RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 RPS10P5Q9NQ39 176 aa7.1□□□□□ -1.27
PHGDH-222ENST00000641587 TMSB15BA0A087X1C1 80 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 C7orf77A4D0Y5 90 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 TMEM189A5PLL7 270 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 H7BYZ3 331 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 PPP1R2P9O14990 202 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 RPL19P84098 196 aaKnown RBP7.09□□□□□ -1.27
PHGDH-222ENST00000641587 TNP2Q05952 138 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 RNF212Q495C1 297 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 MUC21Q5SSG8 566 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 Q6AWC8 147 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 ZNF705AQ6ZN79 300 aaPredicted RBP7.09□□□□□ -1.27
PHGDH-222ENST00000641587 COX8CQ7Z4L0 72 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 MAPKAPK5-AS1Q8N8E1 139 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 NUDT10Q8NFP7 164 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 OR2D3Q8NGH3 330 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 NUDT11Q96G61 164 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 RPP21Q9H633 154 aaKnown RBP7.09□□□□□ -1.27
PHGDH-222ENST00000641587 OSTCQ9NRP0 149 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 GOLT1BQ9Y3E0 138 aa7.09□□□□□ -1.27
PHGDH-222ENST00000641587 C19orf71A6NCJ1 209 aa7.08□□□□□ -1.28
PHGDH-222ENST00000641587 C16orf90A8MZG2 172 aa7.08□□□□□ -1.28
PHGDH-222ENST00000641587 CRXO43186 299 aaPredicted RBP7.08□□□□□ -1.28
PHGDH-222ENST00000641587 SPART-AS1P0CW21 52 aa7.08□□□□□ -1.28
PHGDH-222ENST00000641587 HTN1P15515 57 aa7.08□□□□□ -1.28
PHGDH-222ENST00000641587 CRIP1P50238 77 aa7.08□□□□□ -1.28
PHGDH-222ENST00000641587 C1orf134Q5TEV5 83 aa7.08□□□□□ -1.28
PHGDH-222ENST00000641587 FAM222AQ5U5X8 452 aa7.08□□□□□ -1.28
PHGDH-222ENST00000641587 FAM159AQ6UWV7 190 aa7.08□□□□□ -1.28
PHGDH-222ENST00000641587 Q6ZQT7 251 aa7.08□□□□□ -1.28
PHGDH-222ENST00000641587 FAM231DQ6ZW35 169 aa7.08□□□□□ -1.28
PHGDH-222ENST00000641587 ANAPC16Q96DE5 110 aa7.08□□□□□ -1.28
PHGDH-222ENST00000641587 LINC01587Q99440 93 aa7.08□□□□□ -1.28
PHGDH-222ENST00000641587 XKRY2A2RUG3 117 aa7.07□□□□□ -1.28
PHGDH-222ENST00000641587 RPS20P60866 119 aaKnown RBP7.07□□□□□ -1.28
PHGDH-222ENST00000641587 ANXA2RQ3ZCQ2 193 aa7.07□□□□□ -1.28
PHGDH-222ENST00000641587 TMEM256Q8N2U0 113 aa7.07□□□□□ -1.28
PHGDH-222ENST00000641587 C20orf144Q9BQM9 153 aa7.07□□□□□ -1.28
PHGDH-222ENST00000641587 TPPP3Q9BW30 176 aa7.07□□□□□ -1.28
PHGDH-222ENST00000641587 DKK2Q9UBU2 259 aa7.07□□□□□ -1.28
PHGDH-222ENST00000641587 V9GYV3 84 aa7.07□□□□□ -1.28
PHGDH-222ENST00000641587 IGHV1OR15-1A0A075B7D0 117 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 A0A087WWC5 75 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 GRIFINA4D1Z8 144 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 CBY3A6NI87 242 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 ZNF324O75467 553 aaPredicted RBP7.06□□□□□ -1.28
PHGDH-222ENST00000641587 GZMBP10144 247 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 S100A4P26447 101 aaKnown RBP7.06□□□□□ -1.28
PHGDH-222ENST00000641587 TCL1AP56279 114 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 LINC01559Q495D7 138 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 TMEM88Q6PEY1 159 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 ATRAIDQ6UW56 229 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 KCNS1Q96KK3 526 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 NEU1Q99519 415 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 PYGO2Q9BRQ0 406 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 CTDSP1Q9GZU7 261 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 C11orf21Q9P2W6 132 aa7.06□□□□□ -1.28
PHGDH-222ENST00000641587 TIMM8BQ9Y5J9 83 aaPredicted RBP7.06□□□□□ -1.28
PHGDH-222ENST00000641587 TRGV11A0A075B6L2 103 aa7.05□□□□□ -1.28
PHGDH-222ENST00000641587 IGKV3D-20A0A0C4DH25 116 aa7.05□□□□□ -1.28
PHGDH-222ENST00000641587 A8MWL6 223 aa7.05□□□□□ -1.28
PHGDH-222ENST00000641587 ASIPP42127 132 aa7.05□□□□□ -1.28
PHGDH-222ENST00000641587 CT83Q5H943 113 aa7.05□□□□□ -1.28
PHGDH-222ENST00000641587 C1orf158Q8N1D5 194 aa7.05□□□□□ -1.28
PHGDH-222ENST00000641587 GNRH2O43555 120 aa7.04□□□□□ -1.28
PHGDH-222ENST00000641587 CDK2AP2O75956 126 aa7.04□□□□□ -1.28
PHGDH-222ENST00000641587 TYMSP04818 313 aa7.04□□□□□ -1.28
PHGDH-222ENST00000641587 S100PP25815 95 aa7.04□□□□□ -1.28
PHGDH-222ENST00000641587 KCNIP4Q6PIL6 250 aa7.04□□□□□ -1.28
PHGDH-222ENST00000641587 TSKUQ8WUA8 353 aa7.04□□□□□ -1.28
PHGDH-222ENST00000641587 FAM210BQ96KR6 192 aa7.04□□□□□ -1.28
PHGDH-222ENST00000641587 IL36BQ9NZH7 164 aa7.04□□□□□ -1.28
PHGDH-222ENST00000641587 TP53TG3Q9ULZ0 132 aa7.04□□□□□ -1.28
PHGDH-222ENST00000641587 URGCP-MRPS24S4R325 110 aa7.04□□□□□ -1.28
PHGDH-222ENST00000641587 H3BVH4 76 aa7.03□□□□□ -1.28
PHGDH-222ENST00000641587 SCO1O75880 301 aa7.03□□□□□ -1.28
PHGDH-222ENST00000641587 PRM2P04554 102 aa7.03□□□□□ -1.28
PHGDH-222ENST00000641587 ZNF415Q09FC8 603 aa7.03□□□□□ -1.28
PHGDH-222ENST00000641587 RRN3P1Q2M238 152 aa7.03□□□□□ -1.28
PHGDH-222ENST00000641587 CBLN2Q8IUK8 224 aa7.03□□□□□ -1.28
PHGDH-222ENST00000641587 FER1L6-AS1Q8NA97 138 aa7.03□□□□□ -1.28
PHGDH-222ENST00000641587 BORCS7Q96B45 105 aa7.03□□□□□ -1.28
PHGDH-222ENST00000641587 PGLYRP4Q96LB8 373 aa7.03□□□□□ -1.28
PHGDH-222ENST00000641587 SMCO4Q9NRQ5 59 aa7.03□□□□□ -1.28
PHGDH-222ENST00000641587 IGHV3-16A0A0C4DH30 117 aa7.02□□□□□ -1.29
PHGDH-222ENST00000641587 SMIM9A6NGZ8 99 aa7.02□□□□□ -1.29
PHGDH-222ENST00000641587 HIGD1CA8MV81 97 aa7.02□□□□□ -1.29
PHGDH-222ENST00000641587 CXCL1P09341 107 aa7.02□□□□□ -1.29
PHGDH-222ENST00000641587 SSTP61278 116 aa7.02□□□□□ -1.29
PHGDH-222ENST00000641587 DAD1P61803 113 aa7.02□□□□□ -1.29
PHGDH-222ENST00000641587 TDRG1Q3Y452 100 aa7.02□□□□□ -1.29
PHGDH-222ENST00000641587 LINC00467Q9BRT7 94 aa7.02□□□□□ -1.29
PHGDH-222ENST00000641587 GFRA4Q9GZZ7 299 aa7.02□□□□□ -1.29
PHGDH-222ENST00000641587 TMEM242Q9NWH2 141 aa7.02□□□□□ -1.29
PHGDH-222ENST00000641587 NAT8BQ9UHF3 227 aa7.02□□□□□ -1.29
PHGDH-222ENST00000641587 FAT1Q14517 4588 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 MUC21A0A0G2JKD1 596 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 NBDYA0A0U1RRE5 68 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 MUC21A0A140T8X8 626 aa7.01□□□□□ -1.29
PHGDH-222ENST00000641587 TEX48A0A1B0GUV7 120 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms