa16.43■□□□□ 0.22
HTATSF1-201ENST00000218364 MDFICQ9P1T7 246 aa16.43■□□□□ 0.22
HTATSF1-201ENST00000218364 FAM74A4Q5TZK3 123 aa16.43■□□□□ 0.22
HTATSF1-201ENST00000218364 ZNF256Q9Y2P7 627 aaPredicted RBP16.42■□□□□ 0.22
HTATSF1-201ENST00000218364 A0A0J9YX75 114 aa16.42■□□□□ 0.22
HTATSF1-201ENST00000218364 TCL1BO95988 128 aa16.42■□□□□ 0.22
HTATSF1-201ENST00000218364 LGALS3P17931 250 aaKnown RBP16.42■□□□□ 0.22
HTATSF1-201ENST00000218364 TRPT1Q86TN4 253 aaKnown RBP16.41■□□□□ 0.22
HTATSF1-201ENST00000218364 ZNF843Q8N446 348 aa16.41■□□□□ 0.22
HTATSF1-201ENST00000218364 TMEM223A0PJW6 202 aa16.41■□□□□ 0.22
HTATSF1-201ENST00000218364 LEPROTO15243 131 aa16.41■□□□□ 0.22
HTATSF1-201ENST00000218364 CDIP1Q9H305 208 aa16.41■□□□□ 0.22
HTATSF1-201ENST00000218364 PRO1854Q9UHT4 67 aa16.41■□□□□ 0.22
HTATSF1-201ENST00000218364 P0DMU3 169 aa16.4■□□□□ 0.22
HTATSF1-201ENST00000218364 FAM231AP0DMU4 169 aa16.4■□□□□ 0.22
HTATSF1-201ENST00000218364 FAM231CP0DMU5 169 aa16.4■□□□□ 0.22
HTATSF1-201ENST00000218364 ZNF56Q15929 161 aa16.4■□□□□ 0.22
HTATSF1-201ENST00000218364 Q8N1Y9 231 aa16.4■□□□□ 0.22
HTATSF1-201ENST00000218364 PSMB8P28062 276 aa16.4■□□□□ 0.22
HTATSF1-201ENST00000218364 ZNF418Q8TF45 676 aaPredicted RBP16.4■□□□□ 0.22
HTATSF1-201ENST00000218364 ZNF688P0C7X2 276 aa16.39■□□□□ 0.21
HTATSF1-201ENST00000218364 TEN1Q86WV5 123 aa16.39■□□□□ 0.21
HTATSF1-201ENST00000218364 PPDPFLQ8WWR9 84 aa16.39■□□□□ 0.21
HTATSF1-201ENST00000218364 IGHV1OR15-1A0A075B7D0 117 aa16.38■□□□□ 0.21
HTATSF1-201ENST00000218364 C20orf203Q8NBC4 194 aa16.38■□□□□ 0.21
HTATSF1-201ENST00000218364 TRAV12-2A0A075B6T6 113 aa16.38■□□□□ 0.21
HTATSF1-201ENST00000218364 A0A1B0GV72 72 aa16.38■□□□□ 0.21
HTATSF1-201ENST00000218364 TCTEX1D4Q5JR98 221 aa16.38■□□□□ 0.21
HTATSF1-201ENST00000218364 CARD19Q96LW7 228 aa16.38■□□□□ 0.21
HTATSF1-201ENST00000218364 OPRPNQ99935 248 aaPredicted RBP16.38■□□□□ 0.21
HTATSF1-201ENST00000218364 SPTBN1Q01082 2364 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms