RNA–Protein interactions for RNA: ENSMUST00000068439.12

Pdlim1-201, Transcript of PDZ and LIM domain protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdlim1, Length 2,571 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1-201ENSMUST00000068439 Vmn1r78K7N608 313 aa12.45□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Lgals3P16110 264 aaKnown RBP12.45□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 VsirQ9D659 308 aa12.45□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Nubp1Q9R060 320 aa12.45□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Svep1A2AVA0 3567 aa12.45□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Ndufb11O09111 151 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 COA4Q8BT51 87 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 1810024B03RikQ8BWE1 200 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Vmn1r66Q8K4I0 310 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Ms4a4cQ9D3F6 226 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Prss1Q9Z1R9 246 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr1291-ps1A0A286YE47 326 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 AipO08915 330 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 P01790 122 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Wnt10aP70701 417 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm773Q3TML4 206 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Klhdc1Q80YG3 406 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Nit1Q8VDK1 323 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Try5Q9QUK9 246 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Try4Q9R0T7 246 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Mixl1Q9WUI0 231 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Opn3Q9WUK7 400 aa12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 AcanQ61282 2132 aaKnown RBP12.44□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Ighv5-6A0A075B5Q0 117 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr1248A0A1L1SSZ5 307 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Cd3eP22646 189 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Slc2a9Q3T9X0 538 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm9949Q8C9F4 104 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Etfrf1Q91V16 86 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Insig2Q91WG1 225 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Kcnip2Q9JJ69 270 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Col13a1Q9R1N9 751 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Utp20Q5XG71 2788 aaKnown RBP12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm4791J3QQ14 102 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr1042Q7TR81 313 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Rbfox2Q8BP71 449 aaKnown RBP12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 9030612E09RikQ8CE20 140 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 HaghQ99KB8 309 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Map1lc3bQ9CQV6 125 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Sec11cQ9D8V7 192 aa12.43□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Trav17A0A075B655 113 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm28171A0A087WQ19 227 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Zfp950A0A0U1RQ46 609 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm17660B9UIU9 90 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Mmp27D3YV89 551 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Ifna5P07349 189 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Samd5Q3V1H9 173 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr411Q7TRW8 315 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 TdhQ8K3F7 373 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr1413Q8VGU3 323 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Ctxnd1A0A1B0GST9 59 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 1700015F17RikD3YUK8 150 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Ptbp1P17225 527 aaKnown RBP12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Rom1P32958 351 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Bmp5P49003 452 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Sult2a1P52843 285 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Dynlt3P56387 116 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Loxl2P58022 776 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Defb30Q30KN4 75 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm5771Q792Y9 245 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Tmem100Q9CQG9 134 aa12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Arpc1bQ9WV32 372 aaKnown RBP12.42□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Tmem29A2ANF5 204 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm5819E9PZ96 154 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 A630076J17RikJ3QQ32 107 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 P01788 123 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm9733Q1AN91 178 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Spem1Q5F289 310 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr1434Q7TQR9 312 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Nanos1Q80WY3 267 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr1102Q8VES2 324 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr495Q8VF12 330 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Acaa1aQ921H8 424 aaKnown RBP12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Smdt1Q9DB10 107 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Eif3gQ9Z1D1 320 aaKnown RBP12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Sptbn1Q62261 2363 aaKnown RBP12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Igkv4-57A0A0A6YYE7 117 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm6904E9PVF1 202 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Cnih1O35372 144 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Csn1s2bP02664 143 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Trat1Q3UU67 187 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr323Q5NCD0 323 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Zfp459Q8BZ17 267 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr1294Q8VGE5 312 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Rab9aQ9R0M6 201 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 F5O88783 2183 aa12.41□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Vma21-psA0A140T8R2 101 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm5239D3YYZ2 122 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr913E9Q716 312 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm17455G3UW87 128 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Cldn1O88551 211 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr480Q8VEZ0 312 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr1242Q8VGM6 306 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Rnf126Q91YL2 313 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Ighv1-55A0A075B5W6 117 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 BC053393A0A0B4J1F6 192 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Olfr912A0A1L1SSS5 310 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Zfp971A2BFG8 470 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm14288E9Q9W0 88 aa12.4□□□□□ -0.42
Pdlim1-201ENSMUST00000068439 Gm20532G3UXR8 106 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms