RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 SUMO2P61956 95 aaKnown RBP11.27□□□□□ -0.61
TMEM38A-201ENST00000187762 HERVK_113P63121 156 aa11.27□□□□□ -0.61
TMEM38A-201ENST00000187762 C2orf82Q6UX34 121 aa11.27□□□□□ -0.61
TMEM38A-201ENST00000187762 TMEM101Q96IK0 257 aa11.27□□□□□ -0.61
TMEM38A-201ENST00000187762 WNK2Q9Y3S1 2297 aa11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 TRAV25A0A0B4J276 109 aa11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 C14orf178Q8N769 122 aaPredicted RBP11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 POM121L12Q8N7R1 296 aa11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 LY6G5BQ8NDX9 201 aa11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 AMELXQ99217 191 aa11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 ATRXP46100 2492 aa11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 TRGV11A0A075B6L2 103 aa11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 SPANXN1Q5VSR9 72 aa11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 SLC50A1Q9BRV3 221 aa11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 BEX4Q9NWD9 120 aaPredicted RBP11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 DPM3Q9P2X0 92 aa11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 IGF2RP11717 2491 aa11.26□□□□□ -0.61
TMEM38A-201ENST00000187762 CCL21O00585 134 aa11.25□□□□□ -0.61
TMEM38A-201ENST00000187762 RNF5Q99942 180 aa11.25□□□□□ -0.61
TMEM38A-201ENST00000187762 IGHV3-23P01764 117 aa11.25□□□□□ -0.61
TMEM38A-201ENST00000187762 DUX3Q96PT4 197 aa11.25□□□□□ -0.61
TMEM38A-201ENST00000187762 SMAD5-AS1Q9Y6J3 95 aa11.25□□□□□ -0.61
TMEM38A-201ENST00000187762 MED13LQ71F56 2210 aa11.25□□□□□ -0.61
TMEM38A-201ENST00000187762 PRAC2D3DTV9 90 aa11.24□□□□□ -0.61
TMEM38A-201ENST00000187762 PMVKQ15126 192 aa11.24□□□□□ -0.61
TMEM38A-201ENST00000187762 PAPPA-AS1Q5QFB9 102 aa11.24□□□□□ -0.61
TMEM38A-201ENST00000187762 CEMP1Q6PRD7 247 aaPredicted RBP11.24□□□□□ -0.61
TMEM38A-201ENST00000187762 IGHV4-4A0A075B6R2 117 aa11.24□□□□□ -0.61
TMEM38A-201ENST00000187762 NDPQ00604 133 aa11.24□□□□□ -0.61
TMEM38A-201ENST00000187762 UBTD1Q9HAC8 227 aa11.24□□□□□ -0.61
TMEM38A-201ENST00000187762 KLK5Q9Y337 293 aaPredicted RBP11.24□□□□□ -0.61
TMEM38A-201ENST00000187762 A0A1B0GX51 115 aa11.23□□□□□ -0.61
TMEM38A-201ENST00000187762 H7C423 109 aa11.23□□□□□ -0.61
TMEM38A-201ENST00000187762 RPL39LQ96EH5 51 aaKnown RBP11.23□□□□□ -0.61
TMEM38A-201ENST00000187762 RBAKDNA6NC62 111 aa11.23□□□□□ -0.61
TMEM38A-201ENST00000187762 UQCRQO14949 82 aa11.23□□□□□ -0.61
TMEM38A-201ENST00000187762 TRIAP1O43715 76 aa11.23□□□□□ -0.61
TMEM38A-201ENST00000187762 FANCD2OSQ96PS1 177 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 TRBV30A0A0K0K1B3 111 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 H3BT86 120 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 J3QQQ9 107 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 TSHBP01222 138 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 DEFB121Q5J5C9 76 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 MUSTN1Q8IVN3 82 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 LINC00526Q96FQ7 95 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 IMUPQ9GZP8 106 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 COL6A6A6NMZ7 2263 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 RNF223E7ERA6 249 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 F8W735 103 aaPredicted RBP11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 ADORA2A-AS1P86434 159 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 TMEM170BQ5T4T1 132 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 NPBQ8NG41 125 aa11.22□□□□□ -0.61
TMEM38A-201ENST00000187762 ODF3BA8MYP8 253 aa11.21□□□□□ -0.61
TMEM38A-201ENST00000187762 ZNF22P17026 224 aaPredicted RBP11.21□□□□□ -0.61
TMEM38A-201ENST00000187762 LGALS3P17931 250 aaKnown RBP11.21□□□□□ -0.61
TMEM38A-201ENST00000187762 FBXL19-AS1Q494R0 122 aa11.21□□□□□ -0.61
TMEM38A-201ENST00000187762 IGLV11-55A0A075B6I3 123 aa11.21□□□□□ -0.62
TMEM38A-201ENST00000187762 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.21□□□□□ -0.62
TMEM38A-201ENST00000187762 IGHV3OR16-8A0A075B7F1 116 aa11.2□□□□□ -0.62
TMEM38A-201ENST00000187762 ZFHX3Q15911 3703 aa11.2□□□□□ -0.62
TMEM38A-201ENST00000187762 EDA2RQ9HAV5 297 aa11.2□□□□□ -0.62
TMEM38A-201ENST00000187762 VMO1Q7Z5L0 202 aa11.19□□□□□ -0.62
TMEM38A-201ENST00000187762 OR13C6PQ8NH95 151 aa11.19□□□□□ -0.62
TMEM38A-201ENST00000187762 METTL26Q96S19 204 aa11.19□□□□□ -0.62
TMEM38A-201ENST00000187762 SPTBN1Q01082 2364 aaKnown RBP11.19□□□□□ -0.62
TMEM38A-201ENST00000187762 IGHV3-35A0A0C4DH35 117 aa11.19□□□□□ -0.62
TMEM38A-201ENST00000187762 MFAP4P55083 255 aa11.19□□□□□ -0.62
TMEM38A-201ENST00000187762 RNF182Q8N6D2 247 aa11.19□□□□□ -0.62
TMEM38A-201ENST00000187762 MSRB2Q9Y3D2 182 aa11.19□□□□□ -0.62
TMEM38A-201ENST00000187762 ZNRF2Q8NHG8 242 aa11.18□□□□□ -0.62
TMEM38A-201ENST00000187762 CACNA1BQ00975 2339 aa11.18□□□□□ -0.62
TMEM38A-201ENST00000187762 M0R1W7 72 aa11.18□□□□□ -0.62
TMEM38A-201ENST00000187762 C11orf71Q6IPW1 123 aa11.18□□□□□ -0.62
TMEM38A-201ENST00000187762 AGPAT4-IT1Q9H0P7 198 aa11.18□□□□□ -0.62
TMEM38A-201ENST00000187762 LINC00527Q9UJ94 153 aa11.18□□□□□ -0.62
TMEM38A-201ENST00000187762 TP53TG1Q9Y2A0 90 aa11.17□□□□□ -0.62
TMEM38A-201ENST00000187762 IGHV1-69DA0A0B4J2H0 117 aa11.17□□□□□ -0.62
TMEM38A-201ENST00000187762 IGIPA6NJ69 53 aa11.17□□□□□ -0.62
TMEM38A-201ENST00000187762 ZFP36P26651 326 aaKnown RBP11.17□□□□□ -0.62
TMEM38A-201ENST00000187762 RPS28P62857 69 aaKnown RBP11.17□□□□□ -0.62
TMEM38A-201ENST00000187762 TMEM219Q86XT9 240 aa11.17□□□□□ -0.62
TMEM38A-201ENST00000187762 TMEM223A0PJW6 202 aa11.16□□□□□ -0.62
TMEM38A-201ENST00000187762 SPANXDQ9BXN6 97 aa11.16□□□□□ -0.62
TMEM38A-201ENST00000187762 ICOSQ9Y6W8 199 aa11.16□□□□□ -0.62
TMEM38A-201ENST00000187762 M0R381 172 aa11.15□□□□□ -0.62
TMEM38A-201ENST00000187762 SPRY2O43597 315 aa11.15□□□□□ -0.62
TMEM38A-201ENST00000187762 DPH3P1Q9H4G8 78 aa11.15□□□□□ -0.62
TMEM38A-201ENST00000187762 A0A1W2PPR1 153 aa11.15□□□□□ -0.62
TMEM38A-201ENST00000187762 MGPP08493 103 aa11.15□□□□□ -0.62
TMEM38A-201ENST00000187762 Q8N6K4 173 aa11.15□□□□□ -0.62
TMEM38A-201ENST00000187762 AKAP6Q13023 2319 aa11.14□□□□□ -0.63
TMEM38A-201ENST00000187762 CTSGP08311 255 aa11.14□□□□□ -0.63
TMEM38A-201ENST00000187762 UBE2E1P51965 193 aa11.14□□□□□ -0.63
TMEM38A-201ENST00000187762 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
TMEM38A-201ENST00000187762 CLEC2BQ92478 149 aa11.14□□□□□ -0.63
TMEM38A-201ENST00000187762 IGHV7-81A0A0B4J1V7 117 aa11.14□□□□□ -0.63
TMEM38A-201ENST00000187762 LEPROTO15243 131 aa11.14□□□□□ -0.63
TMEM38A-201ENST00000187762 ATP5G1P05496 136 aa11.13□□□□□ -0.63
TMEM38A-201ENST00000187762 COX7CP15954 63 aa11.13□□□□□ -0.63
TMEM38A-201ENST00000187762 ZNF876PQ49A33 203 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms