RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 DEFB136Q30KP8 78 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 FAM104BQ5XKR9 115 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 OR11H2Q8NH07 326 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 SSBP4Q9BWG4 385 aaPredicted RBP4.24□□□□□ -1.73
CHD2-227ENST00000637572 ZNF702PQ9H963 129 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 D6R8Y8 96 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 HIST1H2BKO60814 126 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 HIST1H2BJP06899 126 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 HIST1H2BOP23527 126 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 HIST1H2BBP33778 126 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 HIST1H2BDP58876 126 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 HIST1H2BCP62807 126 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 HIST2H2BEQ16778 126 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 ANXA2RQ3ZCQ2 193 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.23□□□□□ -1.73
CHD2-227ENST00000637572 HIST1H2BHQ93079 126 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 HIST1H2BNQ99877 126 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 HIST1H2BMQ99879 126 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 VGLL1Q99990 258 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 LOC102724200A0A096LPH7 203 aaPredicted RBP4.23□□□□□ -1.73
CHD2-227ENST00000637572 A4D1N5 150 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 M0R2P5 195 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 SERF1AO75920 110 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 ZC2HC1AQ96GY0 325 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 MRPL36Q9P0J6 103 aaKnown RBP4.23□□□□□ -1.73
CHD2-227ENST00000637572 UQCR10Q9UDW1 63 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 KNCNA6PVL3 124 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 DAD1P61803 113 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 Q0VG73 95 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 JOSD1Q15040 202 aaPredicted RBP4.23□□□□□ -1.73
CHD2-227ENST00000637572 Q1RN00 199 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 SLC25A34Q6PIV7 304 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 NIT1Q86X76 327 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 C14orf178Q8N769 122 aaPredicted RBP4.23□□□□□ -1.73
CHD2-227ENST00000637572 C8orf49Q96NF6 230 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 PCSK5Q92824 1860 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 CRLF1O75462 422 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 FXYD7P58549 80 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 C16orf74Q96GX8 76 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 IGF2BP2-AS1Q96M15 143 aa4.23□□□□□ -1.73
CHD2-227ENST00000637572 LAMA1P25391 3075 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 ZZEF1O43149 2961 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 A0A087WX48 190 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 PRSS2P07478 247 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 NMUP48645 174 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 LBHQ53QV2 105 aaPredicted RBP4.22□□□□□ -1.73
CHD2-227ENST00000637572 C17orf77Q96MU5 243 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 C20orf78Q9BR46 151 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 AZU1P20160 251 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 SH2D6Q7Z4S9 175 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 CHCHD5Q9BSY4 110 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 CSTL1Q9H114 145 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 PAM16Q9Y3D7 125 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 DMDP11532 3685 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 LINC00587B1AMM8 73 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 CRPP02741 224 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 MAJINQ3KP22 176 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 ASPHD1Q5U4P2 390 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 LINC01006Q8NI28 216 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 IFI27L1Q96BM0 104 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 HIVEP1P15822 2718 aa4.22□□□□□ -1.73
CHD2-227ENST00000637572 LINC01548A6NM66 108 aa4.21□□□□□ -1.73
CHD2-227ENST00000637572 CD28P10747 220 aa4.21□□□□□ -1.73
CHD2-227ENST00000637572 SPATA45Q537H7 98 aa4.21□□□□□ -1.73
CHD2-227ENST00000637572 TMEM170BQ5T4T1 132 aa4.21□□□□□ -1.73
CHD2-227ENST00000637572 SERTAD4-AS1Q5TG53 156 aa4.21□□□□□ -1.73
CHD2-227ENST00000637572 CRYBG3Q68DQ2 2970 aa4.21□□□□□ -1.73
CHD2-227ENST00000637572 DLX4Q92988 240 aaPredicted RBP4.21□□□□□ -1.73
CHD2-227ENST00000637572 C16orf95Q9H693 158 aa4.21□□□□□ -1.73
CHD2-227ENST00000637572 DMRT1Q9Y5R6 373 aa4.21□□□□□ -1.73
CHD2-227ENST00000637572 DPM2O94777 84 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 UNQ9165/PRO28630Q6UXU0 137 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 AMN1Q8IY45 258 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 MRPS16Q9Y3D3 137 aaKnown RBP4.21□□□□□ -1.74
CHD2-227ENST00000637572 TRAV8-6A0A0B4J262 113 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 A0A0J9YX75 114 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 HLA-DRB4P13762 266 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 KLF5Q13887 457 aaPredicted RBP4.21□□□□□ -1.74
CHD2-227ENST00000637572 MORN5Q5VZ52 161 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 TMEM61Q8N0U2 210 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 OR5A1Q8NGJ0 315 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 HLA-DRB4X5D2U9 266 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 CELSR3Q9NYQ7 3312 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 K7EQG2 157 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 RHOHQ15669 191 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 LCE2CQ5TA81 110 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 Q8N8P6 123 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 MRAPQ8TCY5 172 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 DNAJC30Q96LL9 226 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 C18orf15Q96N68 181 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 SELENOKQ9Y6D0 94 aa4.21□□□□□ -1.74
CHD2-227ENST00000637572 I3L3M4 83 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 J3QR89 54 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 SCGB1C2P0DMR2 95 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 DEFB130BP0DP73 79 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 DEFB130AP0DP74 79 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 DEFB114Q30KQ6 69 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 TMEM141Q96I45 108 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 KLK9Q9UKQ9 250 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 DCHS1Q96JQ0 3298 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms