RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 IGHV4-4A0A075B6R2 117 aa14.22□□□□□ -0.13
RHBDD3-201ENST00000216085 HOXA5P20719 270 aa14.22□□□□□ -0.13
RHBDD3-201ENST00000216085 RHEBQ15382 184 aa14.22□□□□□ -0.13
RHBDD3-201ENST00000216085 TWIST1Q15672 202 aa14.22□□□□□ -0.13
RHBDD3-201ENST00000216085 SMIM15Q7Z3B0 74 aa14.22□□□□□ -0.13
RHBDD3-201ENST00000216085 PRO0255Q9UI72 69 aa14.22□□□□□ -0.13
RHBDD3-201ENST00000216085 HHLA3Q9XRX5 114 aa14.21□□□□□ -0.13
RHBDD3-201ENST00000216085 A0A1B0GUT8 65 aa14.2□□□□□ -0.14
RHBDD3-201ENST00000216085 SMIM27A0A1W2PRY6 76 aa14.2□□□□□ -0.14
RHBDD3-201ENST00000216085 NTF3P20783 257 aa14.2□□□□□ -0.14
RHBDD3-201ENST00000216085 FHL2Q14192 279 aa14.2□□□□□ -0.14
RHBDD3-201ENST00000216085 TMEM88Q6PEY1 159 aa14.2□□□□□ -0.14
RHBDD3-201ENST00000216085 CTDSP1Q9GZU7 261 aa14.2□□□□□ -0.14
RHBDD3-201ENST00000216085 TRAV26-1A0A087WT03 109 aa14.19□□□□□ -0.14
RHBDD3-201ENST00000216085 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.19□□□□□ -0.14
RHBDD3-201ENST00000216085 C15orf53Q8NAA6 179 aa14.19□□□□□ -0.14
RHBDD3-201ENST00000216085 A0A087WWL8 130 aa14.19□□□□□ -0.14
RHBDD3-201ENST00000216085 NUP35Q8NFH5 326 aa14.19□□□□□ -0.14
RHBDD3-201ENST00000216085 JPT2Q9H910 190 aa14.19□□□□□ -0.14
RHBDD3-201ENST00000216085 RPS10P5Q9NQ39 176 aa14.19□□□□□ -0.14
RHBDD3-201ENST00000216085 IGHV3-73A0A0B4J1V6 119 aa14.18□□□□□ -0.14
RHBDD3-201ENST00000216085 C7orf77A4D0Y5 90 aa14.18□□□□□ -0.14
RHBDD3-201ENST00000216085 H3BNG1 76 aa14.18□□□□□ -0.14
RHBDD3-201ENST00000216085 PAX4O43316 350 aa14.18□□□□□ -0.14
RHBDD3-201ENST00000216085 RIGQ13278 110 aa14.18□□□□□ -0.14
RHBDD3-201ENST00000216085 CSMD3Q7Z407 3707 aa14.18□□□□□ -0.14
RHBDD3-201ENST00000216085 CRYBA4P53673 196 aa14.17□□□□□ -0.14
RHBDD3-201ENST00000216085 C14orf178Q8N769 122 aaPredicted RBP14.17□□□□□ -0.14
RHBDD3-201ENST00000216085 A0A0J9YY99 117 aa14.17□□□□□ -0.14
RHBDD3-201ENST00000216085 TRBV6-4A0A1B0GX49 114 aa14.17□□□□□ -0.14
RHBDD3-201ENST00000216085 GATA1P15976 413 aaPredicted RBP14.17□□□□□ -0.14
RHBDD3-201ENST00000216085 RHOHQ15669 191 aa14.17□□□□□ -0.14
RHBDD3-201ENST00000216085 ZNF56Q15929 161 aa14.17□□□□□ -0.14
RHBDD3-201ENST00000216085 PRADC1Q9BSG0 188 aa14.17□□□□□ -0.14
RHBDD3-201ENST00000216085 SAMD10Q9BYL1 202 aa14.17□□□□□ -0.14
RHBDD3-201ENST00000216085 SMCO4Q9NRQ5 59 aa14.17□□□□□ -0.14
RHBDD3-201ENST00000216085 CRYGDP07320 174 aa14.16□□□□□ -0.14
RHBDD3-201ENST00000216085 MSRB1Q9NZV6 116 aa14.16□□□□□ -0.14
RHBDD3-201ENST00000216085 TMA7Q9Y2S6 64 aaKnown RBP14.16□□□□□ -0.14
RHBDD3-201ENST00000216085 KCNIP4Q6PIL6 250 aa14.15□□□□□ -0.14
RHBDD3-201ENST00000216085 DPH3P1Q9H4G8 78 aa14.15□□□□□ -0.14
RHBDD3-201ENST00000216085 LOC105371267A0A1B0GV96 52 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 A0A1B0GW15 77 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 F5H697 171 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 UFSP1Q6NVU6 142 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 CBLN2Q8IUK8 224 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 IMMP2LQ96T52 175 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 NACAE9PAV3 2078 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 A0A087WWC5 75 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 NUDT3O95989 172 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 S100A8P05109 93 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 MGPP08493 103 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 RAB4BP61018 213 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 TMEM242Q9NWH2 141 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 ICOSQ9Y6W8 199 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 TENM2Q9NT68 2774 aa14.14□□□□□ -0.15
RHBDD3-201ENST00000216085 STARD9Q9P2P6 4700 aa14.13□□□□□ -0.15
RHBDD3-201ENST00000216085 K7EQD1 137 aa14.13□□□□□ -0.15
RHBDD3-201ENST00000216085 EVI2AP22794 236 aa14.13□□□□□ -0.15
RHBDD3-201ENST00000216085 SLC25A29Q8N8R3 303 aa14.13□□□□□ -0.15
RHBDD3-201ENST00000216085 S100PP25815 95 aa14.12□□□□□ -0.15
RHBDD3-201ENST00000216085 VSIG2Q96IQ7 327 aa14.12□□□□□ -0.15
RHBDD3-201ENST00000216085 APLNQ9ULZ1 77 aa14.12□□□□□ -0.15
RHBDD3-201ENST00000216085 GYPEP15421 78 aa14.11□□□□□ -0.15
RHBDD3-201ENST00000216085 MRPL23Q16540 153 aaKnown RBP14.11□□□□□ -0.15
RHBDD3-201ENST00000216085 ATP5L2Q7Z4Y8 100 aa14.11□□□□□ -0.15
RHBDD3-201ENST00000216085 DYNC2H1Q8NCM8 4307 aaKnown RBP14.11□□□□□ -0.15
RHBDD3-201ENST00000216085 H7C1H1 209 aa14.11□□□□□ -0.15
RHBDD3-201ENST00000216085 KIF25-AS1Q9Y6Z4 181 aa14.11□□□□□ -0.15
RHBDD3-201ENST00000216085 SRIP30626 198 aa14.1□□□□□ -0.15
RHBDD3-201ENST00000216085 BTF3L4Q96K17 158 aa14.1□□□□□ -0.15
RHBDD3-201ENST00000216085 FAM3BP58499 235 aaPredicted RBP14.09□□□□□ -0.15
RHBDD3-201ENST00000216085 HBBP68871 147 aa14.09□□□□□ -0.15
RHBDD3-201ENST00000216085 MRPL54Q6P161 138 aaKnown RBP14.09□□□□□ -0.15
RHBDD3-201ENST00000216085 SH2D6Q7Z4S9 175 aa14.09□□□□□ -0.15
RHBDD3-201ENST00000216085 TMEM191AQ9H0A3 160 aa14.09□□□□□ -0.15
RHBDD3-201ENST00000216085 TRBV10-1A0A0K0K1A3 114 aa14.09□□□□□ -0.15
RHBDD3-201ENST00000216085 TRAV9-1A0A075B6T8 112 aa14.08□□□□□ -0.16
RHBDD3-201ENST00000216085 CAMPP49913 170 aa14.08□□□□□ -0.16
RHBDD3-201ENST00000216085 Q6ZSN1 163 aa14.08□□□□□ -0.16
RHBDD3-201ENST00000216085 P0DMU3 169 aa14.07□□□□□ -0.16
RHBDD3-201ENST00000216085 FAM231AP0DMU4 169 aa14.07□□□□□ -0.16
RHBDD3-201ENST00000216085 FAM231CP0DMU5 169 aa14.07□□□□□ -0.16
RHBDD3-201ENST00000216085 A0A096LPF7 62 aa14.06□□□□□ -0.16
RHBDD3-201ENST00000216085 LINC00315P59091 139 aa14.06□□□□□ -0.16
RHBDD3-201ENST00000216085 RPL36AP83881 106 aaKnown RBP14.06□□□□□ -0.16
RHBDD3-201ENST00000216085 NEGR1Q7Z3B1 354 aa14.06□□□□□ -0.16
RHBDD3-201ENST00000216085 RPL36ALQ969Q0 106 aaKnown RBP14.06□□□□□ -0.16
RHBDD3-201ENST00000216085 CCL18P55774 89 aa14.05□□□□□ -0.16
RHBDD3-201ENST00000216085 SUMO4Q6EEV6 95 aa14.05□□□□□ -0.16
RHBDD3-201ENST00000216085 FRZBQ92765 325 aa14.05□□□□□ -0.16
RHBDD3-201ENST00000216085 LOC100131303A0A0U1RQF7 123 aa14.04□□□□□ -0.16
RHBDD3-201ENST00000216085 A0A1B0GXF2 115 aa14.04□□□□□ -0.16
RHBDD3-201ENST00000216085 COLCA2A8K830 154 aa14.04□□□□□ -0.16
RHBDD3-201ENST00000216085 UBE2DNLQ8IWF7 75 aa14.04□□□□□ -0.16
RHBDD3-201ENST00000216085 GAGE12JA6NER3 117 aa14.04□□□□□ -0.16
RHBDD3-201ENST00000216085 GAGE1Q13065 139 aa14.04□□□□□ -0.16
RHBDD3-201ENST00000216085 GAGE4Q13068 117 aa14.04□□□□□ -0.16
RHBDD3-201ENST00000216085 GAGE5Q13069 117 aa14.04□□□□□ -0.16
RHBDD3-201ENST00000216085 GAGE13Q4V321 117 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms