RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 Q6ZSN1 163 aa12.03□□□□□ -0.48
PNKP-230ENST00000638016 FAM213BQ8TBF2 198 aa12.03□□□□□ -0.48
PNKP-230ENST00000638016 HIST1H2BAQ96A08 127 aa12.03□□□□□ -0.48
PNKP-230ENST00000638016 ZNF471Q9BX82 626 aaPredicted RBP12.03□□□□□ -0.48
PNKP-230ENST00000638016 KRTAP4-5Q9BYR2 181 aa12.03□□□□□ -0.48
PNKP-230ENST00000638016 JPT2Q9H910 190 aa12.03□□□□□ -0.48
PNKP-230ENST00000638016 PAGE4O60829 102 aa12.02□□□□□ -0.49
PNKP-230ENST00000638016 SH2D1AO60880 128 aa12.02□□□□□ -0.49
PNKP-230ENST00000638016 TXNDC17Q9BRA2 123 aa12.02□□□□□ -0.49
PNKP-230ENST00000638016 LY96Q9Y6Y9 160 aa12.02□□□□□ -0.49
PNKP-230ENST00000638016 GRIFINA4D1Z8 144 aa12.01□□□□□ -0.49
PNKP-230ENST00000638016 FABP5P3A8MUU1 101 aa12.01□□□□□ -0.49
PNKP-230ENST00000638016 H3BVH4 76 aa12.01□□□□□ -0.49
PNKP-230ENST00000638016 BCL2L11O43521 198 aa12.01□□□□□ -0.49
PNKP-230ENST00000638016 HMSDA8MTL9 139 aa12□□□□□ -0.49
PNKP-230ENST00000638016 B4DEV8 164 aa12□□□□□ -0.49
PNKP-230ENST00000638016 SEC11BP0C7V7 166 aa12□□□□□ -0.49
PNKP-230ENST00000638016 DNAH10OSP0CZ25 163 aa12□□□□□ -0.49
PNKP-230ENST00000638016 BTF3P20290 206 aaKnown RBP12□□□□□ -0.49
PNKP-230ENST00000638016 S100A4P26447 101 aaKnown RBP12□□□□□ -0.49
PNKP-230ENST00000638016 ASIPP42127 132 aa12□□□□□ -0.49
PNKP-230ENST00000638016 SFT2D1Q8WV19 159 aa12□□□□□ -0.49
PNKP-230ENST00000638016 SAMD10Q9BYL1 202 aa12□□□□□ -0.49
PNKP-230ENST00000638016 NKX6-2Q9C056 277 aaPredicted RBP12□□□□□ -0.49
PNKP-230ENST00000638016 PARLQ9H300 379 aa12□□□□□ -0.49
PNKP-230ENST00000638016 Q9UF83 564 aa12□□□□□ -0.49
PNKP-230ENST00000638016 TMSB15BA0A087X1C1 80 aa11.99□□□□□ -0.49
PNKP-230ENST00000638016 KRBOX1C9JBD0 128 aa11.99□□□□□ -0.49
PNKP-230ENST00000638016 UBE2G1P62253 170 aa11.99□□□□□ -0.49
PNKP-230ENST00000638016 RHOHQ15669 191 aa11.99□□□□□ -0.49
PNKP-230ENST00000638016 STOML3Q8TAV4 291 aa11.99□□□□□ -0.49
PNKP-230ENST00000638016 TRBV6-4A0A1B0GX49 114 aa11.98□□□□□ -0.49
PNKP-230ENST00000638016 SCO2A0A1W2PP80 73 aa11.98□□□□□ -0.49
PNKP-230ENST00000638016 KANTRA0A1W2PQU2 76 aa11.98□□□□□ -0.49
PNKP-230ENST00000638016 AKR1C3P42330 323 aa11.98□□□□□ -0.49
PNKP-230ENST00000638016 LGALSLQ3ZCW2 172 aaPredicted RBP11.98□□□□□ -0.49
PNKP-230ENST00000638016 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
PNKP-230ENST00000638016 MBD3L1Q8WWY6 194 aa11.98□□□□□ -0.49
PNKP-230ENST00000638016 PTH2Q96A98 100 aa11.98□□□□□ -0.49
PNKP-230ENST00000638016 FMC1Q96HJ9 113 aa11.98□□□□□ -0.49
PNKP-230ENST00000638016 PRADC1Q9BSG0 188 aa11.98□□□□□ -0.49
PNKP-230ENST00000638016 A0A0D9SG52 128 aa11.97□□□□□ -0.49
PNKP-230ENST00000638016 LTAP01374 205 aa11.97□□□□□ -0.49
PNKP-230ENST00000638016 TMUB2Q71RG4 321 aa11.97□□□□□ -0.49
PNKP-230ENST00000638016 COX8CQ7Z4L0 72 aa11.97□□□□□ -0.49
PNKP-230ENST00000638016 IL36BQ9NZH7 164 aa11.97□□□□□ -0.49
PNKP-230ENST00000638016 MSRB1Q9NZV6 116 aa11.97□□□□□ -0.49
PNKP-230ENST00000638016 ZFP30Q9Y2G7 519 aa11.97□□□□□ -0.49
PNKP-230ENST00000638016 CRYGDP07320 174 aa11.96□□□□□ -0.49
PNKP-230ENST00000638016 ARMS2P0C7Q2 107 aa11.96□□□□□ -0.49
PNKP-230ENST00000638016 ZNF674Q2M3X9 581 aa11.96□□□□□ -0.49
PNKP-230ENST00000638016 FAM162BQ5T6X4 162 aa11.96□□□□□ -0.49
PNKP-230ENST00000638016 UFSP1Q6NVU6 142 aa11.96□□□□□ -0.49
PNKP-230ENST00000638016 Q8N3U1 123 aa11.96□□□□□ -0.49
PNKP-230ENST00000638016 C14orf178Q8N769 122 aaPredicted RBP11.96□□□□□ -0.49
PNKP-230ENST00000638016 TRBV6-1A0A0K0K1D8 114 aa11.95□□□□□ -0.5
PNKP-230ENST00000638016 GAGE12JA6NER3 117 aa11.95□□□□□ -0.5
PNKP-230ENST00000638016 UMAD1C9J7I0 102 aa11.95□□□□□ -0.5
PNKP-230ENST00000638016 MGST1P10620 155 aaKnown RBP11.95□□□□□ -0.5
PNKP-230ENST00000638016 EVI2AP22794 236 aa11.95□□□□□ -0.5
PNKP-230ENST00000638016 RPL19P84098 196 aaKnown RBP11.95□□□□□ -0.5
PNKP-230ENST00000638016 GAGE1Q13065 139 aa11.95□□□□□ -0.5
PNKP-230ENST00000638016 GAGE4Q13068 117 aa11.95□□□□□ -0.5
PNKP-230ENST00000638016 GAGE5Q13069 117 aa11.95□□□□□ -0.5
PNKP-230ENST00000638016 GAGE13Q4V321 117 aa11.95□□□□□ -0.5
PNKP-230ENST00000638016 IGHV3-38A0A0C4DH36 116 aa11.94□□□□□ -0.5
PNKP-230ENST00000638016 PFDN1O60925 122 aa11.94□□□□□ -0.5
PNKP-230ENST00000638016 IGHV3-30P01768 117 aa11.94□□□□□ -0.5
PNKP-230ENST00000638016 IGHV3-33P01772 117 aa11.94□□□□□ -0.5
PNKP-230ENST00000638016 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
PNKP-230ENST00000638016 IGHV3-30-5P0DP03 117 aa11.94□□□□□ -0.5
PNKP-230ENST00000638016 TIRAPP58753 221 aa11.94□□□□□ -0.5
PNKP-230ENST00000638016 CCL20P78556 96 aa11.94□□□□□ -0.5
PNKP-230ENST00000638016 LINC01559Q495D7 138 aa11.94□□□□□ -0.5
PNKP-230ENST00000638016 OR10J3Q5JRS4 329 aa11.94□□□□□ -0.5
PNKP-230ENST00000638016 SH2D6Q7Z4S9 175 aa11.94□□□□□ -0.5
PNKP-230ENST00000638016 TRAV9-2A0A087WT02 112 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 A0A087WWL8 130 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 A8MWV9 139 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 M0R381 172 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 CIDEAO60543 219 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 CDK2AP2O75956 126 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 H2AFB1P0C5Y9 115 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 LINC00694P0DN24 101 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 ERVFC1-1P60608 527 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 FAM74A4Q5TZK3 123 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 ATP6V0E2Q8NHE4 81 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 TCEAL7Q9BRU2 100 aa11.93□□□□□ -0.5
PNKP-230ENST00000638016 A0A087WTM6 91 aa11.92□□□□□ -0.5
PNKP-230ENST00000638016 TPT1P13693 172 aaKnown RBP11.92□□□□□ -0.5
PNKP-230ENST00000638016 LINC01556Q5JQF7 62 aa11.92□□□□□ -0.5
PNKP-230ENST00000638016 ZFP2Q6ZN57 461 aa11.92□□□□□ -0.5
PNKP-230ENST00000638016 SCRT2Q9NQ03 307 aa11.92□□□□□ -0.5
PNKP-230ENST00000638016 LELP1Q5T871 98 aa11.91□□□□□ -0.5
PNKP-230ENST00000638016 NFE4Q86UQ8 179 aa11.91□□□□□ -0.5
PNKP-230ENST00000638016 MAPKAPK5-AS1Q8N8E1 139 aa11.91□□□□□ -0.5
PNKP-230ENST00000638016 DERL1Q9BUN8 251 aa11.91□□□□□ -0.5
PNKP-230ENST00000638016 GTSF1LQ9H1H1 148 aa11.91□□□□□ -0.5
PNKP-230ENST00000638016 Q9HAA7 133 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms