RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 SYT8Q8NBV8 401 aa9.85□□□□□ -0.83
SCN8A-215ENST00000638820 TRGV11A0A075B6L2 103 aa9.84□□□□□ -0.83
SCN8A-215ENST00000638820 FAM104BQ5XKR9 115 aa9.84□□□□□ -0.83
SCN8A-215ENST00000638820 AP1S3Q96PC3 154 aa9.84□□□□□ -0.83
SCN8A-215ENST00000638820 TP53TG3Q9ULZ0 132 aa9.84□□□□□ -0.83
SCN8A-215ENST00000638820 HIST3H2BBQ8N257 126 aa9.84□□□□□ -0.83
SCN8A-215ENST00000638820 FAM19A2Q8N3H0 131 aa9.84□□□□□ -0.83
SCN8A-215ENST00000638820 ODF3Q96PU9 254 aa9.84□□□□□ -0.83
SCN8A-215ENST00000638820 PCP4L1A6NKN8 68 aa9.84□□□□□ -0.83
SCN8A-215ENST00000638820 C18orf32Q8TCD1 76 aa9.84□□□□□ -0.83
SCN8A-215ENST00000638820 ALKBH7Q9BT30 221 aaPredicted RBP9.84□□□□□ -0.83
SCN8A-215ENST00000638820 OR5AL1P0C617 328 aa9.83□□□□□ -0.84
SCN8A-215ENST00000638820 DEFB125Q8N687 156 aa9.83□□□□□ -0.84
SCN8A-215ENST00000638820 IGLL1P15814 213 aa9.83□□□□□ -0.84
SCN8A-215ENST00000638820 MDFICQ9P1T7 246 aa9.83□□□□□ -0.84
SCN8A-215ENST00000638820 PRM2P04554 102 aa9.83□□□□□ -0.84
SCN8A-215ENST00000638820 INSL3P51460 131 aa9.83□□□□□ -0.84
SCN8A-215ENST00000638820 ZNF876PQ49A33 203 aa9.83□□□□□ -0.84
SCN8A-215ENST00000638820 MCRIP2Q9BUT9 160 aaKnown RBP9.83□□□□□ -0.84
SCN8A-215ENST00000638820 TMEM191AQ9H0A3 160 aa9.83□□□□□ -0.84
SCN8A-215ENST00000638820 A0A087WWL8 130 aa9.82□□□□□ -0.84
SCN8A-215ENST00000638820 H0Y8G0 127 aa9.82□□□□□ -0.84
SCN8A-215ENST00000638820 MRPL51Q4U2R6 128 aaKnown RBP9.82□□□□□ -0.84
SCN8A-215ENST00000638820 OR10J3Q5JRS4 329 aa9.82□□□□□ -0.84
SCN8A-215ENST00000638820 DMRTA1Q5VZB9 504 aa9.82□□□□□ -0.84
SCN8A-215ENST00000638820 SCGB1D1O95968 90 aa9.82□□□□□ -0.84
SCN8A-215ENST00000638820 KRTDAPP60985 99 aa9.82□□□□□ -0.84
SCN8A-215ENST00000638820 ZNF56Q15929 161 aa9.82□□□□□ -0.84
SCN8A-215ENST00000638820 RCHY1Q96PM5 261 aa9.82□□□□□ -0.84
SCN8A-215ENST00000638820 CITED1Q99966 193 aa9.82□□□□□ -0.84
SCN8A-215ENST00000638820 HIST1H2BLQ99880 126 aa9.81□□□□□ -0.84
SCN8A-215ENST00000638820 NOTCH1P46531 2555 aa9.81□□□□□ -0.84
SCN8A-215ENST00000638820 PHOX2AO14813 284 aa9.81□□□□□ -0.84
SCN8A-215ENST00000638820 EMP1P54849 157 aa9.81□□□□□ -0.84
SCN8A-215ENST00000638820 TMEM158Q8WZ71 300 aa9.81□□□□□ -0.84
SCN8A-215ENST00000638820 GOLT1BQ9Y3E0 138 aa9.81□□□□□ -0.84
SCN8A-215ENST00000638820 TRAV26-2A0A0B4J265 109 aa9.81□□□□□ -0.84
SCN8A-215ENST00000638820 AMTNQ6UX39 209 aa9.81□□□□□ -0.84
SCN8A-215ENST00000638820 NIT1Q86X76 327 aa9.81□□□□□ -0.84
SCN8A-215ENST00000638820 OR2K2Q8NGT1 345 aa9.81□□□□□ -0.84
SCN8A-215ENST00000638820 AP5S1Q9NUS5 200 aa9.81□□□□□ -0.84
SCN8A-215ENST00000638820 AMBPP02760 352 aa9.8□□□□□ -0.84
SCN8A-215ENST00000638820 C12orf57Q99622 126 aa9.8□□□□□ -0.84
SCN8A-215ENST00000638820 C1QTNF4Q9BXJ3 329 aa9.8□□□□□ -0.84
SCN8A-215ENST00000638820 MAP1LC3AQ9H492 121 aa9.8□□□□□ -0.84
SCN8A-215ENST00000638820 GSN-AS1Q9NRJ2 163 aa9.8□□□□□ -0.84
SCN8A-215ENST00000638820 RBMY1BA6NDE4 496 aaKnown RBP9.8□□□□□ -0.84
SCN8A-215ENST00000638820 RBMY1EA6NEQ0 496 aaKnown RBP9.8□□□□□ -0.84
SCN8A-215ENST00000638820 NUPR1O60356 82 aa9.8□□□□□ -0.84
SCN8A-215ENST00000638820 ZNF324O75467 553 aaPredicted RBP9.8□□□□□ -0.84
SCN8A-215ENST00000638820 RBMY1DP0C7P1 496 aaKnown RBP9.8□□□□□ -0.84
SCN8A-215ENST00000638820 Q0VG73 95 aa9.8□□□□□ -0.84
SCN8A-215ENST00000638820 FAM19A4Q96LR4 140 aa9.8□□□□□ -0.84
SCN8A-215ENST00000638820 DPH3P1Q9H4G8 78 aa9.8□□□□□ -0.84
SCN8A-215ENST00000638820 VWFP04275 2813 aa9.8□□□□□ -0.84
SCN8A-215ENST00000638820 ZNF415Q09FC8 603 aa9.8□□□□□ -0.84
SCN8A-215ENST00000638820 PMCHL1Q16048 86 aa9.8□□□□□ -0.84
SCN8A-215ENST00000638820 NIT2Q9NQR4 276 aa9.79□□□□□ -0.84
SCN8A-215ENST00000638820 MGAM2Q2M2H8 2515 aa9.79□□□□□ -0.84
SCN8A-215ENST00000638820 IGHV3-73A0A0B4J1V6 119 aa9.79□□□□□ -0.84
SCN8A-215ENST00000638820 PPBPP02775 128 aa9.79□□□□□ -0.84
SCN8A-215ENST00000638820 LINC00614P0C842 121 aa9.79□□□□□ -0.84
SCN8A-215ENST00000638820 RNASE3P12724 160 aaKnown RBP9.79□□□□□ -0.84
SCN8A-215ENST00000638820 JPT2Q9H910 190 aa9.79□□□□□ -0.84
SCN8A-215ENST00000638820 GATA1P15976 413 aaPredicted RBP9.78□□□□□ -0.84
SCN8A-215ENST00000638820 NBEAL2Q6ZNJ1 2754 aa9.78□□□□□ -0.84
SCN8A-215ENST00000638820 RAB4AP20338 218 aa9.78□□□□□ -0.84
SCN8A-215ENST00000638820 NPYP01303 97 aa9.78□□□□□ -0.84
SCN8A-215ENST00000638820 SHISA2Q6UWI4 295 aa9.78□□□□□ -0.84
SCN8A-215ENST00000638820 SNAI2O43623 268 aa9.77□□□□□ -0.84
SCN8A-215ENST00000638820 COA6Q5JTJ3 125 aaKnown RBP9.77□□□□□ -0.84
SCN8A-215ENST00000638820 ZNF493Q6ZR52 646 aa9.77□□□□□ -0.84
SCN8A-215ENST00000638820 SPATA3Q8NHX4 192 aa9.77□□□□□ -0.84
SCN8A-215ENST00000638820 IGHV3-16A0A0C4DH30 117 aa9.77□□□□□ -0.85
SCN8A-215ENST00000638820 IFI27P40305 119 aaPredicted RBP9.77□□□□□ -0.85
SCN8A-215ENST00000638820 RRN3P1Q2M238 152 aa9.77□□□□□ -0.85
SCN8A-215ENST00000638820 OXLD1Q5BKU9 147 aa9.77□□□□□ -0.85
SCN8A-215ENST00000638820 TRPT1Q86TN4 253 aaKnown RBP9.77□□□□□ -0.85
SCN8A-215ENST00000638820 DEFB104AQ8WTQ1 72 aa9.77□□□□□ -0.85
SCN8A-215ENST00000638820 TRGV1A0A0A0MS02 117 aa9.77□□□□□ -0.85
SCN8A-215ENST00000638820 CRXO43186 299 aaPredicted RBP9.77□□□□□ -0.85
SCN8A-215ENST00000638820 TNFRSF6BO95407 300 aa9.76□□□□□ -0.85
SCN8A-215ENST00000638820 S100A12P80511 92 aa9.76□□□□□ -0.85
SCN8A-215ENST00000638820 TDRG1Q3Y452 100 aa9.76□□□□□ -0.85
SCN8A-215ENST00000638820 CNFNQ9BYD5 112 aa9.76□□□□□ -0.85
SCN8A-215ENST00000638820 RBMY1A1P0DJD3 496 aaKnown RBP9.75□□□□□ -0.85
SCN8A-215ENST00000638820 RBMY1CP0DJD4 496 aa9.75□□□□□ -0.85
SCN8A-215ENST00000638820 RBMY1FQ15415 496 aaKnown RBP9.75□□□□□ -0.85
SCN8A-215ENST00000638820 CSTL1Q9H114 145 aa9.75□□□□□ -0.85
SCN8A-215ENST00000638820 MRPL16Q9NX20 251 aaKnown RBP9.75□□□□□ -0.85
SCN8A-215ENST00000638820 MUC4Q99102 2169 aa9.75□□□□□ -0.85
SCN8A-215ENST00000638820 LEPROTL1O95214 131 aa9.75□□□□□ -0.85
SCN8A-215ENST00000638820 BEAN1Q3B7T3 259 aa9.75□□□□□ -0.85
SCN8A-215ENST00000638820 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
SCN8A-215ENST00000638820 MED14OSP0DP75 135 aa9.75□□□□□ -0.85
SCN8A-215ENST00000638820 TRGV2A0A075B6R0 118 aa9.74□□□□□ -0.85
SCN8A-215ENST00000638820 IFITM10A6NMD0 228 aa9.74□□□□□ -0.85
SCN8A-215ENST00000638820 BTF3P20290 206 aaKnown RBP9.74□□□□□ -0.85
SCN8A-215ENST00000638820 IGHV3-53P01767 116 aa9.74□□□□□ -0.85
SCN8A-215ENST00000638820 M0R2P5 195 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms