RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 B9A039 149 aa7.65□□□□□ -1.19
CLDN18-201ENST00000183605 Q6Q795 121 aa7.65□□□□□ -1.19
CLDN18-201ENST00000183605 C9orf139Q6ZV77 190 aa7.65□□□□□ -1.19
CLDN18-201ENST00000183605 DUX5Q96PT3 197 aa7.65□□□□□ -1.19
CLDN18-201ENST00000183605 ICOSQ9Y6W8 199 aa7.65□□□□□ -1.19
CLDN18-201ENST00000183605 UBE2E1P51965 193 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 SBSPONQ8IVN8 264 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 ODF3Q96PU9 254 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.64□□□□□ -1.19
CLDN18-201ENST00000183605 COL27A1Q8IZC6 1860 aaPredicted RBP7.64□□□□□ -1.19
CLDN18-201ENST00000183605 LEPROTO15243 131 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 CD28P10747 220 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 MSRB2Q9Y3D2 182 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 A0A0B4J2C4 111 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 P0DMU3 169 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 FAM231AP0DMU4 169 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 FAM231CP0DMU5 169 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 PRR9Q5T870 116 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 VMO1Q7Z5L0 202 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 DEFB124Q8NES8 71 aa7.64□□□□□ -1.19
CLDN18-201ENST00000183605 F8W735 103 aaPredicted RBP7.63□□□□□ -1.19
CLDN18-201ENST00000183605 OVOL1O14753 267 aa7.63□□□□□ -1.19
CLDN18-201ENST00000183605 C9orf47Q6ZRZ4 202 aa7.63□□□□□ -1.19
CLDN18-201ENST00000183605 ZNRF2Q8NHG8 242 aa7.63□□□□□ -1.19
CLDN18-201ENST00000183605 TMEM263Q8WUH6 116 aaKnown RBP7.63□□□□□ -1.19
CLDN18-201ENST00000183605 SORL1Q92673 2214 aa7.63□□□□□ -1.19
CLDN18-201ENST00000183605 IGLV4-69A0A075B6H9 119 aa7.63□□□□□ -1.19
CLDN18-201ENST00000183605 A0A0G2JNJ9 132 aa7.63□□□□□ -1.19
CLDN18-201ENST00000183605 ZNF876PQ49A33 203 aa7.63□□□□□ -1.19
CLDN18-201ENST00000183605 Q9UFV3 132 aa7.63□□□□□ -1.19
CLDN18-201ENST00000183605 VPREB3Q9UKI3 123 aa7.63□□□□□ -1.19
CLDN18-201ENST00000183605 ATP6V0E1O15342 81 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 CRYGDP07320 174 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 ELANEP08246 267 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 RNASE13Q5GAN3 156 aaKnown RBP7.62□□□□□ -1.19
CLDN18-201ENST00000183605 SUMO4Q6EEV6 95 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 DGAT2L7PQ6IED9 249 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 NDUFA12Q9UI09 145 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 C2CD3Q4AC94 2353 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 RS1O15537 224 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 IGHV3-11P01762 117 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 ZNF672Q499Z4 452 aaPredicted RBP7.62□□□□□ -1.19
CLDN18-201ENST00000183605 GAGE2AQ6NT46 116 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 NPBQ8NG41 125 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 LINC01560Q8TB33 94 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 TTC28Q96AY4 2481 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.62□□□□□ -1.19
CLDN18-201ENST00000183605 H3BT86 120 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 LINC00694P0DN24 101 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 TIMM17AQ99595 171 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 TNFRSF18Q9Y5U5 241 aa7.62□□□□□ -1.19
CLDN18-201ENST00000183605 CIRBPQ14011 172 aaKnown RBP7.61□□□□□ -1.19
CLDN18-201ENST00000183605 PSMG3-AS1Q96PY0 264 aa7.61□□□□□ -1.19
CLDN18-201ENST00000183605 IGHV4-4A0A075B6R2 117 aa7.61□□□□□ -1.19
CLDN18-201ENST00000183605 IGHV7-81A0A0B4J1V7 117 aa7.61□□□□□ -1.19
CLDN18-201ENST00000183605 ZNF22P17026 224 aaPredicted RBP7.61□□□□□ -1.19
CLDN18-201ENST00000183605 PRR30Q53SZ7 412 aaPredicted RBP7.61□□□□□ -1.19
CLDN18-201ENST00000183605 OOSP1A8MZH6 123 aa7.61□□□□□ -1.19
CLDN18-201ENST00000183605 H7C423 109 aa7.61□□□□□ -1.19
CLDN18-201ENST00000183605 ZNF625Q96I27 306 aaPredicted RBP7.61□□□□□ -1.19
CLDN18-201ENST00000183605 A0A0J9YXY3 114 aa7.6□□□□□ -1.19
CLDN18-201ENST00000183605 DAND5Q8N907 189 aa7.6□□□□□ -1.19
CLDN18-201ENST00000183605 FAM110DQ8TAY7 271 aaPredicted RBP7.6□□□□□ -1.19
CLDN18-201ENST00000183605 NPFFO15130 113 aa7.6□□□□□ -1.19
CLDN18-201ENST00000183605 ZNF575Q86XF7 245 aa7.6□□□□□ -1.19
CLDN18-201ENST00000183605 IGHV3-73A0A0B4J1V6 119 aa7.6□□□□□ -1.19
CLDN18-201ENST00000183605 TRBV30A0A0K0K1B3 111 aa7.6□□□□□ -1.19
CLDN18-201ENST00000183605 IGIPA6NJ69 53 aa7.6□□□□□ -1.19
CLDN18-201ENST00000183605 TSHBP01222 138 aa7.6□□□□□ -1.19
CLDN18-201ENST00000183605 MRPL53Q96EL3 112 aaKnown RBP7.6□□□□□ -1.19
CLDN18-201ENST00000183605 TRAV41A0A0B4J266 112 aa7.59□□□□□ -1.19
CLDN18-201ENST00000183605 HERVK_113P63121 156 aa7.59□□□□□ -1.19
CLDN18-201ENST00000183605 Q6ZSV7 163 aa7.59□□□□□ -1.19
CLDN18-201ENST00000183605 OR13C6PQ8NH95 151 aa7.59□□□□□ -1.19
CLDN18-201ENST00000183605 LOC107984640A0A0U1RRK4 108 aa7.59□□□□□ -1.19
CLDN18-201ENST00000183605 LY6LH3BQJ8 138 aa7.59□□□□□ -1.19
CLDN18-201ENST00000183605 CDX4O14627 284 aaPredicted RBP7.59□□□□□ -1.19
CLDN18-201ENST00000183605 TNFRSF13BO14836 293 aaPredicted RBP7.59□□□□□ -1.19
CLDN18-201ENST00000183605 ATP5J2P56134 94 aa7.59□□□□□ -1.19
CLDN18-201ENST00000183605 ZFAND3Q9H8U3 227 aa7.59□□□□□ -1.19
CLDN18-201ENST00000183605 LENEPQ9Y5L5 61 aa7.59□□□□□ -1.19
CLDN18-201ENST00000183605 NACAE9PAV3 2078 aa7.59□□□□□ -1.2
CLDN18-201ENST00000183605 IGHV3-30-3P0DP02 117 aa7.58□□□□□ -1.2
CLDN18-201ENST00000183605 PF4V1P10720 104 aa7.58□□□□□ -1.2
CLDN18-201ENST00000183605 TMEM223A0PJW6 202 aa7.58□□□□□ -1.2
CLDN18-201ENST00000183605 J3KT08 172 aa7.58□□□□□ -1.2
CLDN18-201ENST00000183605 TMEM219Q86XT9 240 aa7.58□□□□□ -1.2
CLDN18-201ENST00000183605 ZNF580Q9UK33 172 aa7.58□□□□□ -1.2
CLDN18-201ENST00000183605 TRBV7-1A0A0A6YYK4 115 aa7.58□□□□□ -1.2
CLDN18-201ENST00000183605 ZFAND2AQ8N6M9 145 aa7.58□□□□□ -1.2
CLDN18-201ENST00000183605 LY6G5BQ8NDX9 201 aa7.58□□□□□ -1.2
CLDN18-201ENST00000183605 C20orf173Q96LM9 149 aa7.58□□□□□ -1.2
CLDN18-201ENST00000183605 KLK5Q9Y337 293 aaPredicted RBP7.58□□□□□ -1.2
CLDN18-201ENST00000183605 IGHV3OR16-10A0A075B7F0 116 aa7.57□□□□□ -1.2
CLDN18-201ENST00000183605 NDUFA7O95182 113 aa7.57□□□□□ -1.2
CLDN18-201ENST00000183605 IGFL2Q6UWQ7 119 aa7.57□□□□□ -1.2
CLDN18-201ENST00000183605 I3L3M4 83 aa7.57□□□□□ -1.2
CLDN18-201ENST00000183605 GPHB5Q86YW7 130 aa7.57□□□□□ -1.2
CLDN18-201ENST00000183605 C3orf22Q8N5N4 141 aa7.57□□□□□ -1.2
CLDN18-201ENST00000183605 MDFICQ9P1T7 246 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms